Sequence alignment for CL0153

PF00692

DUT_HUMAN/121-250--------------------------------------------------------------------------------
DUT_ICHVA/62-187--------------------------------------------------------------------------------
DUT_EBVB9/119-240--------------------------------------------------------------------------------
DUT_SHV21/120-244--------------------------------------------------------------------------------
DUT_HAEIN/15-149--------------------------------------------------------------------------------
DUT_HHV11/206-337--------------------------------------------------------------------------------
DUT_YEAST/16-146--------------------------------------------------------------------------------
DUT_ECOLI/15-149--------------------------------------------------------------------------------
DUT_VZVD/225-354--------------------------------------------------------------------------------
DUT_SOLLC/39-168--------------------------------------------------------------------------------
F4B717_ACIHW/46-166--------------------------------------------------------------------------------
DUT_CANAL/28-157--------------------------------------------------------------------------------
DUT_VACCW/18-145--------------------------------------------------------------------------------
DUT_HHV6U/242-365--------------------------------------------------------------------------------
Q6TVW3_ORFSA/26-154--------------------------------------------------------------------------------
Q8V3S4_SWPV1/13-141--------------------------------------------------------------------------------
PRO_MMTVC/620-741--------------------------------------------------------------------------------
Q9TTD4_SHEEP/13-133--------------------------------------------------------------------------------

PF04797

LF2_EBVA8/37-401--FMRGVWKYEIFPSYVRVTNK-----QVLQLDAQCQE.....LPPCPSVGQILSF------KLPSFSFNTTT-YGSR.Y
VG10_EHV2/21-391--FFVENWKVEVTPAALTVVNT-----SEVPVQDPRCT..IITLPFSVWSA..MEC------MLCRFQPANQL-HVACKL
VG10_ALHV1/6-378--APMNMWSVRIVNGIFVLSNK-----KPLNLPAHLSQ...LNIPYSVHF...IVD------SLASFGLLSSL-FSLDQV
LF1_EBVB9/5-442--TDTQAWRVEIGTRGLMFSNC-----VPLHLPEGQYH....KLRLPVSAYEALA.------.VARYGLVGSL-WEVPAV
VG11_ALHV1/22-387--LQLSHWDFTIYDTYIKMTNI-----HHITTTSNDSC.....LPTCPPLAEILKD------KIPGYAFYSSA-WQCQ.T
VG11_SHV21/24-388--FNYSFWNCSVHEHFISITNN-----REIHILPDDLL.....LPRCPSIRAILFK------QIPSFKFSGSR-SGPP.G
VG11_EHV2/74-450--PGDPFWSFSVYATYVKVTNK-----IRFVPGMLADC....TLPYLPNLKNILAG------RYPNFHFTTTA-HGGN.L
ORF11_HHV8P/26-387--...PVWDSVIHPSHIVISNR-----VPLLLREQNIC.....LPSCPSVGQILHR------AYPNFTFDNTH-RKQQTE
ORF10_HHV8P/7-387--FILGDWEITVSNCRFTCSSL-----TCGPLYRSSGDYTRLRIPFSLDR...LIR------DHAIFGLVPNI-EDLLTH

PF06559

B0T2H0_CAUSK/6-336------------------------------------------------AAGILPCQ------SIEDLIAQEAI.TSQTPF
A6WVX6_OCHA4/5-363------------------------------------------------DAGILADA------DISALFESGLL.ASPRPL
A7ICI7_XANP2/10-371------------------------------------------------KPGILPAE------AISALKATGAI.SCRRPL
D9QL85_BRESC/7-337------------------------------------------------VPGILPCQ------SIEALIAGGAI.TSATPF
E3I262_RHOVT/9-354------------------------------------------------ASGILPSQ------AIAKLVAEGAI.AASAPI
S0EVQ5_CHTCT/8-380------------------------------------------------NNGVFPAQ------WIRQAFEKGWI.DAEEPL
U6B352_9RHIZ/4-360------------------------------------------------..VILPDK------SIVKLFDTGEI.ISELAL
E3F1H9_KETVY/2-356------------------------------------------------.TGVLPHT------QIQAMIDAAHI.RPERPL
Q0ASF2_MARMM/3-337------------------------------------------------DTGILPDH------HLAALAGRGIL.TTAAPL
J9ZEW7_LEPFM/2-359------------------------------------------------..GTLSDV------QISRLIDAGAI...VDPF
Q11M73_CHESB/3-361------------------------------------------------STGILPDK------EIAALFEAGAL.AAPRPL
Q1GI72_RUEST/2-356------------------------------------------------.TGVLPSQ------TIETMLARADI.KIDAPL
I0IM71_LEPFC/2-351------------------------------------------------..GTLSDR------EILGLVAEGHI..RSRRY
F8J4V2_HYPSM/17-374------------------------------------------------AVGILPSQ------AISHMIADGEI.VLAEPP
D5BMT1_PUNMI/8-370------------------------------------------------NDGILPVQ------ALRAAADAGIILSGDNDF
A1B368_PARDP/7-360------------------------------------------------VNGVLPDT------SLRQLIASGAI.SADQPI
E0TCQ3_PARBH/11-366------------------------------------------------PLGVFAED------DLAALVAAETI.TLSAQC
F2IY64_POLGS/9-367------------------------------------------------PEGILPAH------MIEDMFRNGAI.RSETPL
D5AUM0_RHOCB/3-361------------------------------------------------.HGVLPDS------ALRAMIARGEI.AAARPV
Q28RG4_JANSC/9-360------------------------------------------------PQGVLPDH------AISAMIESGAI.TATMPV
W8S3S8_9RHOB/5-358------------------------------------------------VSGVLPDH------RLRAMIDAGQI.TADRPV
V5SAL4_9RHIZ/10-372------------------------------------------------ADGILPAQ------AIRALAEAGGI.TPSEPF
M9RD28_9RHOB/2-357------------------------------------------------KNGVLSDT------QISALIDGGAI.TASAGF
C6XMA9_HIRBI/10-342------------------------------------------------PIGVLPDT------QIQSLCDSEVI.SSVDGL
Q0BYT8_HYPNA/2-334------------------------------------------------.SGVIPDF------EIEALLQSGAI.RCDEAP
Q3J368_RHOS4/2-356------------------------------------------------.AGVLASQ------RIRSLIASGAI.AADIPP
B8IN71_METNO/5-360------------------------------------------------RDGIQSAE------SIAALHAAGVI.RTEAPF
A8ILD7_AZOC5/12-371------------------------------------------------KAGILPAQ------AIAALVESGGI.STRRAL
V9TRV1_9PROT/16-380------------------------------------------------TSGIMPYQ------EIKRMIKGGQI.KCAIPF
G8PHJ6_PSEUV/2-361------------------------------------------------.TGILPAK------AIEAMFANNAI.KADRAP
B2III7_BEII9/27-392------------------------------------------------QFGLLPRQ------KIEVMVRRGMI.MSPE.L
I7DZH0_PHAIB/12-367------------------------------------------------TQGVLSDR------QIRQMITGAAI.AASSPI
D8PJ22_9BACT/7-382------------------------------------------------SKGILPYQ------HITQLIARRSI.TSEHPI
G4R8T6_PELHB/6-364------------------------------------------------PTGVFSAR------LIQNLSDEGAI.SAGRPY
M4Q6K7_LIBAS/2-364------------------------------------------------NKGVLPDK------AIATLAERGDI.VSEHPL
Q92S94_RHIME/4-363------------------------------------------------DTGILADR------AIAALYASGRL.KSEKVL
B8ELJ2_METSB/17-383------------------------------------------------.FGLLSRQ------KIELMATRRMI.QAADAL
Q3SWD3_NITWN/9-367------------------------------------------------ANGILPDR------MIAAMADAGLI.LPEYPF
D7A3W4_STAND/8-367------------------------------------------------GEGILPGH------AIQALADRGSI.RIARPF
J7Q6T1_METSZ/2-364------------------------------------------------.GGVLSSR------QIQAMADAGQI.RLAAPL
C5B418_METEA/18-375------------------------------------------------.PGTQPDS------AIRLMASSGLL.TAREPL
Q6G4R3_BARHE/4-362------------------------------------------------LSGILADS------DIQALIDNNFL.KALWPF
C5AS03_METEA/8-364------------------------------------------------ASGILPAQ------AITALTQAGAI.RPATAY
A7HQ50_PARL1/26-383------------------------------------------------ATGILPSH------GIQALIREKEI.WGGLEI

PF06284

UL84_HCMVM/1-586--MPRVDPNLRNRARRPRARRGGGGGVGSNSSRHSGKCRRQRRALSTPPLTFLATTTTTTMMGVASTDDDSLLLKTPDEL

PF06501

VU55_HHV6U/3-432--SPQLNHVLQLVFDCNH.IVS-----N.SYQEIILKCRISS----TKPGILFITD------GTESETEDVLFDVQF---
V55B_HHV7J/5-430--TSDILKYVQIEIPYKEEFQG-----KDNVTLLFDEYVQSK----TEPVLLLSAE------.INSRNSDSFFSARP---
O56289_9BETA/6-427--VSELSQLIQFTVDFND.LQP-----ELNFSPAEITCILSH----ERPVLLLITD------GTENNAECVTLVGHV---

PF05784

VU54_HHV6U/4-339ATLQWSSYVLQLRV.TTTAILK-----PGELRLFKCGLGITP----PSSAVVCICR------DESSFTSSP.........
PP71_HCMVM/28-371SFGRLHCQVLRLITNVEGGSLE-----AGRLRLLDLRTNIEV----SRPSVLCCFQ------EN.KSPHDTVDLTDLNIK
PP65_HCMVM/15-357.LGPISGHVLKAVFSRGDTPVL-----PHETRLLQTGIHVRV----SQPSLILVSQ------YTPDSTPCHRGDNQLQVQ

PF00692

DUT_HUMAN/121-250--------------------------------EHATAPTRGSA-----RAAGYDL-----------YSAYD--YTIP---
DUT_ICHVA/62-187--------------------------------ADVSIPKISSP-----GSAGFDL-----------SVLED--REFI---
DUT_EBVB9/119-240--------------------------------DKGPINHPQYP-----GDVGLDV-----------SLPKD--LALF---
DUT_SHV21/120-244--------------------------------DYSDLCPPRYS-----KDAGFDL-----------YLPTD--VTVK---
DUT_HAEIN/15-149--------------------------------NEFPLPTYATE-----GSAGLDL-----------RALID--ESFE---
DUT_HHV11/206-337--------------------------------REAIAFLPKRE-----EDAGFDI-----------VVRRP--VTVP---
DUT_YEAST/16-146--------------------------------ASATVPTKGSA-----TAAGYDI-----------YASQD--ITIP---
DUT_ECOLI/15-149--------------------------------KEFPLPTYATS-----GSAGLDL-----------RACLN--DAVE---
DUT_VZVD/225-354--------------------------------TYKHIINPKRQ-----EDAGYDI-----------CVPYN--LYLK---
DUT_SOLLC/39-168--------------------------------ENAVLPSRASS-----LAAGYDL-----------SSAAE--TKVP---
F4B717_ACIHW/46-166--------------------------------.TDEIYEDGKD-----PRSFYEI-----------EKGDE--FIIY---
DUT_CANAL/28-157--------------------------------..GKVPTKGSA-----LAAGYDL-----------YSAEA--ATIP---
DUT_VACCW/18-145--------------------------------.RAKSPTRQSP-----YAAGYDL-----------YSAYD--YTIP---
DUT_HHV6U/242-365--------------------------------.PWEMINLSPP-----EFAIFHL-----------KASRE--FIAK---
Q6TVW3_ORFSA/26-154--------------------------------.NATIPTRGSP-----GAAGLDL-----------CSAYD--CVVP---
Q8V3S4_SWPV1/13-141--------------------------------.NAIIPNRSTS-----GSAGYDL-----------YSAYS--YTVK---
PRO_MMTVC/620-741--------------------------------..IHDLPRGTP-----GSAGLDL-----------SSQKD--LILS---
Q9TTD4_SHEEP/13-133--------------------------------..IADLCRATR-----GSAGLDL-----------CATSY--TVLT---

