Sequence alignment for CL0201

PF04586

Q8XLC1_CLOPE/14-176--------------------------SDLITRTLE...DTEE..KVISGYIN----------KFN---TLSQYLG.....
Q73HU3_WOLPM/8-161--------------------------SPLSIK...SIGENGV....FSGYAS----------VFN---IVDK........
Q830G5_ENTFA/12-173--------------------------TNLKTRSEE...DSQT..QIVTGYAA----------VFN---SPTELWE....G
Q81Z10_BACAN/15-178--------------------------QKIEIREDD....NGN..RTLIGYAV----------KWE---KKSVVMGYY.RK
Q81XX9_BACAN/12-175--------------------------SALEIRELE....NGL..RTISGYAV----------KWE---MKSVTMGYW.QR
Q8DXJ7_STRA5/5-163--------------------------KTFVVKSVEDESADFH....FEAYAS----------TYD---NTDR........
Q813K0_BACCR/5-168--------------------------EEVKRMKIEVRGNQVI....LDGYVN----------VVD---RESRMLPSPRGY
Q88MK5_PSEPK/15-174--------------------------FDYDVKAVGDDGL.......FSGYGS----------VFG---VVDS........
Q6N8L6_RHOPA/13-166--------------------------SPAPLPARLSLAEDGS....IDGYAS----------LFG---EIDQ........
Q8XYS5_RALSO/12-178--------------------------QLCELRSSE...AGAESVPTIYGYAA----------VFN---TRSALIAG...L
Q6NK35_CORDI/146-313--------------------------KSYDVSIDETQTEGT.....ITAYAS----------VFG---NVDS........
Q2G1W7_STAA8/11-173--------------------------..IEVRSND...NNE...MVIEGYAL----------KFD---TWSENLG....G
Q9CGQ7_LACLA/14-175--------------------------.SLDLNAND...EAAE..KIISGYFI----------VFN---SETELYE....G
Q9CI95_LACLA/13-174--------------------------.ELETRSPT..NTGFI..GQIAGYAI----------KFN---TPSTAMA....P
Q9ZXB1_BPPHC/15-176--------------------------..LEERASD...DGRI...SMRGYAY----------RFN---ELSHDLG....G

PF00716

SCAF_VZVD/28-373ELNITPEIVRSALPPTS........KIPINIDHRKDCVVGEVIAIIEDIRGPFFLGIVRCPQLHA---VLFEAAHSNFFG
SCAF_HHV11/37-365ELALDPDTVRAALPPDN........PLPINVDHRAGCEVGRVLAVVDDPRGPFFVGLIACVQLER---VLETAASAAIFE
SCAF_EBVB9/24-327CLHLDPLTVKSQLPLKK........PLPLTVEHLPDAPVGSVFGLYQSRAGLFSAASITSGDFLS---LLDSIYHDCDIA
SCAF_EHV2/58-381ALYLNPADVGAHLPLPG........PIPLNVEHLQEAHVGWTLGLHLTRYGLFCVAVITAEEFFT---LLDRLCAASSVA
SCAF_HCMVM/31-414ELLLPRDVVEHWLHAQGQGQPSLSVALPLNINHDDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLE---IVRRASEKSELV

PF14550

D4MX42_9FIRM/23-149--------------------------NRVDITKKD.EEKQYVFGWAKIAVDE------------NGNQLIDRQNDL....
Q08QA7_STIAD/309-425--------------------------..PLLKGVEPDDERYVLG...VVLEP------------E...TVDAQGDI....
D4LIB0_9FIRM/21-145--------------------------..FKVQKVD.EDKRLVFGWANVSVDV------------GGNEVVDLQEDM....
B0VGF6_CLOAI/86-209--------------------------NSSKFKSETSGTQGRLYV...TLMEP------------N...IHDSQGDY....
L0AM66_NATGS/15-132--------------------------DVEFVSKND..DEQIATG...IVMVP------------D...AVDRQYDF....
E3E570_PAEPS/39-161--------------------------QVRLITKTD.DPKQLVYG...VVYEP------------D...AEDTHGDI....
A8FGQ7_BACP2/40-155--------------------------EVSVLTKAE.DAHRLVYG...VVYEP------------N...TPDAHQDF....
R7DEN0_9FIRM/81-194--------------------------....IVKAD.EDKHYVTG...IVYEP------------M...TEDTDGNY....
N0AUF1_9BACI/41-158--------------------------EVKIIMKSE.DEQQLVYG...VVYEP------------D...VADAHDDI....
XKDF_BACSU/39-157--------------------------KVRLFTKSEQDEQKLVYG...IVYEP------------D...VPDAHGDF....
C4ZCA6_EUBR3/27-152--------------------------.RFKIAKSD.DDKHLAFGWANVAIRA------------DGEEIEDWQEDI....
YQBD_BACSU/39-156--------------------------EVRILAKEA.DEQKLVYG...IVYEP------------D...TVDAHGDF....
H1XPV5_9BACT/40-158--------------------------TVP.ILKVD.AEKRMVYG...IVYAP------------N...EEDAHGDF....
D3DZY3_METRM/3-133--------------------------NILEVVTKS.RDSLLITA...PVLIP------------G...ERDCEFDYGEEP
A0RNP3_CAMFF/39-157--------------------------SVK.IAKND.TEKGIVYG...IVYSP------------D...EIDTQGDA....
R6JHS6_9CLOT/36-161--------------------------.RFKIHKSD.DDEMLAFGWANVAITS------------DGEQVTDLQEDI....
K8ESL9_CARML/40-156--------------------------TVRTITKAD.DPQKLVYG...VVYEP------------D...VKDAHDDF....

