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162  structures 19264  species 12  interactions 79505  sequences 336  architectures

Clan: GH_CE (CL0158)

Summary

Glycoside hydrolase/deacetylase superfamily Add an annotation

This superfamily contains diverse enzymes that act on carbohydrates including both hydrolases and deacetylases.

This clan contains 6 families and the total number of domains in the clan is 79505. The clan was built by A Bateman.

Members

This clan contains the following 6 member families:

DUF2334 Glyco_hydro_38 Glyco_hydro_57 LamB_YcsF Polysacc_deac_1 Polysacc_deac_3

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Polysacc_deac_1 (PF01522) 52617 (66.2%) View
LamB_YcsF (PF03746) 12601 (15.8%) View
Glyco_hydro_38 (PF01074) 8836 (11.1%) View
Glyco_hydro_57 (PF03065) 3817 (4.8%) View
DUF2334 (PF10096) 1558 (2.0%) View
Polysacc_deac_3 (PF15421) 76 (0.1%) View
Total: 6 Total: 79505 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 12 interactions for this clan. More...

Interacting families
A B
Alpha-mann_mid Glyco_hydro_38
DUF1925 Glyco_hydro_57
DUF1926 Glyco_hydro_57
Glyco_hydro_38 Alpha-mann_mid
Glyco_hydro_38
Glyco_hydro_38C
Glyco_hydro_38C Glyco_hydro_38
Glyco_hydro_57 DUF1925
DUF1926
DUF1957
Glyco_hydro_57
Polysacc_deac_1 Polysacc_deac_1

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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