PF04797

LF2_EBVA8/37-401FT-----VAFLFFGA....E--------DNEVFLKPFFVMHSD-----QDIVLSV-----------LNPRS--LFIE---
VG10_EHV2/21-391FD-----TTFILQNQ..DLD--------QSRYVVVETVVSDLK-----KPISFSL-----------VSEGR--A.LA---
VG10_ALHV1/6-378KQ-----SCALLVQH...KP--------NDQCTVLPTCVLDLE-----FDITVYV-----------RSRQR--V.LQ---
LF1_EBVB9/5-442NS-----ALQCLAAA...AP--------CKDVKIYPSCIFQVH-----APMFVTI-----------KTSLR--C.LN---
VG11_ALHV1/22-387MW-----MRFLIFGD....E--------DNCIKTQLMFIDRSA-----ENINIRL-----------QHASY--QMAP---
VG11_SHV21/24-388TV-----TSLYVYGH....S--------KNLIKIKPMVVSECE-----QELIFKI-----------TFALE--CTIP---
VG11_EHV2/74-450SE-----VAFLAVEC....P--------RNPVRAAPTVVRCSL-----NEIAISL-----------MRPLE--GPVP---
ORF11_HHV8P/26-387TY-----TAFYAFGD....Q--------NNKVRILPTVVESSS-----SVLIFRL-----------RASVS--ANIA---
ORF10_HHV8P/7-387GS-----CVAVVADANATGG--------NARRIVAPGVINNFS-----EPIGIWV-----------RGPPP--Q.TR---

PF06559

B0T2H0_CAUSK/6-336DT.....DQVQPASLDLRLG--------ARCWRVRASFLPGVA-----RRVPERL.......KD..VAMHE..LDLT---
A6WVX6_OCHA4/5-363DP.....DQIQPASLDLRLG--------AKAYRVRASFMPGPG-----TPVLEKL.......ER..LKLHE..IDLT---
A7ICI7_XANP2/10-371DA.....DQIQPASLDLRLG--------RTAWRVRASFLPGAG-----VSVKERL.......AD..LALHD..FDLA---
D9QL85_BRESC/7-337DA.....DQVQPASLDLRLS--------DRAWRVRASFLPGQ.-----RLVADRI.......AD..VSMHS..IDLS---
E3I262_RHOVT/9-354GE.....GQIQPASLDLRLG--------RRAFRVRASFIPGPG-----TKTEDQI.......ER..FKLHT..IDLG---
S0EVQ5_CHTCT/8-380RS.....GQIQPNSLDLRLG--------TVGYRVQCSFLPG.E-----EGMAQKL.......AR..FGWYR..FCLP---
U6B352_9RHIZ/4-360DF.....DQIQPASLDLRLS--------SKGYQVRAAFLPNDG-----YNVLDKI.......EM..FGLNE..FDLS---
E3F1H9_KETVY/2-356AP.....GQLQPASLDLRLG--------TVAYRVRASFLAGTG-----RSVADRL.......AA..FEMHR..VDLT---
Q0ASF2_MARMM/3-337AD.....GQVQPASIDLRLG--------SKAWRLRASFLPGPG-----RTVAERLD......DD..LVMHT..VDLT---
J9ZEW7_LEPFM/2-359EGRDALLSRVQPASLDLALG--------QTAYRIRSSFLP.QG-----DSVSRLL.......PE..LSLYP..VDLS---
Q11M73_CHESB/3-361DS.....DQIQPASLDLRLG--------DVAYRVRASFLPGPG-----SRVEEKL.......ER..LKLHE..IPLG---
Q1GI72_RUEST/2-356SE.....GQIQPASLDLRLG--------KVAYRVRASFLAGQG-----RTVAERL.......EE..FEMHR..IDLS---
I0IM71_LEPFC/2-351KK.....FEVQPASLDLRLG--------SIAYRVRSSFLP.QG-----ESVQTLL.......PE..MTLYQ..IDLN---
F8J4V2_HYPSM/17-374AE.....GQVQPASLDLRLG--------AVAYRVRASFLPRPG-----GKVQGKL.......DE..LALHT..ISLS---
D5BMT1_PUNMI/8-370ID.....GQLQPASLDLRLG--------AEAWRVQASFLPGAD-----STVAQKL.......DK..FAMHK..IDLS---
A1B368_PARDP/7-360LP.....EQVQPASLDLRLG--------ATAWRLRASFLAGRG-----RKVSDRL.......RD..FEMHR..MDLT---
E0TCQ3_PARBH/11-366GE.....CQIQPASFDLTLG--------QRAWRIRAAFLPGPA-----RSVKSCL.......DE.GLGLHV..LDLT---
F2IY64_POLGS/9-367VD.....GQIQPASLDLRLG--------TKAYRVRASFLPGPG-----VTVADRL.......DA..LRLHT..VDLA---
D5AUM0_RHOCB/3-361TP.....EQIQPASLDLRLG--------EVAYRIRASFLAGRG-----QRVETKL.......SD..FEMHR..MRLS---
Q28RG4_JANSC/9-360PD.....GQIQPASLDLRLG--------TKAYRVRASFLTGAG-----RSVAERL.......PE..FTMHE..MDLT---
W8S3S8_9RHOB/5-358TA.....QQIQPASLDLRLG--------HVAYRVRASFLAGKG-----NRLSDRL.......TE..FEMHR..MDLR---
V5SAL4_9RHIZ/10-372GQ.....GQVQPASVDLRLG--------ARAHRVRASFLPGPG-----GAVAEKL.......DD..LTLHT..FDLE---
M9RD28_9RHOB/2-357EL.....GQVQPASLDLRLG--------HVAYRVRASFLTGRG-----QSVTDRL.......AQ..FTMHE..IDLT---
C6XMA9_HIRBI/10-342AN.....DQVQPASIDLRLG--------KTAYRMRASFLPGLG-----KKVSDYFN......DD..LVMHE..LDLT---
Q0BYT8_HYPNA/2-334EP.....GQIQPASLDLRLA--------VDAYRLRASFLPGKD-----RTVAEML.......QEPGIHLHR..VDLT---
Q3J368_RHOS4/2-356IA.....GQIQPASLDLRLG--------RVAYRVRASFLAGAG-----RSVKDRL.......AE..FEMHR..VDLT---
B8IN71_METNO/5-360AD.....DQVQPASLDLRLG--------RKAYRVRASFLPGRL-----RDVTACL.......AK..LKLHE..IDLR---
A8ILD7_AZOC5/12-371DD.....DQIQPASLDLRLG--------RTAWRIRASFLPGAG-----NTVKDRL.......SE..LVLHK..LDLS---
V9TRV1_9PROT/16-380DS.....SQIQPASLDLRLG--------RLAYQVRASFLPGLS-----AAVMDKI.......AQ..LDGGDPVLDLL---
G8PHJ6_PSEUV/2-361DG.....DQIQPASLDLRLG--------AKAWRVRASFLPGPD-----ARVEEKL.......DK..LILHE..IDLS---
B2III7_BEII9/27-392DN.....GQIQPASLDLRLG--------PKAYRIRASFLPGKD-----RTVEGQL.......AN..LNSEE..ISLE---
I7DZH0_PHAIB/12-367LN.....DQIQPASLDLRLS--------DCAYRVRASFLPGLG-----RTVAERL.......ED..LTMHR..VALT---
D8PJ22_9BACT/7-382ED.....RQIQPASLDLRLG--------KKAYRLISSFLP.EL-----SAISSRLNVLDFYQSD..LVMYE..MDLT---
G4R8T6_PELHB/6-364DP.....DQIQPASLDLRLG--------ETAFRVRSSFLPGPG-----KTVTERI.......ET..LKLHE..IDLT---
M4Q6K7_LIBAS/2-364EK.....NQIQPASIDLRLS--------SKAYRVRASFLPNID-----GLVSDKI.......KH..FKLRE..IDLS---
Q92S94_RHIME/4-363DD.....DQIQPASLDLRLG--------SKAFRVRASFMPGPS-----HLVADKL.......DR..LKLHV..VDLS---
B8ELJ2_METSB/17-383DE.....RQLQPASLDLRLG--------ARAYRVRASFLPGRE-----RTVMEQL.......RA..FARDEDAISLE---
Q3SWD3_NITWN/9-367VE.....SQIQPASLDLRLG--------ATAYRVRASFLPGPD-----ATVAERI.......DE..LKLHE..IDLS---
D7A3W4_STAND/8-367DA.....DQVQPASLDLRLG--------PTAWRIRASFLPGPS-----ETVAERL.......KR..LSLHE..LDLT---
J7Q6T1_METSZ/2-364AH.....GQIQPASLDLRLG--------PKAFRVRASFLPGKR-----RGVDELL.......SA..LKYDE..MSLE---
C5B418_METEA/18-375LD.....SQIQPASVDLRLG--------ARAWRVRASFLPGSG-----ATVEERI.......AR..HGLFE..IDLT---
Q6G4R3_BARHE/4-362DA.....AQIQPASLDLRLG--------EKAYRIRASFMPGAD-----VRVLDKL.......ER..LKLHE..FDLR---
C5AS03_METEA/8-364AA.....DQIQPASLDLRLG--------RRAYRVRTSFLPGSG-----RSVATCV.......EA..FALHE..IDLT---
A7HQ50_PARL1/26-383DP.....AQIQPASLDLRLG--------ATAYRLRASFLPGPD-----HGVMERV.......EE..LMLHK..IDLT---

PF06284

UL84_HCMVM/1-586DKHSGSPQTILTLTDKHDIRQPRVHRGTYHLIQLHLDLRPEELRDPFQILLSTPLQLGEANGESQTAPATS--QEEETAA

PF06501

VU55_HHV6U/3-432------------LEKTTTIK--------IKILPISRTV.PVRI-----HLFSIPIYL----------PSHA--LEID---
V55B_HHV7J/5-430------------LMEEQQLK--------LHLKNLNRHIYPSKV-----LFFGFPLLK----------INSS--IVII---
O56289_9BETA/6-427------------LKNKKVIK--------INVFPMIQSI.NF.V-----NIFALPIFN----------ITSS--LLIQ---

PF05784

VU54_HHV6U/4-339FTYIDPKDYGNIPFAVQNIS--------DLDLDLSR..LPIVL-----NIFALPHAN---------VNISN--LPVQ---
PP71_HCMVM/28-371GRCVVG.EQDRLLVDLNNFG--------PRRLTPGSENNTVSV-----LAFALPLDR---------VPVSG--LHLF---
PP65_HCMVM/15-357HTYFTGSEVENVSVNVHNPT--------GRSICPSQ..EPMSI-----YVYALPLKM---------LNIPS--INVH---

PF00692

DUT_HUMAN/121-250---------------------------------------P..MEKAVVKTDIQIAL------------------------
DUT_ICHVA/62-187---------------------------------------R..GCHYRLPTGLAIAV------------------------
DUT_EBVB9/119-240---------------------------------------P..HQTVSVTLTVPPP.------------------------
DUT_SHV21/120-244---------------------------------------P..RVPNRYSVNICCPA------------------------
DUT_HAEIN/15-149---------------------------------------IQPGETKLIPTGLSIYI------------------------
DUT_HHV11/206-337---------------------------------------A.NGTTVVQPSLRMLHA------------------------
DUT_YEAST/16-146---------------------------------------A..MGQGMVSTDISFTV------------------------
DUT_ECOLI/15-149---------------------------------------LAPGDTTLVPTGLAIHI------------------------
DUT_VZVD/225-354---------------------------------------RNEFIKIVLPIIRDWDL------------------------
DUT_SOLLC/39-168---------------------------------------A..RGKALVPTDLSIAV------------------------
F4B717_ACIHW/46-166---------------------------------------P..NEHVLLVTEEYVKL------------------------
DUT_CANAL/28-157---------------------------------------A..HGQGLVSTDISIIV------------------------
DUT_VACCW/18-145---------------------------------------P..GERQLIKTDISMSM------------------------
DUT_HHV6U/242-365---------------------------------------P..NSYTIQYFDAMYVC------------------------
Q6TVW3_ORFSA/26-154---------------------------------------S..HCSCVVFTDLLIKL------------------------
Q8V3S4_SWPV1/13-141---------------------------------------P..YNRILVRTDICLMI------------------------
PRO_MMTVC/620-741---------------------------------------L.EDGVSLVPTLVKGTL------------------------
Q9TTD4_SHEEP/13-133---------------------------------------P.EMGVQTLATGVFGPL------------------------

