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487  structures 2125  species 38  interactions 24323  sequences 276  architectures

Clan: 6PGD_C (CL0106)

Summary

6-phosphogluconate dehydrogenase C-terminal-like superfamily Add an annotation

This helical domain is found associated with Rossmann domains.

This clan contains 13 families and the total number of domains in the clan is 24323. The clan was built by A Bateman.

Members

This clan contains the following 13 member families:

3HCDH 6PGD ApbA_C DUF1932 DUF2520 HMD IlvC Mannitol_dh_C NAD_binding_11 NAD_Gly3P_dh_C Octopine_DH P5CR_dimer UDPG_MGDP_dh

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
3HCDH (PF00725) 4899 (20.1%) View
NAD_binding_11 (PF14833) 3347 (13.8%) View
UDPG_MGDP_dh (PF00984) 3261 (13.4%) View
NAD_Gly3P_dh_C (PF07479) 2444 (10.0%) View
P5CR_dimer (PF14748) 2375 (9.8%) View
ApbA_C (PF08546) 2157 (8.9%) View
IlvC (PF01450) 1882 (7.7%) View
6PGD (PF00393) 1822 (7.5%) View
Mannitol_dh_C (PF08125) 1206 (5.0%) View
DUF2520 (PF10728) 472 (1.9%) View
Octopine_DH (PF02317) 224 (0.9%) View
DUF1932 (PF09130) 205 (0.8%) View
HMD (PF03201) 29 (0.1%) View
Total: 13 Total: 24323 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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