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798  structures 5614  species 59  interactions 199267  sequences 1993  architectures

Clan: MBB (CL0193)

Summary

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
TonB_dep_Rec (PF00593) 80037 (40.2%) View
Bac_surface_Ag (PF01103) 12118 (6.1%) View
OMP_b-brl (PF13505) 11450 (5.7%) View
Porin_4 (PF13609) 7626 (3.8%) View
OMP_b-brl_3 (PF14905) 6774 (3.4%) View
OMP_b-brl_2 (PF13568) 6358 (3.2%) View
Autotransporter (PF03797) 5464 (2.7%) View
Porin_3 (PF01459) 4008 (2.0%) View
Toluene_X (PF03349) 3899 (2.0%) View
PorP_SprF (PF11751) 3865 (1.9%) View
ShlB (PF03865) 3078 (1.5%) View
OprB (PF04966) 2963 (1.5%) View
LptD (PF04453) 2788 (1.4%) View
Porin_O_P (PF07396) 2676 (1.3%) View
Phenol_MetA_deg (PF13557) 2546 (1.3%) View
MipA (PF06629) 2252 (1.1%) View
OmpW (PF03922) 2252 (1.1%) View
Usher (PF00577) 2142 (1.1%) View
OprD (PF03573) 2041 (1.0%) View
DUF481 (PF04338) 1975 (1.0%) View
Gcw_chp (PF09694) 1920 (1.0%) View
Alginate_exp (PF13372) 1812 (0.9%) View
PagL (PF09411) 1715 (0.9%) View
YadA_anchor (PF03895) 1560 (0.8%) View
DUF2490 (PF10677) 1464 (0.7%) View
PLA1 (PF02253) 1278 (0.6%) View
CopB (PF05275) 1263 (0.6%) View
BBP2 (PF07642) 1246 (0.6%) View
BBP2_2 (PF10082) 1177 (0.6%) View
DUF3078 (PF11276) 1170 (0.6%) View
DUF3575 (PF12099) 1093 (0.5%) View
Porin_2 (PF02530) 1091 (0.5%) View
DUF2219 (PF09982) 946 (0.5%) View
Caps_assemb_Wzi (PF14052) 932 (0.5%) View
LamB (PF02264) 924 (0.5%) View
YjbH (PF06082) 895 (0.4%) View
MDM10 (PF12519) 858 (0.4%) View
Porin_10 (PF14121) 785 (0.4%) View
Porin_1 (PF00267) 714 (0.4%) View
DUF560 (PF04575) 707 (0.4%) View
OmpA_membrane (PF01389) 706 (0.4%) View
Channel_Tsx (PF03502) 668 (0.3%) View
Porin_5 (PF16930) 546 (0.3%) View
IAT_beta (PF11924) 523 (0.3%) View
BCSC_C (PF05420) 505 (0.3%) View
TbpB_B_D (PF01298) 462 (0.2%) View
continued
Pfam family Num. domains Alignment
HP_OMP (PF01856) 460 (0.2%) View
DUF4421 (PF14391) 413 (0.2%) View
MSP (PF01716) 394 (0.2%) View
TraF_2 (PF13729) 370 (0.2%) View
YfaZ (PF07437) 337 (0.2%) View
KdgM (PF06178) 283 (0.1%) View
Legionella_OMP (PF05150) 278 (0.1%) View
PagP (PF07017) 266 (0.1%) View
Surface_Ag_2 (PF01617) 241 (0.1%) View
Porin_7 (PF16956) 215 (0.1%) View
Omptin (PF01278) 206 (0.1%) View
MtrB_PioB (PF11854) 199 (0.1%) View
UPF0164 (PF03687) 192 (0.1%) View
DUF5020 (PF16412) 171 (0.1%) View
HP_OMP_2 (PF02521) 162 (0.1%) View
DUF2860 (PF11059) 153 (0.1%) View
DUF3187 (PF11383) 144 (0.1%) View
DUF3373 (PF11853) 142 (0.1%) View
OprF (PF05736) 136 (0.1%) View
Porin_8 (PF16966) 129 (0.1%) View
Ail_Lom (PF06316) 122 (0.1%) View
DUF4595 (PF15283) 106 (0.1%) View
BBP7 (PF07585) 102 (0.1%) View
DUF3138 (PF11336) 101 (0.1%) View
Pom (PF17251) 89 (0.0%) View
Campylo_MOMP (PF05538) 83 (0.0%) View
Opacity (PF02462) 80 (0.0%) View
Omp_AT (PF11557) 60 (0.0%) View
Lipoprot_C (PF08794) 50 (0.0%) View
OmpA_like (PF16961) 42 (0.0%) View
DUF2715 (PF10895) 31 (0.0%) View
Porin_OmpG (PF09381) 31 (0.0%) View
TbpB_C (PF17483) 30 (0.0%) View
Porin_OmpG_1_2 (PF16946) 26 (0.0%) View
Usher_TcfC (PF17271) 22 (0.0%) View
DUF3573 (PF12097) 22 (0.0%) View
Porin_OmpL1 (PF11389) 18 (0.0%) View
Chlam_OMP (PF01308) 16 (0.0%) View
HpuA (PF16960) 15 (0.0%) View
MOSP_C (PF02722) 13 (0.0%) View
Porin_6 (PF16939) 13 (0.0%) View
CymA (PF16941) 12 (0.0%) View
OpcA (PF07239) 11 (0.0%) View
TSA (PF03249) 9 (0.0%) View
Total: 90 Total: 199267
No alignment ℹ
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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