PF04797

LF2_EBVA8/37-401---------------------------------------KGKFTWYIVPIRLVKNPYLYLQIL--PGQSDIQL..TRSCT
VG10_EHV2/21-391---------------------------------------EGELRLVLTPLRALDYVHVFSVIY--NMHNE.....LPPGL
VG10_ALHV1/6-378---------------------------------------PGALQLALIFIKPVNGSEMAWDVR--DPPETMVGQRLYENV
LF1_EBVB9/5-442---------------------------------------PHDLCLCLICVGAAILDIPLLCAP--RDG.......AGARA
VG11_ALHV1/22-387---------------------------------------AHSLVFYIFPIILLRLDGLYLRVL--PDKHPGVM..DASCS
VG11_SHV21/24-388---------------------------------------PGSMEIFILPITFLKLDGLYLLCL--EDYTSRIM..STSCM
VG11_EHV2/74-450---------------------------------------AGGLTFYLLPVTLVKPHGLYLKIQ--KDRAAVGA..ATTCS
ORF11_HHV8P/26-387---------------------------------------VGGLKIIILALTLVHAQGVYLRCG--KDLSTPHC..APAIV
ORF10_HHV8P/7-387---------------------------------------KEAIKFCIFFVSPLPPREMTTYVF--KGGDLPPGAEEPETL

PF06559

B0T2H0_CAUSK/6-336----------------------------------.KGAVLEKGCVYIAEIQERLALPGNIAAR--GNPKSSTGRVDVFVR
A6WVX6_OCHA4/5-363----------------------------------.AGAVLETGCVYIVPLLEGLALSADLSAS--ANPKSSTGRLDIFTR
A7ICI7_XANP2/10-371----------------------------------.KGAVLETGCVYLVELFERLKLPFDLAAA--ANPKSSTGRLDVFVR
D9QL85_BRESC/7-337----------------------------------.GGYVLEKGCVYIAELQERLSLPKGLIAR--ANPKSSTGRVDVFVR
E3I262_RHOVT/9-354----------------------------------.PGAVLEVGCVYVAEIDESLALPLFLSGI--ANPKSSTGRLDVFTR
S0EVQ5_CHTCT/8-380----------------------------------EEGVVLERNQVYIFPLMERLALPQNVRGR--ANPKSTTGRLDVFCR
U6B352_9RHIZ/4-360----------------------------------.DGVTLNTNCIYIIPLMESLCLRDDISAY--VNPKSSTGRIDVFVR
E3F1H9_KETVY/2-356----------------------------------.EGAVLEKGCVYVVPLMEELALPADVSAV--ANAKSSTGRLDLLTR
Q0ASF2_MARMM/3-337----------------------------------.AGAVLETGCVYLAPLQEGLKLPAGLSAA--MNPKSSTGRIDVFTR
J9ZEW7_LEPFM/2-359----------------------------------.THPYLEKGAVYLIPLSEQLSLPPGVEGK--TNPKSSTGRVDVFTR
Q11M73_CHESB/3-361----------------------------------.EGAVLETGCVYIVPLMEGLVLPADVSAS--ANPKSSTGRLDIFTR
Q1GI72_RUEST/2-356----------------------------------.EGAVLEKGCVYVVPLMEALDLPDTVSAV--ANAKSSTGRLDLLTR
I0IM71_LEPFC/2-351----------------------------------.SHPYIEPGAIYIIPLDESLSLPATVGGK--ANPKSSTGRIDVFTR
F8J4V2_HYPSM/17-374----------------------------------.QGAVLETGCVYIVPLLETLALPADIEAS--ANPKSSTGRLDVFTR
D5BMT1_PUNMI/8-370----------------------------------.AGAVLERGCVYIVKLQESLALSADLSAM--ANPKSSTGRLDIFTR
A1B368_PARDP/7-360----------------------------------.DGAVLEKGCVYLVPLMERLTLPAGLDAV--ANAKSSTGRLDLLTR
E0TCQ3_PARBH/11-366----------------------------------.DGAVLETGCVYLVELREGLALPPTLSAR--ANPKSSTGRIDVFVR
F2IY64_POLGS/9-367----------------------------------.HGAVLETGCVYIVPLQEVLDLPAIISAT--ANPKSSTGRLDVFTR
D5AUM0_RHOCB/3-361----------------------------------.EGAVLEKGCVYLVPLMERLALPAGLTAV--SNAKSSTGRLDLLTR
Q28RG4_JANSC/9-360----------------------------------.HGAVLEKGCVYVVPLMEGLALPGDITAV--CNAKSSTGRVDCLTR
W8S3S8_9RHOB/5-358----------------------------------.EGAVLEKGCVYVVPLMEGLALPAGVSAV--ANAKSSTGRVDCLTR
V5SAL4_9RHIZ/10-372----------------------------------.DGAVLETGCVYVVPLLEWLALPSGIAAS--ANPKSSTGRLDVFTR
M9RD28_9RHOB/2-357----------------------------------.DGAVLEKNCVYVVPLLESLALPDTMTAA--ASAKSSTGRLDLLTR
C6XMA9_HIRBI/10-342----------------------------------.KGTVLETGCVYLVPLKEVLNLPEGLSGA--ANPKSSTGRIDVFVR
Q0BYT8_HYPNA/2-334----------------------------------QEGAVLETGCVYLVPLQESLRLPAGLSAR--ANPKSSTGRIDVFTR
Q3J368_RHOS4/2-356----------------------------------.QGAVLEKGCVYVIPLMESLALPPGVSAV--ANAKSSTGRLDLLTR
B8IN71_METNO/5-360----------------------------------.QGAVLETGCVYIAELQEGLALPPDLAAS--ANPKSSTGRIDVFTR
A8ILD7_AZOC5/12-371----------------------------------.DGAVLETGGVYLVPLFERLRLPIDVAAS--TNPKSSTGRLDVFTR
V9TRV1_9PROT/16-380----------------------------------.KGAVLKRGCVYIIEILETLNLPHDVEAL--ANTKSSIGRLDILTR
G8PHJ6_PSEUV/2-361----------------------------------.KSAVLETNCVYIVQLQEALNLPDDLSAT--ANPKSSTGRIDVFTR
B2III7_BEII9/27-392----------------------------------GHGAVLERGCVYVIPLLESLKLPESISAI--ANPKSSTGRLDIFTR
I7DZH0_PHAIB/12-367----------------------------------.GGAVLEKGCVYVVPLMERIRLPEGMTAA--ASAKSSIGRLDVMTR
D8PJ22_9BACT/7-382----------------------------------.QGAILEKGHVYLVPLLEQLDLPATLRAR--ANPKSTTGRLDVFTR
G4R8T6_PELHB/6-364----------------------------------.KGAVLERGCVYIVPLLESLDLPETVSAS--ANPKSSTGRLDIFTR
M4Q6K7_LIBAS/2-364----------------------------------.GGTVLDANCVYIVPLMESLNLKNGISAY--ANPKSSIGRIDVFAR
Q92S94_RHIME/4-363----------------------------------.EGAVLETGCVYIVPLMESLSLPADMSAS--ANPKSSTGRLDIFTR
B8ELJ2_METSB/17-383----------------------------------.QGAVLERGCVYVIPLIEHLRLPDSIAAF--ANPKSSTGRLDIFTR
Q3SWD3_NITWN/9-367----------------------------------.DGAVLETNCVYIVPLLESLALPPEIVAA--ANPKSSTGRLDVFTR
D7A3W4_STAND/8-367----------------------------------.SGEVLETGCVYLVELEEALALPSDIAAS--TNPKSSTGRLDVFTR
J7Q6T1_METSZ/2-364----------------------------------GDGAVLERGCFYVVPLLESLALGDAVLGA--ANPKSSTGRLDIFTR
C5B418_METEA/18-375----------------------------------.NGADLETGCVYVAELQERIALPSTMRGI--ANAKSSTGRLDVFTR
Q6G4R3_BARHE/4-362----------------------------------.DGAVLETGCVYIVPLLENLALPEILSAI--ANPKSSTGRLDIFTR
C5AS03_METEA/8-364----------------------------------.QGAVLETGCVYIAELQETLALPPDLSAS--ANPKSSTGRIDVFTR
A7HQ50_PARL1/26-383----------------------------------.DGAVLETGCVYLVPLVEALALSERTSAS--ANPKSSTGRLDVFTR

PF06284

UL84_HCMVM/1-586SHEPEKKKEKEEKKEEEDEDDRNDDRERGILCVVSNEDSDVRPAFSLFPARPGCHILRSVIDQQLTRMAIVRLSLNLFAL

PF06501

VU55_HHV6U/3-432--------------------------DINALCQKENIDPTVYEQYGLTNMPISTTNVINQFKV--VQNDSVEMSLILFNL
V55B_HHV7J/5-430--------------------------P........NHDVKEQEQMGVFPSLIRFKNEKVIVTQ--TPHKVNEITVTMFNI
O56289_9BETA/6-427--------------------------DNCYF..KENMDPLRFHQFAYLEKGLGTTPII..LYS--VKNGDLIVNATVTKI

PF05784

VU54_HHV6U/4-339-------------------------------------RIE.AHDRHIIPHGQCDAKFVI------YG.PLTRIKIQVADI
PP71_HCMVM/28-371-------------------------------------QSQRRGGEENRPRMEARAIIRR------T.AHHWAVRLTVTP.
PP65_HCMVM/15-357-------------------------------------HYPSAAERKHRHLPVADAVIHA------SGKQMWQARLTVSGL

PF00692

DUT_HUMAN/121-250-----------PS.G------CYGRVAPRSGLAAK---------------------------------------------
DUT_ICHVA/62-187-----------PR.G------YVGIITPRSS.QAK---------------------------------------------
DUT_EBVB9/119-240-----------SIPH------HRPTIFGRSGLAMQ---------------------------------------------
DUT_SHV21/120-244-----------QLKS------YKPVLFGRSGLAAK---------------------------------------------
DUT_HAEIN/15-149-----------ADPN------LAAVILPRSGLGHK---------------------------------------------
DUT_HHV11/206-337-----------DAGP------AACYVLGRSSLNAR---------------------------------------------
DUT_YEAST/16-146-----------PV.G------TYGRIAPRSGLAVK---------------------------------------------
DUT_ECOLI/15-149-----------ADPS------LAAMMLPRSGLGHK---------------------------------------------
DUT_VZVD/225-354-----------QHPS------INAYIFGRSSKSRS---------------------------------------------
DUT_SOLLC/39-168-----------PQ.G------TYARIAPRSGLAWK---------------------------------------------
F4B717_ACIHW/46-166-----------PN.D------VMAFVNLRSSFARL---------------------------------------------
DUT_CANAL/28-157-----------PI.G------TYGRVAPRSGLAVK---------------------------------------------
DUT_VACCW/18-145-----------PK.F------CYGRIAPRSGLSLK---------------------------------------------
DUT_HHV6U/242-365-----------AD.E------LKALMIPSKEIAKL---------------------------------------------
Q6TVW3_ORFSA/26-154-----------PP.G------CYGRIAPRSGLAVK---------------------------------------------
Q8V3S4_SWPV1/13-141-----------PD.K------CYGRISPRSGLSLN---------------------------------------------
PRO_MMTVC/620-741-----------PE.G------TTGLIIGRSSNYKK---------------------------------------------
Q9TTD4_SHEEP/13-133-----------PP.G------TAGLLLGRSSASLK---------------------------------------------

PF04797

LF2_EBVA8/37-401QSGDKLNTSE.PQIF------LSGSPVTSQDEC.L---------------------------------------------
VG10_EHV2/21-391ELASVTEYCGSLVKE------LCGTAIRTRANTYT---------------------------------------------
VG10_ALHV1/6-378SQGTVKALETPDHLL------LTGEAIGRSDGTYD---------------------------------------------
LF1_EBVB9/5-442AEGQAAAAQG.GKLR------VWGRLSPSSPTSLS---------------------------------------------
VG11_ALHV1/22-387QTWSCLNTPM.PVVR------LQGGMLSWDDED.M---------------------------------------------
VG11_SHV21/24-388QMGTYLASET.PQVF------LKGGPVLNKHEP.M---------------------------------------------
VG11_EHV2/74-450QDGAHLNSEQ.PQVF------FSGTAAPAREGGEL---------------------------------------------
ORF11_HHV8P/26-387QREVLSSGFE.PQFT------VTGIPVTSSNLNQC---------------------------------------------
ORF10_HHV8P/7-387HSAEAPLPS..RETL------VTGQLRSTSPRTYT---------------------------------------------

