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0  structures 71  species 0  interactions 578  sequences 5  architectures

Clan: Viral_NABP (CL0140)

Summary

Viral nucleic acid binding Add an annotation

This clan contains viral nucleic acid binding protein families. Two of the families in this clan are known to contain zinc finger motifs [1][2].

This clan contains 3 families and the total number of domains in the clan is 578. The clan was built by J Mistry.

Literature references

  1. Satyanarayana T, Gowda S, Ayllon MA, Albiach-Marti MR, Rabindran S, Dawson WO; , J Virol 2002;76:473-483.: The p23 protein of citrus tristeza virus controls asymmetrical RNA accumulation. PUBMED:11752137 EPMC:11752137
  2. Gramstat A, Courtpozanis A, Rohde W; , FEBS Lett 1990;276:34-38.: The 12 kDa protein of potato virus M displays properties of a nucleic acid-binding regulatory protein. PUBMED:2265707 EPMC:2265707

Members

This clan contains the following 3 member families:

Carla_C4 CTV_P23 Viral_NABP

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Viral_NABP (PF05515) 209 (36.2%) View
Carla_C4 (PF01623) 194 (33.6%) View
CTV_P23 (PF04808) 175 (30.3%) View
Total: 3 Total: 578 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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