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678  structures 3148  species 59  interactions 97834  sequences 1312  architectures

Clan: MBB (CL0193)

Summary

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
TonB_dep_Rec (PF00593) 37832 (38.7%) View
Bac_surface_Ag (PF01103) 6494 (6.6%) View
OMP_b-brl (PF13505) 5834 (6.0%) View
Porin_4 (PF13609) 3529 (3.6%) View
Autotransporter (PF03797) 2785 (2.8%) View
OMP_b-brl_3 (PF14905) 2774 (2.8%) View
Porin_3 (PF01459) 2735 (2.8%) View
OMP_b-brl_2 (PF13568) 2708 (2.8%) View
Toluene_X (PF03349) 1978 (2.0%) View
OprB (PF04966) 1616 (1.7%) View
ShlB (PF03865) 1557 (1.6%) View
PorP_SprF (PF11751) 1480 (1.5%) View
OstA_C (PF04453) 1458 (1.5%) View
Porin_O_P (PF07396) 1415 (1.4%) View
Usher (PF00577) 1247 (1.3%) View
Phenol_MetA_deg (PF13557) 1246 (1.3%) View
MipA (PF06629) 1175 (1.2%) View
OmpW (PF03922) 1093 (1.1%) View
DUF481 (PF04338) 1069 (1.1%) View
Gcw_chp (PF09694) 988 (1.0%) View
OprD (PF03573) 905 (0.9%) View
Alginate_exp (PF13372) 904 (0.9%) View
YadA_anchor (PF03895) 846 (0.9%) View
PagL (PF09411) 833 (0.9%) View
PLA1 (PF02253) 666 (0.7%) View
CopB (PF05275) 642 (0.7%) View
DUF2490 (PF10677) 618 (0.6%) View
BBP2_2 (PF10082) 596 (0.6%) View
DUF3575 (PF12099) 564 (0.6%) View
Porin_2 (PF02530) 521 (0.5%) View
LamB (PF02264) 518 (0.5%) View
BBP2 (PF07642) 512 (0.5%) View
DUF3078 (PF11276) 495 (0.5%) View
Caps_assemb_Wzi (PF14052) 475 (0.5%) View
YjbH (PF06082) 470 (0.5%) View
MDM10 (PF12519) 458 (0.5%) View
DUF2219 (PF09982) 452 (0.5%) View
Porin_1 (PF00267) 446 (0.5%) View
OmpA_membrane (PF01389) 395 (0.4%) View
DUF560 (PF04575) 388 (0.4%) View
Porin_10 (PF14121) 355 (0.4%) View
Channel_Tsx (PF03502) 326 (0.3%) View
IAT_beta (PF11924) 296 (0.3%) View
BCSC_C (PF05420) 268 (0.3%) View
Porin_5 (PF16930) 266 (0.3%) View
continued
Pfam family Num. domains Alignment
MSP (PF01716) 265 (0.3%) View
TbpB_B_D (PF01298) 260 (0.3%) View
HP_OMP (PF01856) 251 (0.3%) View
TraF_2 (PF13729) 202 (0.2%) View
YfaZ (PF07437) 196 (0.2%) View
DUF4421 (PF14391) 187 (0.2%) View
KdgM (PF06178) 176 (0.2%) View
Surface_Ag_2 (PF01617) 170 (0.2%) View
PagP (PF07017) 163 (0.2%) View
Omptin (PF01278) 124 (0.1%) View
Legionella_OMP (PF05150) 120 (0.1%) View
MtrB_PioB (PF11854) 111 (0.1%) View
DUF5020 (PF16412) 103 (0.1%) View
DUF2860 (PF11059) 97 (0.1%) View
DUF3187 (PF11383) 90 (0.1%) View
UPF0164 (PF03687) 89 (0.1%) View
Porin_7 (PF16956) 88 (0.1%) View
Porin_8 (PF16966) 85 (0.1%) View
DUF3373 (PF11853) 81 (0.1%) View
HP_OMP_2 (PF02521) 80 (0.1%) View
DUF4595 (PF15283) 73 (0.1%) View
OprF (PF05736) 59 (0.1%) View
BBP7 (PF07585) 53 (0.1%) View
Ail_Lom (PF06316) 52 (0.1%) View
Pom (PF17251) 49 (0.1%) View
Campylo_MOMP (PF05538) 49 (0.1%) View
Opacity (PF02462) 45 (0.0%) View
DUF3138 (PF11336) 43 (0.0%) View
Omp_AT (PF11557) 36 (0.0%) View
DUF2715 (PF10895) 31 (0.0%) View
Lipoprot_C (PF08794) 29 (0.0%) View
OmpA_like (PF16961) 28 (0.0%) View
Porin_OmpG_1_2 (PF16946) 16 (0.0%) View
Porin_OmpG (PF09381) 14 (0.0%) View
MOSP_C (PF02722) 13 (0.0%) View
Usher_TcfC (PF17271) 12 (0.0%) View
Chlam_OMP (PF01308) 11 (0.0%) View
HpuA (PF16960) 10 (0.0%) View
Porin_OmpL1 (PF11389) 10 (0.0%) View
Porin_6 (PF16939) 10 (0.0%) View
TSA (PF03249) 8 (0.0%) View
CymA (PF16941) 7 (0.0%) View
DUF3573 (PF12097) 6 (0.0%) View
OpcA (PF07239) 4 (0.0%) View
Total: 89 Total: 97834
No alignment ℹ
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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