PF06559

B0T2H0_CAUSK/6-336LLSDHSKAFDDIEAG------YEGPLYIEIAPQTF---------------------------------------------
A6WVX6_OCHA4/5-363VIADGAQEFDKVPAG------YNGPLYLEVSPRTF---------------------------------------------
A7ICI7_XANP2/10-371VITDGARAFDTIPAG------YNGPLYLEISPRTF---------------------------------------------
D9QL85_BRESC/7-337LLTDRGGSFDDVDEG------YEGPLYLEIAPQTF---------------------------------------------
E3I262_RHOVT/9-354VIADHGPGFDQTGAG------YKGRLWLEICPQTF---------------------------------------------
S0EVQ5_CHTCT/8-380LVTEHGVAFDETPQG------YQGPLYLEVVPRSF---------------------------------------------
U6B352_9RHIZ/4-360VIADKSREFDRIPAG------YKGNLYLEVSPRTF---------------------------------------------
E3F1H9_KETVY/2-356TITDGGAEFDRVPAG------YSGPLYAEICPRSF---------------------------------------------
Q0ASF2_MARMM/3-337VITDHGVAFDQAPVG------YEGPLYAEISPCTF---------------------------------------------
J9ZEW7_LEPFM/2-359VLTEKTHRFDDIPPG------YKGHLYLEVFSRSF---------------------------------------------
Q11M73_CHESB/3-361VMTDHGQEFDKIAAG------YSGPLYLEVSPRTF---------------------------------------------
Q1GI72_RUEST/2-356TITDGGEEFDRIRAG------YTGPLYAEICPRSF---------------------------------------------
I0IM71_LEPFC/2-351VLTENGHRFDDVPYG------YNGPLYLELFSRSF---------------------------------------------
F8J4V2_HYPSM/17-374VIADGVGAFDQIPRG------YHGPLYAEICPQTF---------------------------------------------
D5BMT1_PUNMI/8-370LITDNALEFETVSKG------YHGPLYAEISPRTF---------------------------------------------
A1B368_PARDP/7-360LVTDEGTEFDRLPQG------YDGPIYAEICPRSF---------------------------------------------
E0TCQ3_PARBH/11-366LVTDDGTAYDEVPAG------YTGPLYAEVSPRTF---------------------------------------------
F2IY64_POLGS/9-367VITDDARAFDTVGAG------YSGPLYAEISPLTF---------------------------------------------
D5AUM0_RHOCB/3-361VITDDGTEFDRIPEG------YTGPLYAEICPRSF---------------------------------------------
Q28RG4_JANSC/9-360VIADGGVEFDRIPAG------YTGPLYAEICPRSF---------------------------------------------
W8S3S8_9RHOB/5-358VITDGGTEFDRIAPG------YAGPLYAEICPRSF---------------------------------------------
V5SAL4_9RHIZ/10-372VIADGVTAFDQVPAG------YRGPLYAEICPQTF---------------------------------------------
M9RD28_9RHOB/2-357IITDNGVEFDRVPKG------YAGPLFVEICPRSF---------------------------------------------
C6XMA9_HIRBI/10-342MITDGSDRFDAARAG------YSGPLYVEISPRTF---------------------------------------------
Q0BYT8_HYPNA/2-334LVTNRSRAFDEVPMG------YSGPLYLEVSPRTF---------------------------------------------
Q3J368_RHOS4/2-356TIADGGTEFDRIRDG------YHGPLYAEVCPRSF---------------------------------------------
B8IN71_METNO/5-360VITDQAREFDMVEPG------YAGPLFAEISPRTF---------------------------------------------
A8ILD7_AZOC5/12-371VIADGARAFDAIPMG------YAGPLYLEIAPRTF---------------------------------------------
V9TRV1_9PROT/16-380LITDGCIAFDRIDKG------YKGRLFLEILSLSF---------------------------------------------
G8PHJ6_PSEUV/2-361VITDQGKAFDRVEAG------YNGPLYAEISPKTF---------------------------------------------
B2III7_BEII9/27-392LITDRSEVFDRAARA------YEGPLYAEVSPRSF---------------------------------------------
I7DZH0_PHAIB/12-367VITDQGVEFDRVPDG------YDGPLYAEICPQSF---------------------------------------------
D8PJ22_9BACT/7-382VVTDLNAGFDEIRAG------YRGPLYLEVVPRSF---------------------------------------------
G4R8T6_PELHB/6-364VISDAARSFDIVPAG------YKGALYLEISPRTF---------------------------------------------
M4Q6K7_LIBAS/2-364VIGDRSQEFDSISPN------YSGPLYLEILPRTF---------------------------------------------
Q92S94_RHIME/4-363VITDRAQEFDKIPAG------YSGPLYLEISPRTF---------------------------------------------
B8ELJ2_METSB/17-383LITDNSEVFDRVARA------YEGPLYAEVSPRSF---------------------------------------------
Q3SWD3_NITWN/9-367VIADGTRSFDMIGAG------YHGPLYAEISPKTF---------------------------------------------
D7A3W4_STAND/8-367VIADRSRAFDIVPLG------YEGKLYLEISPRTF---------------------------------------------
J7Q6T1_METSZ/2-364LITDRGDRFDEVAPG------YHGPLYAEVSPRSF---------------------------------------------
C5B418_METEA/18-375VLADRSTTFDSVAPG------YVGPLYAEICPGTF---------------------------------------------
Q6G4R3_BARHE/4-362VITDNAQEFDKICVG------YHGPLYLEISPRTF---------------------------------------------
C5AS03_METEA/8-364VITDRASAFDQIEAG------YAGQLYAEISPRTF---------------------------------------------
A7HQ50_PARL1/26-383LITDFCAEFDQVAAG------YKGHLYLEISPRTF---------------------------------------------

PF06284

UL84_HCMVM/1-586RIITPLLKRLPLRRKAAHHTALHDCLALHLPELTFEPTLDINNVTENAASVADTAESTDADLTPTLTVRVRHALCW-HRV

PF06501

VU55_HHV6U/3-432NWTESPYQSQKLDRYGRKLLIVFSVFSIDTRECPY----------------------------------------WENLF
V55B_HHV7J/5-430EWKLSTYQRSIERTPGHPLTTLCTVCSVNINNLPF----------------------------------------WFHDV
O56289_9BETA/6-427TWEKNEFQPLLKNSNDQRLETMYCIFTFNTTYCKY----------------------------------------WNVFF

PF05784

VU54_HHV6U/4-339RWIEQTPE.EPTRYS------FKAEIWVNLQNTPL---------------------------------------------
PP71_HCMVM/28-371NWRRRTDSSLEAGQI------FVSQFAFRAGAIPL---------------------------------------------
PP65_HCMVM/15-357AWTRQQNQWKEPDVY------YTSAFVFPTKDVAL---------------------------------------------

PF00692

DUT_HUMAN/121-250--HFIDVG..AGVI------------------------------------------------------------------
DUT_ICHVA/62-187--NFVSTG....II------------------------------------------------------------------
DUT_EBVB9/119-240--GILVKP......------------------------------------------------------------------
DUT_SHV21/120-244--GLTIKV......------------------------------------------------------------------
DUT_HAEIN/15-149--HGIVLGNLVGLI------------------------------------------------------------------
DUT_HHV11/206-337--GLLVVP......------------------------------------------------------------------
DUT_YEAST/16-146--NGIQTG..AGVV------------------------------------------------------------------
DUT_ECOLI/15-149--HGIVLGNLVGLI------------------------------------------------------------------
DUT_VZVD/225-354--GIIVCP......------------------------------------------------------------------
DUT_SOLLC/39-168--YSIDVG..AGVI------------------------------------------------------------------
F4B717_ACIHW/46-166--GLFVPP...TIV------------------------------------------------------------------
DUT_CANAL/28-157--HGISTG..AGVI------------------------------------------------------------------
DUT_VACCW/18-145--GIDIGG...GVI------------------------------------------------------------------
DUT_HHV6U/242-365--GLLIET...YIW------------------------------------------------------------------
Q6TVW3_ORFSA/26-154--HFIDVG..AGVI------------------------------------------------------------------
Q8V3S4_SWPV1/13-141--YNIDIG..GGVI------------------------------------------------------------------
PRO_MMTVC/620-741--GLEVLP...GVI------------------------------------------------------------------
Q9TTD4_SHEEP/13-133--GILIHP...GVI------------------------------------------------------------------

PF04797

LF2_EBVA8/37-401--PYLLAQHTPPFLK..............................................................---
VG10_EHV2/21-391--MAFKWEGARQFYRVT........................................................NSYF---
VG10_ALHV1/6-378--MLFKDQKIPCMVN...........................................................YSN---
LF1_EBVB9/5-442--LAFPYAGPPPVAWYRHSINLTRSEGVGIGKDCAQDHACPVPPQGHASSAADQAGVPERGRKRAHEGPGAGEAASA---
VG11_ALHV1/22-387--PFMLGQKTKPFLS..............................................................---
VG11_SHV21/24-388--PYLMAQKTKPFDK..............................................................---
VG11_EHV2/74-450--PFLLAQRTPRFER..............................................................---
ORF11_HHV8P/26-387--YFLVRKPKSRLAK..............................................................---
ORF10_HHV8P/7-387--GYFHSPVPLSFLDLL.......................................................TFESM---

PF06559

B0T2H0_CAUSK/6-336--SVLVRSGTRLNQ-----------------------------------------------------------LRLK...
A6WVX6_OCHA4/5-363--PIVVRTGSRLSQ-----------------------------------------------------------IRFR...
A7ICI7_XANP2/10-371--PILVRTGSRLSQ-----------------------------------------------------------VRFR...
D9QL85_BRESC/7-337--SILVRPGTRLNQ-----------------------------------------------------------LRLK...
E3I262_RHOVT/9-354--PILVRTGSRLSQ-----------------------------------------------------------IRFR...
S0EVQ5_CHTCT/8-380--AIRVRAGDALAQ-----------------------------------------------------------IRFQ...
U6B352_9RHIZ/4-360--PIIVRSGSRLSQ-----------------------------------------------------------IRFR...
E3F1H9_KETVY/2-356--SVLVRAGMRLNQ-----------------------------------------------------------IRFR...
Q0ASF2_MARMM/3-337--SILAREGDRLSQ-----------------------------------------------------------VRFR...
J9ZEW7_LEPFM/2-359--PLKVKPGLSLSQ-----------------------------------------------------------LRLF...
Q11M73_CHESB/3-361--PIVVRPGSRLSQ-----------------------------------------------------------IRFR...
Q1GI72_RUEST/2-356--SVLARPGMRLNQ-----------------------------------------------------------IRFR...
I0IM71_LEPFC/2-351--PLRISSGLCLSQ-----------------------------------------------------------LRLF...
F8J4V2_HYPSM/17-374--PIVVRKGSRLSQ-----------------------------------------------------------IRFR...
D5BMT1_PUNMI/8-370--SVLVRAGSRLSQ-----------------------------------------------------------LRLR...
A1B368_PARDP/7-360--SVLVRPGMRLNQ-----------------------------------------------------------LRLR...
E0TCQ3_PARBH/11-366--SIVVRPGSSLNQ-----------------------------------------------------------LRIR...
F2IY64_POLGS/9-367--PILVRTGSRLSQ-----------------------------------------------------------IRFR...
D5AUM0_RHOCB/3-361--SVLVRPGMRLNQ-----------------------------------------------------------IRFR...
Q28RG4_JANSC/9-360--SVKIAPGLRLNQ-----------------------------------------------------------IRFR...
W8S3S8_9RHOB/5-358--SVLVKPGLALNQ-----------------------------------------------------------IRFR...
V5SAL4_9RHIZ/10-372--PIVVRKGSKLSQ-----------------------------------------------------------LRFR...
M9RD28_9RHOB/2-357--SVLVRPGLMLNQ-----------------------------------------------------------IIFR...
C6XMA9_HIRBI/10-342--SILAREGDRLLQ-----------------------------------------------------------LRLR...
Q0BYT8_HYPNA/2-334--PIKVRPGDRLAQ-----------------------------------------------------------LRFK...
Q3J368_RHOS4/2-356--SVLVRPGMRLNQ-----------------------------------------------------------IRFR...
B8IN71_METNO/5-360--PVLVRTGSRLSQ-----------------------------------------------------------IRFR...
A8ILD7_AZOC5/12-371--PILVRTGSRLSQ-----------------------------------------------------------VRFR...
V9TRV1_9PROT/16-380--NVVVSYGSRLNQ-----------------------------------------------------------LRFQ...
G8PHJ6_PSEUV/2-361--PVLVREGSRLCQ-----------------------------------------------------------IRFR...
B2III7_BEII9/27-392--SIRVRRGTRLNQ-----------------------------------------------------------IRFRRLN
I7DZH0_PHAIB/12-367--SVVVQPGQLLTQ-----------------------------------------------------------IIFR...
D8PJ22_9BACT/7-382--AIKVRTGDSLNQ-----------------------------------------------------------IRFV...
G4R8T6_PELHB/6-364--PVLVRTGSRLSQ-----------------------------------------------------------MRFR...
M4Q6K7_LIBAS/2-364--PIVVRVGSRLSQ-----------------------------------------------------------IRFV...
Q92S94_RHIME/4-363--PIVVRRGSRLSQ-----------------------------------------------------------IRFR...
B8ELJ2_METSB/17-383--SVRVRKGSKLNQ-----------------------------------------------------------IRFRRLN
Q3SWD3_NITWN/9-367--PVLLREGSRLSQ-----------------------------------------------------------VRFR...
D7A3W4_STAND/8-367--PILVRQGSRLSQ-----------------------------------------------------------IRFR...
J7Q6T1_METSZ/2-364--SVRVRTGSRLNQ-----------------------------------------------------------LRFR..T
C5B418_METEA/18-375--PIVVRKGSRLSQ-----------------------------------------------------------IRFR...
Q6G4R3_BARHE/4-362--PILVRTGSRLFQ-----------------------------------------------------------LRFR...
C5AS03_METEA/8-364--PVRVRTGSRLSQ-----------------------------------------------------------IRFR...
A7HQ50_PARL1/26-383--PILVRPGSRLAQ-----------------------------------------------------------IRFR...

