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172  structures 6770  species 6  interactions 15136  sequences 175  architectures

Clan: Acylphosphatase (CL0622)

Summary

Acylphosphatase/BLUF domain-like superfamily Add an annotation

This superfamily has a ferredoxin fold. It contains the BLUF domain and the acylphosphatase family.

This clan contains 4 families and the total number of domains in the clan is 15136. The clan was built by A Bateman.

Literature references

  1. Anderson S, Dragnea V, Masuda S, Ybe J, Moffat K, Bauer C;, Biochemistry. 2005;44:7998-8005.: Structure of a novel photoreceptor, the BLUF domain of AppA from Rhodobacter sphaeroides. PUBMED:15924418 EPMC:15924418

Members

This clan contains the following 4 member families:

Acylphosphatase BLUF DUF1115 UPF0176_N

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Acylphosphatase (PF00708) 7105 (46.9%) View
UPF0176_N (PF17773) 4121 (27.2%) View
DUF1115 (PF06544) 2149 (14.2%) View
BLUF (PF04940) 1761 (11.6%) View
Total: 4 Total: 15136 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 6 interactions for this clan. More...

Interacting families
A B
Acylphosphatase Acylphosphatase
Sua5_yciO_yrdC
zf-HYPF
BLUF BLUF
EAL
EAL BLUF

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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