PF06284

UL84_HCMVM/1-586EGGISGPRGLTSRI------------------------------------------------------------------

PF06501

VU55_HHV6U/3-432K..SIIPLCRVNMI------------------------------------------------------------------
V55B_HHV7J/5-430RSGSDFPTCKVFSI------------------------------------------------------------------
O56289_9BETA/6-427A..SATPICNVEMI------------------------------------------------------------------

PF05784

VU54_HHV6U/4-339--DQIFKTGNIEFI------------------------------------------------------------------
PP71_HCMVM/28-371--TLV.DALEQLAC------------------------------------------------------------------
PP65_HCMVM/15-357--RHV.VCAHELVC------------------------------------------------------------------

PF00692

DUT_HUMAN/121-250--------------------------------------------------------------------------------
DUT_ICHVA/62-187--------------------------------------------------------------------------------
DUT_EBVB9/119-240--------------------------------------------------------------------------------
DUT_SHV21/120-244--------------------------------------------------------------------------------
DUT_HAEIN/15-149--------------------------------------------------------------------------------
DUT_HHV11/206-337--------------------------------------------------------------------------------
DUT_YEAST/16-146--------------------------------------------------------------------------------
DUT_ECOLI/15-149--------------------------------------------------------------------------------
DUT_VZVD/225-354--------------------------------------------------------------------------------
DUT_SOLLC/39-168--------------------------------------------------------------------------------
F4B717_ACIHW/46-166--------------------------------------------------------------------------------
DUT_CANAL/28-157--------------------------------------------------------------------------------
DUT_VACCW/18-145--------------------------------------------------------------------------------
DUT_HHV6U/242-365--------------------------------------------------------------------------------
Q6TVW3_ORFSA/26-154--------------------------------------------------------------------------------
Q8V3S4_SWPV1/13-141--------------------------------------------------------------------------------
PRO_MMTVC/620-741--------------------------------------------------------------------------------
Q9TTD4_SHEEP/13-133--------------------------------------------------------------------------------

PF04797

LF2_EBVA8/37-401-----..SYARIHTFPGKVCPVNAIRRGK----GYVRVSVDTPDLKREGP----LN....VKV-------------GMTL
VG10_EHV2/21-391-----CEQYNRFKIVRLCVKECKMYRKEG----NVHVLDITVVGDTQPEM----VHGVVSVMG-------------AEVD
VG10_ALHV1/6-378-----VFASYHSPNEEILPRALEITMLGQ----KTARLTFRPGHECPSAT----VSFRAEVRP-------------ILQP
LF1_EBVB9/5-442-----GRGDVALSQSRALLWRGLGWDTGR----GRLAPGLAMSRDAASGS----VHLDIQVDR-------------AEEG
VG11_ALHV1/22-387-----..KAVKVHALADEVCKVNDVCMGD----NYMKIHL.....DFHFA----LDKHLPVDI-------------CMSP
VG11_SHV21/24-388-----..KMARVHTVQNEVCEVNSIYRGE----NHVKVAIQ....KDSED----INFLDTVVV-------------GLTM
VG11_EHV2/74-450-----.GGFCKVHVTQGVTCPVNAVKLSN----DYVRLPVCELRGDGGAG----AAAPSQIKV-------------GVTL
ORF11_HHV8P/26-387-----..PFARLSAETTEECRVRSIRLGK----THLRISVT....APAQE----TPVWGLVTT-------------SFSL
ORF10_HHV8P/7-387-----GCENVEGDPEPLTPKYLTFTQTGE----RLYKVTVHNTHSTACKK----ARIRFVYRP-------------TPSA

PF06559

B0T2H0_CAUSK/6-336.....RGEPVKLATR..............----......................SV..GVDL.........TT..GIVG
A6WVX6_OCHA4/5-363.....KGRAQLDEAELAALHHAETLVAAE----.MPN.IS.......GGG....IAL..SVDL...SG...GPD..RLIG
A7ICI7_XANP2/10-371.....RGVSRLSDLELLSLQSAECLVDAP----.QPD.VA.......AGG....IAL..GVDL...AG..EVIP..GLQG
D9QL85_BRESC/7-337.....AGEPPKLETR..............----......................SV..GVDL........QGG..DIVG
E3I262_RHOVT/9-354...DANGGGAAASAE..............----..............AGGQPRDVAL..SVELGGEPG........ALIG
S0EVQ5_CHTCT/8-380.....TGEPRLSAEETRALLDEVPIILSS----..ELLPLRSRDLAISNG....ILL..SIYLPRYSG..QGRQ..ATIG
U6B352_9RHIZ/4-360.....QECNSSSEIDLKSYHDQDPLIVGG----DFNFS.........DEG....VSL..SLDLSDNTG.....D..GIIG
E3F1H9_KETVY/2-356.....RGGAALDDDALRALHRRIPLVDGT----....PVI.......SDG....LAF..SVDL....S..PARG..TLVG
Q0ASF2_MARMM/3-337.....QGAHKALRE...............----.....................VTV..SVDLAGFGD........GIVG
J9ZEW7_LEPFM/2-359.....ENRKILTDLELMNRHRTFPLFWYD----GKHKEETEEF....RDG....VSL..GVDL........SFE..SIVG
Q11M73_CHESB/3-361.....RGNALLTESDLADLHERETLVAAE----.SPN.IS.......GGG....IAL..SIDL...EG...GPD..GLVG
Q1GI72_RUEST/2-356.....DGQSVLDDAALADLHAKTPLVDGE----....AVI.......EDG....LGF..SVDL....R..LPGT..DLVG
I0IM71_LEPFC/2-351.....SSREILSDEDLLLLHKKYSLYSDE----AEGGL.........QDG....LVL..GVDL........SEG..DVVG
F8J4V2_HYPSM/17-374.....NGPAADSDEVLRELHAKERLVSAQ----.DAD..I.......AGG....IAL..TVDL...SG..HG.D..GLVG
D5BMT1_PUNMI/8-370.....RGEPHISDDMMQDLQRKVGLVHGT----DAPD..I.......RDG....IAL..SVNL...AP..DTQS..GMIG
A1B368_PARDP/7-360.....QGQAVLTDTELRDLHVREPLVTGE----....ALI.......DEG....LGF..SVDL....R..PQGG..DLVG
E0TCQ3_PARBH/11-366.....HGETRLSDEALGERARREDLTGPR----HHGH..I.......HQG....LCV..SVDL...SG...DLG..PVAA
F2IY64_POLGS/9-367.....IGNPLISDEDLQEIHAAQRLVDGG----.DER..I.......GGG....VQL..SIDL...KG..SGEG..SLVG
D5AUM0_RHOCB/3-361.....AGQAALSDPELKALHAAEPLVSGI----GHGGAVI.......DHG....LGF..SVDL....R..PAEG..DLVG
Q28RG4_JANSC/9-360.....RGQATLTDAALAERHAQTPLVDQT----....PLI.......DDG....LGF..SVDL....S..PQDT..TLVG
W8S3S8_9RHOB/5-358.....LGEAVLSDDELRARHADHPLVTGT----..EAAVI.......DDG....LGF..SVDL....R..PETG..SLVG
V5SAL4_9RHIZ/10-372.....SGDPRETDDALRRLQAEQTLVSGG----.DAD..I.......QDG....IAL..SVDL...KGFEKGGDGTGLVG
M9RD28_9RHOB/2-357.....NGKTFINDTDLIALHAKTPIVDGE----....AVI.......SDG....LGF..SVDL....K..PQSG..DLVG
C6XMA9_HIRBI/10-342.....NGEQKTIRDEI.............----.......................F..SIDL....K..PGND..DIAG
Q0BYT8_HYPNA/2-334.....KKKPETLREKV.............----.......................V..SIDL....E..PPAG..QPAG
Q3J368_RHOS4/2-356.....AGEATLSDAELADLHGREPLVDGT----....PVI.......SGG....LGF..SVDL....R..PVEG..DLVG
B8IN71_METNO/5-360.....RGAVRLDDAALARLHAETPLVSAA----.DPS..F.......QGG....VAV..SVDL...SG..FD....GLIG
A8ILD7_AZOC5/12-371.....RGVARLSDLELLNLQQEQRLVDSD----.APD.VA.......GGG....IAL..GVDL...AG..AAWN..GILG
V9TRV1_9PROT/16-380.....RGVSKISSKEVRKRHALGHFAKVD----AGDILIS.......PRG....TLLPCSIDL...QG..AGKG..TIVG
G8PHJ6_PSEUV/2-361.....NGGGFIPDEHLLHIHKEHTLVSGG----.NDEHAI.......SNG....VQV..SIDL...KG..NGKD..SLIG
B2III7_BEII9/27-392SQQLERNDFSLDEKELRERHEALPLVDGP----....LNL.......RNG....LVL..RVAL...SR..EPLG..PIIG
I7DZH0_PHAIB/12-367.....QGRTFLSDADLRAVHEATPIVSGD----....PVI.......SDG....LGF..SVDL....R..PERG..DLVG
D8PJ22_9BACT/7-382.....RGDATVSDSALQKLHGTDPLLFHN----ASPPKALPQKEFRTDRG....LFL..RIDL...TG.SARED..AVIG
G4R8T6_PELHB/6-364.....VGDARLDAAGHKALHAEQTLVF..----.DPNMDV.......GEG....VSL..SIDL...VG..EGRN..GLIG
M4Q6K7_LIBAS/2-364.....KERKFCSQEELSALHELSPLVQDG----LRDFS.........GKG....VAL..SVDL...KGNEIGKK..SIIG
Q92S94_RHIME/4-363.....IGHSVLSEQELLALHESDVLVASD----.RPN.VS.......GGG....IAL..SIDL...KG..TGPD..GLIG
B8ELJ2_METSB/17-383SQQLERTGFAVDDRDLRERHKAASLVDGE----....LNL.......RQG....LVV..RVAL...SAAIQPDG..A.IG
Q3SWD3_NITWN/9-367.....SGDAVLDADELDALHASERLVDSD----.DTD..F.......VNG....VAL..SVDL...SG..AQAH..GFVG
D7A3W4_STAND/8-367.....RGDARLEENELRALDAAEKLVDTP----.RPD.VA.......GAG....IAV..SVDL...SG..EGFG..GLLG
J7Q6T1_METSZ/2-364YAQSESQGGTLGDAALDELHRASPLVDGP----....LNL.......RDG....VVL..RVAL...DA..DAFG..GIIG
C5B418_METEA/18-375.....QGDSRLTDAETAALHAVDPLTDAA----...VPCF.......EGG....VAF..SVDL...EG..FGPD..RIVG
Q6G4R3_BARHE/4-362.....KGHSYLNEIELHALHRDETLISDD----.LPN.IS.......AGG....IGL..SINL...KG...DEN..GLVG
C5AS03_METEA/8-364.....QGDPRLRETELAALHASDPLIDAA----.TPS..L.......QGG....VPV..SVDL...AG..FD....GLIG
A7HQ50_PARL1/26-383.....RGTHTSSDAEMKRLHEELRLVDGE----.AD...I.......DGG....IAL..TVNL...AA..ETED..EVVG

PF06284

UL84_HCMVM/1-586-----SARLSETTAKTLGPSVFGRLELDPNESPPDLTLSSLTLYQDGILR--FNVTCDRTEAP-------------ADPV

PF06501

VU55_HHV6U/3-432-----SEP---------GISIY-KIEFND---------PFLTVF----LRNVVLPENKRRFPI-------------TKEC
V55B_HHV7J/5-430-----SDP---------TVSVL-KMIFSP---------PLLEIY----LRCYTEVTKNNTYMV-------------PNDC
O56289_9BETA/6-427-----SEH---------NVSVY-KIEYRS---------PVLFVF----LR..YLKVMNSRFCV-------------D.EC

PF05784

VU54_HHV6U/4-339-----SHK---------NVYIS-RILLCG----NLLILK.....----ANYENDYLLDDNFYP-------------E-QL
PP71_HCMVM/28-371-----SDP---------NTYIH-KTETDE----RG...QWIMLF----L.....H.HDSPHPP-------------T-SV
PP65_HCMVM/15-357-----SME---------NTRAT-KMQVIG----DQ....YVKVY----L.....ESFCEDVPS-------------G-KL

PF00692

DUT_HUMAN/121-250--------------------------------------------------------------------------------
DUT_ICHVA/62-187--------------------------------------------------------------------------------
DUT_EBVB9/119-240--------------------------------------------------------------------------------
DUT_SHV21/120-244--------------------------------------------------------------------------------
DUT_HAEIN/15-149--------------------------------------------------------------------------------
DUT_HHV11/206-337--------------------------------------------------------------------------------
DUT_YEAST/16-146--------------------------------------------------------------------------------
DUT_ECOLI/15-149--------------------------------------------------------------------------------
DUT_VZVD/225-354--------------------------------------------------------------------------------
DUT_SOLLC/39-168--------------------------------------------------------------------------------
F4B717_ACIHW/46-166--------------------------------------------------------------------------------
DUT_CANAL/28-157--------------------------------------------------------------------------------
DUT_VACCW/18-145--------------------------------------------------------------------------------
DUT_HHV6U/242-365--------------------------------------------------------------------------------
Q6TVW3_ORFSA/26-154--------------------------------------------------------------------------------
Q8V3S4_SWPV1/13-141--------------------------------------------------------------------------------
PRO_MMTVC/620-741--------------------------------------------------------------------------------
Q9TTD4_SHEEP/13-133--------------------------------------------------------------------------------

PF04797

LF2_EBVA8/37-401LDDVII..........AFRYNPYPKSHWRWDGES.TDIRYFGSPVIIPPNFITELEYNNTYEAPLSSKITA..VVVSHSS
VG10_EHV2/21-391...SML..........VTDRYISPLYNQAWGW...ALPLYAPTQVVVPPKKTLKVPVDGMFFRGTVPGAQPVCLIGGSNI
VG10_ALHV1/6-378KV..............LFSHFLNWIRVNYDCQ...VMPLYPEQEEVVNAHDWVRFQVNNKFLVSTAVDTPLKVFICGLGQ
LF1_EBVB9/5-442WVCDVLLEPGPPTAREGCSLSMDPGLVTLKDAWT.LFPLHPEHDAVVPPKEEIHVMAQGHLQGGTPSLWGF...TFQEAA
VG11_ALHV1/22-387TNNTVL..........SFKFNPFVKTPWEPTPAK.VPIVYMGEPVLIPGSCSTIVEYCNRYYVAKGLRITA.IIVSVETD
VG11_SHV21/24-388TNRALV..........AFEYNPYFSCPWDWKRQS.IPIIYDGPCIRIPAGRLAPVKYNNTYSSIYPNATAI...ITNSDS
VG11_EHV2/74-450VREAML..........AFRYNPYLFSPWCWAEAT.VPIHYYGPPVIVPAGQAARVVYGNVYYAPMLDELTA.VIAPPLDG
ORF11_HHV8P/26-387TPTAPL..........AFDRNPYNHETFACNARHYIPVIYSGPKITLAPRGRQVVWHNNSYTSSLPCKVTA..IVSNHCC
ORF10_HHV8P/7-387...RQL..........VMGQASPLITTPLGAR...VFAVYPDCEKTIPPQETTTLRIQLLFEQHGANAGECAFVIMGLAR

PF06559

B0T2H0_CAUSK/6-336FRGRRHAGVIDLDHEDGHDPRDFWEPLETRHGE...LLLDPGEFYILASKDNIEIPVL-----EAAEMTPIDPSVGEFRV
A6WVX6_OCHA4/5-363YRGKHHTAVVDVDKRAAHDVLDFWEPIYDR.GARE.LVLDPDEFYILVSREAVHVPPL-----YAAEMTPFDPLVGEFRV
A7ICI7_XANP2/10-371FRAKKHTGVIDVDEAGVLDVEDFWEPIRLRPGRTAGLVLDPDAFYILASREAVHVPPD-----YAAEMVPFDPLVGEFRV
D9QL85_BRESC/7-337FRGRRHAGVVDLDKIDGHDPKDFWEPLSLRRGE...LLLDPGEFYILASNEAVEIPVM-----QAAEMTPIDPSVGEFRV
E3I262_RHOVT/9-354YRAKRHTGVIDVDRAGAYDIEEFWEPIAATHHHR..LILDPDEFYILASKEAVRVPAT-----HAAEMEPFNALMGEFRV
S0EVQ5_CHTCT/8-380YQARKNTPPIDLRAIGQARKRHYWDRLYADGKP...IILEPDEFYIFRSRELVCLPPT-----ICAEMVAFDAGSGELRT
U6B352_9RHIZ/4-360YKAKRHTASIDIDAKGKYDIADFWEVIHYHGLEK..ILIDPNEFYILSSRETVRIPPS-----FAAEMIPYDPRIGEFRS
E3F1H9_KETVY/2-356YRAKPHTGVIDLDLIGHYDPADYWEEIHSKQGQ...IILDPGAFYILVSRESVCIPPD-----YAAEMSPYLAMVGEFRV
Q0ASF2_MARMM/3-337YRARRHSGLVDLSRIGGHAAGRYWEPLTAPDRR...LVLDPGEFYILASREAVTIGCD-----EAAEMAPIATEIGEFRA
J9ZEW7_LEPFM/2-359YKARPNTRVLDLTVSSENPAEPFWEPIMRPSSGD..LILEPESFYLFASRAKIRIPSD-----MAGEMVEFDAQSGELRT
Q11M73_CHESB/3-361YRAKHHTSLIDVDRKAAHEIHDFWEPLYNY.GSKD.LILDPDEFYILVSREAVHVPPG-----YAAEMTPFDPLVGEFRV
Q1GI72_RUEST/2-356YRAKPHTGVIDLDRISAYDPRDYWEEVRSDKGR...IILDPGAFYILVSREAVHIPPE-----YAAEMAPYLAMVGEFRV
I0IM71_LEPFC/2-351YRARKNSGILDLSSLTPLSPEAFWEPIKTPSGGA..LILEPEEFYLFASRSRLKIPKN-----FAAEMLEFDAQSGELRT
F8J4V2_HYPSM/17-374FRARRHTGVVDVDRVGAYPIEDYWDPIHVK.DKHR.LILDPDQFYILASKEAVHVPPT-----HAAEMVPFNPLVGEFRV
D5BMT1_PUNMI/8-370WRARKHAGLIDIDAPASVSVNEFWEQLTPDDLTAGGLVLNPDEFYILASREFVTVPKD-----HAAEMRAYDTRVGEFRA
A1B368_PARDP/7-360YRARPHSGVIDLDRIGAYRARDFWDELRTTDGQ...LILDPGAFYILVSREAVAIPPD-----YAAEMAPYLAMVGEFRV
E0TCQ3_PARBH/11-366WRAKKHTGLIDVDRVAALRPEAYFDPLPVMQDQF..LILDPGEFYILASQEELRLPDD-----LAAEMAPIDADLGAFRV
F2IY64_POLGS/9-367YRAKHHTAVIDVDLRAVHHPLDFWEPIHRR.DEAS.LILDPNEFYILVSREAVHVPPD-----FAAEMVPFDPLVGEFRV
D5AUM0_RHOCB/3-361YRAKPHAGVVDLDRIAHYPASDFWEEVRTREGR...IILDPGAFYILVSREAVVIPPD-----FAAEMAPYLAMVGEFRV
Q28RG4_JANSC/9-360YRAKPHAGVIDLTQIGAHKTAEFWEDIHSDTGQ...IILDPGAFYILVSREAVTIPPD-----CAAEMAPYLAMVGEFRV
W8S3S8_9RHOB/5-358YRAKPHAGVIDLTRIAAHDIAEFWEEVRSETGR...IILDPGAFYILVSQEAVTIPPD-----CAAEMAPYLAMVGEFRV
V5SAL4_9RHIZ/10-372YRAKRHTGVVDVDQPGACAIADYWEPVFAD.SKRR.LILDPDQFYILASKEAVHIPPT-----HAAEMMPFNPLVGEFRV
M9RD28_9RHOB/2-357YRAKPHTGVIDLAQVAHYEPADFWEEVRTTDGH...IILDPGAFYILVSRESIAIPPD-----CAAEMAPYIAMVGEFRV
C6XMA9_HIRBI/10-342YRAKRHSRVLDLKNINGHKIEDFWEPVRPYNGA...LVLDPGEFYILASKEKVVIPVD-----EAAEMAPIAPEFGEFRA
Q0BYT8_HYPNA/2-334YRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGR...IVLNPEEFYILVSRETVKVAAN-----EAAEMAAIAPELGEFRA
Q3J368_RHOS4/2-356YRAKPHTGLIDLDRIGHYPASDFWEEVRARDGR...IILDPGAFYILVSREAVTIPPD-----HAAEMAPYLAMVGEFRV
B8IN71_METNO/5-360YRAKRHTGLVDVDRPRSYAVSEFWEPLRAD.GSGT.LILDPGQFYILASKECVQVPPD-----FAAEMVPFDPLVGEFRV
A8ILD7_AZOC5/12-371FRAKKHTGVVDVDKRAALDVEDFWEPIRAR.GHSS.LVLDPDAFYILASREAVQVPPE-----HAAEMVPFDPLVGEFRV
V9TRV1_9PROT/16-380YKARKNTCVIDVDRKYTYPASKFWEQLYWDHGQ...LILEKDEFYILGTREELAVPPD-----LAAEMLPFNNQFGEFRV
G8PHJ6_PSEUV/2-361YRAKRHTGVIDVDRKDAQDPADFWEPIYNR.GDAT.LILDPNEFYILVSQEAVHVPPN-----YAAEMVPFDPLVGEFRV
B2III7_BEII9/27-392YRAQKHADILDVDRVGAYAVSDYWEPILAREDQR..LILDPGEFYILASHEKLHIPPD-----LAAEMVPIDPAMGEFRV
I7DZH0_PHAIB/12-367YRAKHHTGVVDLSKLGHYDPAEYWEEVRTTKGQ...IILDPGAFYILVSREAIAIPPD-----YAAEMAPYLAMVGEFRV
D8PJ22_9BACT/7-382YRAKKNSHVIDLAKIGHYAALDFWEPLKRHRQDS..LLLEPEEFYILASKERIRVPPG-----YAAEMVAYEAACGELRT
G4R8T6_PELHB/6-364FRSKRHTAVVDVDKKNALDVLDYWDPLVNR.GSGE.LILDPDEFYILVSRESVHVPPD-----YAAEMVPFDPLVGEFRV
M4Q6K7_LIBAS/2-364YRAKRHTAAIDVDSENKYDESDFWDPLFSWDAPEGQFILDPNEFYIFASREFIQIPPS-----LVAEMIPYDHSIGEFRV
Q92S94_RHIME/4-363YRGKHHTSVVDVDKKAQHAVFDFWEPLYSR.GRDD.LVLDPDEFYILVSREAVHVPPR-----YAAEMTPFDPLVGEFRV
B8ELJ2_METSB/17-383YRAQKHADIIDVDRAGGYRLDDYWDRIFARPDGR..LILDPGEFYILASQERLHIPSD-----LAAEMVPIDPAMGEFRV
Q3SWD3_NITWN/9-367YRAKRHTGVIDIDRRGGYAVGEFWEPIAAR.PDAS.LILDPGEFYILASKEAVQVPPD-----YAAEMVPFDPLVGEFRV
D7A3W4_STAND/8-367FRAKRHTGLIDVDKRAACEVEDYWEPLYTR.GRRE.LVLDPDAFYILASKEAVHVPPS-----HAAEMVPFDPLVGEFRV
J7Q6T1_METSZ/2-364YRAQKHTDVIDVDRIGAYRIDDYWDRLPSR.DGR..LILDPGDFYILASHERLAIPPD-----LAAEMAPMDAAIGEFRV
C5B418_METEA/18-375YRARQHAGIVDVDKVGAHRWKEFWTPIHAAEGAE..IVLDPGAFYIMASKEAVSVPPE-----YSAEMVPFDPLLGELRC
Q6G4R3_BARHE/4-362YRGKRHTSVIDIDKHAVANILDFWEPLFDR.GQRE.LILDPDEFYILVSRESVHVPPL-----YAAEMTPFDPLVGEFRV
C5AS03_METEA/8-364YRAKRHTGLIDVDRPRGHRTRDFWEPLPAD.GSRT.LILDPGQFYILASKEAVRVPAD-----YAAEMVPFDPLVGEFRV
A7HQ50_PARL1/26-383YRAKRHSGVIDIDKIGVYDVRDFWDPVHVRPGKG..LILDPDEFYILASREALHIPAT-----HAAEMVAYNPLVGEFRV

PF06284

UL84_HCMVM/1-586AFRLRLRRETVRRPFFSDAPLPYFVPPRSGAADEGLEVRVPYELTLK-NSHTLRIYRR--FYGP--YLGVFVPHNRQGLK

PF06501

VU55_HHV6U/3-432YLRLTF.SPPDRSTVTLNMNMPYF---KICADGKNLEVFFPNDMSLV-SNTNKEITLRGEFTNKK-IVGIFIPVQTHVFK
V55B_HHV7J/5-430MLKLGFVNEIIPNEISLTVHMHYF---KICSDKRKIDVFFQDTMLFD-EGETKKLHFKGTFYNFN-ANALYVPDPNSKVQ
O56289_9BETA/6-427SLRLRF.SKPNMQSVALNICMPYF---NISEEFKTMEIYFPERMTLT-PNHITQINLRGTFENPA-AVGLFIPKKSNVLS

PF05784

VU54_HHV6U/4-339AIQISL.TPQTADITLSQNQETLL---K.CNT-HSITVCATKNIIPN.TVTPVHCSFNTIFNSNSNFTGLFIPKLLLGIS
PP71_HCMVM/28-371FLHFSV.YTHRAEVVARHNPYPHL---RRLPD-NGFQLLIPKSFTLTRIHPEYIVQIQNAFETNQTHDTIFFPENIPGVS
PP65_HCMVM/15-357FMHVTLGSDVEEDLTMTRNPQPFM---RPHER-NGFTVLCPKNMIIK.PGKISHIMLDVAFTSHE.HFGLLCPKSIPGLS

PF00692

DUT_HUMAN/121-250-----------DED---YRG.NVGVVLFNFGKE.KFEVKKGDRIAQLICE------------------------------
DUT_ICHVA/62-187-----------DSD---FRG...HIHIMVSAIA.DFSVKKNQRIAQLVVT------------------------------
DUT_EBVB9/119-240-----------CRW---RRG.GVDVSLTNFSDQ.TVFLNKYRRFCQLVY.------------------------------
DUT_SHV21/120-244-----------.SR---WQN.QLQIIFYNYTKS.QITYTARTRIAQVVFM------------------------------
DUT_HAEIN/15-149-----------DSD---YQG.PLMVSMWNRGNE.PFKIEVGDRIAQLVFV------------------------------
DUT_HHV11/206-337-----------TRW---LPGHVCAFVVYNLTGV.PVTLEAGAKVAQLLVA------------------------------
DUT_YEAST/16-146-----------DRD---YTG.EVKVVLFNHSQR.DFAIKKGDRVAQLILE------------------------------
DUT_ECOLI/15-149-----------DSD---YQG.QLMISVWNRGQD.SFTIQPGERIAQMIFV------------------------------
DUT_VZVD/225-354-----------TAW---PAGEHCKFYVYNLTGD.DIRIKTGDRLAQVLLI------------------------------
DUT_SOLLC/39-168-----------DAD---YRG.PVGVVLFNHSEV.DFEVKVGDRIAQLIVQ------------------------------
F4B717_ACIHW/46-166-----------DAG---FEG...QLTIEVLGSAFPVKIKRGTRFLHLIFA------------------------------
DUT_CANAL/28-157-----------DAD---YRG.EVKVVLFNHSEK.DFEIKEGDRIAQLVLE------------------------------
DUT_VACCW/18-145-----------DED---YRG.NIGVILINNGKC.TFNVNTGDRIAQLIYQ------------------------------
DUT_HHV6U/242-365-----------NKD---TIP...SIKIFNSTRK.TIYIPTGICIARIIFT------------------------------
Q6TVW3_ORFSA/26-154-----------DED---YRG.NVGVVLFNFGNS.DFEVKKGDRIAQLICE------------------------------
Q8V3S4_SWPV1/13-141-----------DSD---YRG.EIGIVFINNGCS.DFNIKVGDRIAQIIFE------------------------------
PRO_MMTVC/620-741-----------DSD---FQG.EIKVMVKAAKN..AVIIHKGERIAQLLLL------------------------------
Q9TTD4_SHEEP/13-133-----------DSD---YTG.EIKILASAPNK..IIVINAGQRIAQLLLV------------------------------

PF04797

LF2_EBVA8/37-401NPVFYVYP...QEW---KPGQTLKLTVRNISNN-PITIVTGQSMAQAFFI------------------------------
VG10_EHV2/21-391NPDLVVRP...VVW---KPMTSLVLTLYNNSER-PLAIRRGDLAALAVPV------------------------------
VG10_ALHV1/6-378PSFLVADP...GIW---NPSSTCLLTLHNISNQ-PVKLRTCEPVAVGLLL------------------------------
LF1_EBVB9/5-442CDQWVLRP...RVW---TAHSPIKMTVYNCGHK-PLHIGPSTRLGLALFW------------------------------
VG11_ALHV1/22-387DTEFETDV...CEW---ASECTAKIMVSNKSLF-PRTLAPGTHIANAHFL------------------------------
VG11_SHV21/24-388CADFHISD...CEW---KPGKTACIVVTNTSTI-SVTISSGTHLGEAVFI------------------------------
VG11_EHV2/74-450DGDRRFGLMGCCEW---PKGGHAELAVENRTCF-LQVLRTGDRLGYAIFF------------------------------
ORF11_HHV8P/26-387NCDIFLED...SEW---RPNKPAPLKLVNTSDH-PVILEPDTHIGNALFI------------------------------
ORF10_HHV8P/7-387ETKFVSFP...AVL---LPGKHEHLTVFNPQTH-PLTIQRDTIVGVAMAC------------------------------

PF06559

B0T2H0_CAUSK/6-336HYAGFFDPGFGTEE...AGAVGSKGVLEVRSHETPFLLEDGQIVARLVYE------------------------------
A6WVX6_OCHA4/5-363HYAGFFDPGFGHSA...AGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYE------------------------------
A7ICI7_XANP2/10-371HYAGFFDPGFGNPA...AGGRGARAVLEVRSREVPFILEHGQTVGRLVYE------------------------------
D9QL85_BRESC/7-337HYAGFFDPGFGTDE...AHGAGSKGVLEVRTHDTPFLLEHGQIVARLVYE------------------------------
E3I262_RHOVT/9-354HYAGFFDPGFGMAE...AGGHGSRAVLEVRSHKVPFILEDGQLIGRLSYE------------------------------
S0EVQ5_CHTCT/8-380HYAGFFDSGFGYAAALPATETAAAVVLEVRSRDVPFLIEDGQPLFRIHLL------------------------------
U6B352_9RHIZ/4-360HYAGFFDSGFGHS....PECFVTKAVLEVRSLLLPFILEDGQVIARLKYE------------------------------
E3F1H9_KETVY/2-356HYAGFFDPGFGYAA...AGGAGSRGVLEVRCHESPFVLEHGQIVGRLVYE------------------------------
Q0ASF2_MARMM/3-337HYAGFFDPGFGTTE...AGGTGARAVLEVRGRDVPFLLEHGQPIARLVYE------------------------------
J9ZEW7_LEPFM/2-359HYAGFFDPGFGLVE...E...GARAVLEIRPHDVPFRVVDGQKIFRLRFE------------------------------
Q11M73_CHESB/3-361HYAGFFDPGFGHSA...SGGTGSRAVLEVRSHEVPFILEHGQIVGRLVYE------------------------------
Q1GI72_RUEST/2-356HYAGFFDPGFGHAA...AGGAGSRGVLEVRCHEAPFVLEHGQVVGRLVYE------------------------------
I0IM71_LEPFC/2-351HYAGFFDPGFGFSE...E...GAKAVLEVRPHDVPFRIVDGQRIFRLRYE------------------------------
F8J4V2_HYPSM/17-374HYAGFMDPGFGHAA...AGGNGSRVVLEVRSHKVPFILEDGQIIGRLIYE------------------------------
D5BMT1_PUNMI/8-370HYAGFFDPGFGVAE...IGATPTRAVLEVRSHDVPFLIEQDQTVCRLVYE------------------------------
A1B368_PARDP/7-360HYAGFFDPGFGHGS...A.GQGARGVLEVRCHEAPFALEHGQVVGRLVYE------------------------------
E0TCQ3_PARBH/11-366HYAGFFDPGFGLEA...P....SRAVLEVRGYDAPFLIRHGQTMARLTFE------------------------------
F2IY64_POLGS/9-367HYAGFFDPGFGHGQ...AGGTGSRAVLEVRSHDVPFLVEHGQTVGRLVYE------------------------------
D5AUM0_RHOCB/3-361HYAGFFDPGFGHGA...AGGEGSRGVLEVRCHEAPFVLEHGQVVGRLVYE------------------------------
Q28RG4_JANSC/9-360HYAGFFDPGFGH.......GVPARGVLEVRCHEAPFVLEHGQTVGRLVYE------------------------------
W8S3S8_9RHOB/5-358HYAGFFDPGFGH.......GIPARGVLEVRCHEAPFVLEHGQVVGRLVYE------------------------------
V5SAL4_9RHIZ/10-372HYAGFMDPGFGHSA...AGGSGSRVVLEVRSHKVPFILEDGQIVGRLVYE------------------------------
M9RD28_9RHOB/2-357HYAGFFDPGFGWDS...AGGAGSRGVLEVRCHEAPFVLEHGQIVGRLVYE------------------------------
C6XMA9_HIRBI/10-342HYAGFFDPGFG......VEGLEGKAVLEVRSREVPFILTDGQPMGRLVFE------------------------------
Q0BYT8_HYPNA/2-334HYAGFFDPGFGTNK...A...GSRAVLEVRSRDVPFILEHGQPVAKLIYE------------------------------
Q3J368_RHOS4/2-356HYAGFFDPGFGHAQ...AGGTGSRGVLEVRCHEAPFALEHGQVVGRLVYE------------------------------
B8IN71_METNO/5-360HYAGFFDPGFGHAA...AGGTGARAVLEVRSRDVPFMLEDGQIVGRLVYE------------------------------
A8ILD7_AZOC5/12-371HYAGFFDPGFGHPA...AGGSGARAVLEVRSREVPFILEHGQTVGRLVYE------------------------------
V9TRV1_9PROT/16-380HYAGFFDPGFGWAN...GQAQGSRAVLEVRSYGAPFALEHGQIVSCLDYR------------------------------
G8PHJ6_PSEUV/2-361HYAGFFDPGFGHST...VGGTGSRAVLEVRSHDVPFIVEHGQTVGRLVYE------------------------------
B2III7_BEII9/27-392HYAGFFDPGFGHTV...SNLPGARAVLEVRSREVPFILENGQVVGRLVYE------------------------------
I7DZH0_PHAIB/12-367HYAGFFDPGFGYAA...AGGAGSRGVLEVRCHDAPFVLEHGQVVGRLVYE------------------------------
D8PJ22_9BACT/7-382HYAGFFDPGFGYGD...GKMRGTQVVLEVRPHDVPFLIHDGQTFFKVVYD------------------------------
G4R8T6_PELHB/6-364HYAGFFDPGFGHSA...AGGTGSRAVLEVRSREVPFLLGHGQTIGRLIYE------------------------------
M4Q6K7_LIBAS/2-364HYAGFFDPGFGCVL...PQEVGAKAVLEVRS.SVPFVLEHGQIIGRLKYE------------------------------
Q92S94_RHIME/4-363HYAGFFDPGFGHAS...AGGSGSRAVLEVRSHEVPFILEHGQIVGRLVYE------------------------------
B8ELJ2_METSB/17-383HYAGFFDPGFGASP...DNRPGARAVLEVRSHEVPFVLEDGQIIGRLVYE------------------------------
Q3SWD3_NITWN/9-367HYAGFFDPGFGYAG...AGGEGSRAVLEVRSREVPFILEHGQIVGRLVYE------------------------------
D7A3W4_STAND/8-367HYAGFFDPGFGHSA...AGGSGARAVLEVRSREVPFILEDGQIVGRLVYE------------------------------
J7Q6T1_METSZ/2-364HYAGFFDPGFGAGP...DGRPGARAVLEVRSREVPFILEDGQFIGRLVYE------------------------------
C5B418_METEA/18-375HYAGLFDAGFGHAT...ANGEGSRGVLEVRCRDVPFVISHGQVLGRLVYE------------------------------
Q6G4R3_BARHE/4-362HYAGFFDPGFGHME...AGGKGARAVLEVRSHEVPFILEHGQIIGRLVYE------------------------------
C5AS03_METEA/8-364HYAGFFDPGFGLSE...AGGAGARAVLEVRSRDVPFLLEDGQIVGRLVYE------------------------------
A7HQ50_PARL1/26-383HYAGFFDPGFGARE...AGGAGSRIVLEVRSHEVPFILEHGQIIGRFVLE------------------------------

PF06284

UL84_HCMVM/1-586MPV--------TVW---LPRSWLELTVLVSDEN-GATFPRDALLGRLYFISSKHTLNRGCLSAMTHQVKSTLHSRSTSHS

PF06501

VU55_HHV6U/3-432LYP--------FLW---FAQE--PLKLRISCER-TVSVTEHDMLGRVFFV-TKKLFRKPFRSLSNSDMKSLLT--HTENT
V55B_HHV7J/5-430SIA--------SFW---SPTT--SFTTKVTSDR-SQRVTTNDIIGSIYFI-PTHILRTKFDPNYTDSFAAEIE--LNSED
O56289_9BETA/6-427.FP--------FIW---QPRE--TFRIYVYCRN-ETFVTEHDIIGHVYFI-SREQFPHSFHPTAHADCKSKVE--AAFNS

PF05784

VU54_HHV6U/4-339TTT--------GIW---DETRPLYITMKAFKK.-NRRINYSQPIGVVYFF------------------------------
PP71_HCMVM/28-371IEA--------GPL---PDRVRITLRVTLTGDQ-AVHLEHRQPLGRIHFF------------------------------
PP65_HCMVM/15-357ISG--------NLL---MNGQQIFLEVQAIRE.-TVELRQYDPVAALFFF------------------------------

PF00692

DUT_HUMAN/121-250--------------RIFY...PEIEEVQAL.DDTERGS-GGFGSTG------------
DUT_ICHVA/62-187--------------PCLT..QSEVVPYETL.ERTRRGT-GGFGSSG------------
DUT_EBVB9/119-240--------------..LHK.HHLTSFYS...PHSDAGV-LGP.RSL------------
DUT_SHV21/120-244--------------HKKH.....LPTTLTRLKPTMHLS-ENIKYSW------------
DUT_HAEIN/15-149--------------PVVQ...AEFNIVEDF.QQTERGE-GGFGHSG------------
DUT_HHV11/206-337--------------GADALPWIPPDNFHGT.KALRNYP-RGVPDST------------
DUT_YEAST/16-146--------------KIVD..DAQIVVVDSL.EESARGA-GGFGSTG------------
DUT_ECOLI/15-149--------------PVVQ...AEFNLVEDF.DATDRGE-GGFGHSG------------
DUT_VZVD/225-354--------------DHNT....QIHLKHNVLSNIAFPY-AIRGKCG------------
DUT_SOLLC/39-168--------------KIVT...PEVEQVDDL.DSTVRGS-GGFGSTG------------
F4B717_ACIHW/46-166--------------RTLT.......PVENPYHGKYQGQ-QGVT...------------
DUT_CANAL/28-157--------------QIVNA.DIKEISLEEL.DNTERGE-GGFGSTG------------
DUT_VACCW/18-145--------------RIYY...PELEEVQSL.DSTNRGD-QGFGSTG------------
DUT_HHV6U/242-365--------------.CGHF.CLSLMPERAI.NRLQVLD-ANSS...------------
Q6TVW3_ORFSA/26-154--------------RISH...PAVQEVNRL.DDTDRGD-SGFGSTG------------
Q8V3S4_SWPV1/13-141--------------RVEY...PIMEEVKCL.EDTERGN-SGFGSSG------------
PRO_MMTVC/620-741--------------PYLK.......LPNPI.IKEERGS-EGFGST.------------
Q9TTD4_SHEEP/13-133--------------PLVI.......QGKT..INRDRQD-KGFGSS.------------

PF04797

LF2_EBVA8/37-401--------------Y..AGDPSISTIMRRY-IQRQGCA-LTLPGNI------------
VG10_EHV2/21-391--------------.......NSTDIRTVY-SDNSGTL-ITWDTGT------------
VG10_ALHV1/6-378--------------YC...NDAHLPSRDVC-FCSETGR-LEWRNCV------------
LF1_EBVB9/5-442--------------..PAERSDNLDAGRIF-YQLTSGE-LYWGRTV------------
VG11_ALHV1/22-387--------------L.AERHFFSRILSDKN-LKKLSTC-IKLPGGF------------
VG11_SHV21/24-388--------------L.APKFFCRKIMSKTH-VQKLSSA-ICLPGNV------------
VG11_EHV2/74-450--------------I.APRIPMVNLLPARY-RENLSVA-VTVVGGV------------
ORF11_HHV8P/26-387--------------I.....APKARGLRRL-TRLTTKT-IELPGGV------------
ORF10_HHV8P/7-387--------------Y.IHPGKAASQAPYSF-YDCKEES-WHVG...------------

PF06559

B0T2H0_CAUSK/6-336--------------PLTA.RPDRLYGEG.G.SHYQRQG.LKLSKHFK-----------
A6WVX6_OCHA4/5-363--------------HMLH.RPSALYGVDLG.SNYQAQQ.LKLSKHFR-----------
A7ICI7_XANP2/10-371--------------RMAG.RPGTLYGADMR.SHYQGQG.LKLSKHFK-----------
D9QL85_BRESC/7-337--------------PLTE.RPTRLYGEG.G.SHYQRQG.LKLSKHFR-----------
E3I262_RHOVT/9-354--------------PLSE.PPARLYGHDIG.SHYQAQS.LKLSKHFR-----------
S0EVQ5_CHTCT/8-380--------------RCTE.EPEFLYGAQAG.SSYQSQRDVRLSKQFT-----------
U6B352_9RHIZ/4-360--------------SMME.KPDRLYGDNLG.SNYQYQR.LKLSKHFR-----------
E3F1H9_KETVY/2-356--------------RMDA.APQQLYGAGIA.SNYQGQG.LKLSKHFR-----------
Q0ASF2_MARMM/3-337--------------PMLD.VPHTVYGQ.VA.SNYQAQG.LKLSKFFA-----------
J9ZEW7_LEPFM/2-359--------------WMES.PPRHPYGLEIG.SNYSRQA.LKLSKYF.-----------
Q11M73_CHESB/3-361--------------RMGD.LPRALYGADLK.SNYQGQA.LKLSKHFR-----------
Q1GI72_RUEST/2-356--------------RMAE.LPEQLYGAGIA.SNYQGQG.LKLSKHFR-----------
I0IM71_LEPFC/2-351--------------RMNC.PPDKIYGQDIG.SNYSAQG.LKLSKYFS-----------
F8J4V2_HYPSM/17-374--------------RMIE.TPATLYGQGLK.SNYQGQG.LKLSKHFK-----------
D5BMT1_PUNMI/8-370--------------PMSA.IPETLYGSGGSGSNYQSQG.LRLAKHF.-----------
A1B368_PARDP/7-360--------------RMAA.RPERLYGSGIA.SNYQGQG.LKLAKQF.-----------
E0TCQ3_PARBH/11-366--------------RLTR.PVSRRYGEALK.SHYHGQG.LRLSKHFA-----------
F2IY64_POLGS/9-367--------------HMAE.RPRRLYGEGIG.SNYQGQA.LKLSKHFK-----------
D5AUM0_RHOCB/3-361--------------RMAG.RPERLYGAGIA.SNYQGQG.LKLAKHFR-----------
Q28RG4_JANSC/9-360--------------TMAS.APSQLYGTDIA.SNYQGQG.LKLSKHFA-----------
W8S3S8_9RHOB/5-358--------------RMAH.APEQLYGADLA.SNYQGQG.LKLSKHFK-----------
V5SAL4_9RHIZ/10-372--------------RMTE.LPDQLYGSDLG.SHYQAQG.LKLSKHFK-----------
M9RD28_9RHOB/2-357--------------HMSQ.TPAALYGQDIK.SNYQGQG.LKLSKHFK-----------
C6XMA9_HIRBI/10-342--------------PMVA.NPKVPYGAAGSFSNYQGQG.LKLSKHF.-----------
Q0BYT8_HYPNA/2-334--------------PMTE.KPRHLYG.GQG.SNYQGQG.LKLSKHFA-----------
Q3J368_RHOS4/2-356--------------RMEE.RPDMLYGAGIA.SNYQGQG.LKLAKHFR-----------
B8IN71_METNO/5-360--------------RMAE.RPAALYGAQAG.SNYQAQG.LKLSKHF.-----------
A8ILD7_AZOC5/12-371--------------RMAA.RPDHLYGEALG.SNYQGQG.LKLSKHFR-----------
V9TRV1_9PROT/16-380--------------RIASGKTKIIYGTALK.SNYQGQK.MTLAKHF.-----------
G8PHJ6_PSEUV/2-361--------------HMQE.VPETLYGEGIG.SNYQGQA.LKLSKHFR-----------
B2III7_BEII9/27-392--------------KMAE.APLSVYGQLEG.AHYQGQG.LKLSKHFQ-----------
I7DZH0_PHAIB/12-367--------------KMSE.VPEQLYGVDIA.SNYQGQG.LKLSKHFK-----------
D8PJ22_9BACT/7-382--------------RMLT.VPTQVYGTALG.SSYQRQA.LTLSKHFK-----------
G4R8T6_PELHB/6-364--------------KMAE.RPEMLYGSALG.SNYQAQS.LKLSKHFK-----------
M4Q6K7_LIBAS/2-364--------------SMDG.EPERLYGEARG.SHYQSQA.LKLSKHFH-----------
Q92S94_RHIME/4-363--------------HMLE.RPEGLYGLDLG.SNYQAQG.LKLSKHFR-----------
B8ELJ2_METSB/17-383--------------KMAE.APHALYGEGEG.SNYQGQG.LKLSKHF.-----------
Q3SWD3_NITWN/9-367--------------KMLA.RPDAMYGQRIG.SNYQAQG.LKLSKHFR-----------
D7A3W4_STAND/8-367--------------RMQE.LPRTLYGEGLG.SNYQAQG.LKLSKHFR-----------
J7Q6T1_METSZ/2-364--------------RMAE.TPKALYGQSGV.SNYQGQG.LKLSKHFM-----------
C5B418_METEA/18-375--------------RMAA.RPDALYGTAKA.SHYQGQS.IRLGKVFD-----------
Q6G4R3_BARHE/4-362--------------QMLK.RPLALYGEDSG.SHYQAQG.LKLSKHFR-----------
C5AS03_METEA/8-364--------------RMLE.RPATLYGAGAG.SNYQAQG.LKLSKHFA-----------
A7HQ50_PARL1/26-383--------------RLTD.RPTVLYGAGLG.SNYQRQG.LKLSKHFR-----------

PF06284

UL84_HCMVM/1-586PSQQQLSVLGASIALEDLLPMRLASPETEPQDCKLTEN-TTEKTSPVTLAMVCGD---

PF06501

VU55_HHV6U/3-432DKPFDVHFMGNCF-PAYLLPELTLHPL...EYEDKPAR-GNPQTLPSVEKHSIIKIRI
V55B_HHV7J/5-430PESDALYFLADKI-FISDLPDLILRKGWSARKKKLQSG-SNIN....NHAPSKSRLRF
O56289_9BETA/6-427...FRINFLGNDF-FSDSLPILTVHPMTDFPYEQIQET-ENIRHNSMNITPRFKRMQL

PF05784

VU54_HHV6U/4-339--------------PKQILPP-------------------------------------
PP71_HCMVM/28-371--------------RRGFWT.-------------------------------------
PP65_HCMVM/15-357--------------DIDLLL.-------------------------------------

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (C,A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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