PF03420

Q6WHE3_BPKVM/5-184-LLIEDWGVSSYATAETGE....KPLVEAKMPAEKGGD......LYIEGIFM----------QSN---VVNRNGRR----
PCPP_BPT4/6-190-LLIETWG.......QPGEIIDGVPMLE....SHDGKDLGLKPGLYIEGIFM----------QAE---VVNRNKRL----

PF04586

Q8XLC1_CLOPE/14-176FFEEVLPGAFDKTLADGHN....IYA---------------------MYNHNSDMILGSTKSGSLKLNT--DEVGLHFEL
Q73HU3_WOLPM/8-161QNDLILPGAFKENLNRNK.....IKL---------------------LWQHNPDEPIGSII....DIYE--NDVGLYITA
Q830G5_ENTFA/12-173LNEVIKPGAFSRALSN.SD....VRC---------------------LFDHDWGKVLGRTRSGTLKLEE--DDKGLRFEV
Q81Z10_BACAN/15-178FREQFKNGAFTETLQN.DD....QRF---------------------LWSHDTSKVLGRTKNNTLRLNE--DAVGLRFEL
Q81XX9_BACAN/12-175FKEQFKKGAFTESLTQ.DD....QLA---------------------LWSHDTSQVLGRTKNGTLRLFE--DEIGLRFEL
Q8DXJ7_STRA5/5-163EGDVMAKGCFDNTLKSKAV....VPM---------------------CLNHDRNCVIGKH.....ELSV--DEKGLRTRS
Q813K0_BACCR/5-168FKERIVPKTFEKALKKAKN....VDL---------------------LFNHDKNRNLGSIENGNLELYE--DNIGLRAIA
Q88MK5_PSEPK/15-174YNEVVAPGAFLESIAEAKAKGRTFPV---------------------LWQHRTGEPIGSWNIE..SLKE--DDRGLFGEG
Q6N8L6_RHOPA/13-166ARDMVMPGAFTQTLKQRGLR..KIPM---------------------LFQHDPAEPVGVWL....ELAE--DLRGLRARG
Q8XYS5_RALSO/12-178FVEEIMPGAFDGVLGD..D....VRA---------------------LFNHDPNFVLGRTRSNTLQISV--DSRGLAYTV
Q6NK35_CORDI/146-313YGDVVIPGAFEETLGEWQKSGNTIPL---------------------LYGHDFKDPFSNIGGVT.SAVE--DAHGLKITA
Q2G1W7_STAA8/11-173FKETISRRALENTDLS..D....VRC---------------------LVDHIPSQIIGRTKSGTLELET--DDVGLKYRC
Q9CGQ7_LACLA/14-175CFEEISPESFDNVDLS..D....VRA---------------------LIDHETSKVLGRTKSGTLTLSV--DAKGVYGEI
Q9CI95_LACLA/13-174FIEYIAPIALDNVDLS..D....VLA---------------------LYNHDYANVLGRVDAGTLKLSI--DKVGLHFVL
Q9ZXB1_BPPHC/15-176FRERIVPGAGAPSLRQ.ND....VYA---------------------TFNHDTRSLLGRTSSGTLRVGE--DREGGWYEI

PF00716

SCAF_VZVD/28-373NRDS.VLSPLERALYLVTNYLPSVSLSSKR....LSPNEIP...DGNFFTHVALCVVGRRVGTVVNYDC--TPESSIEPF
SCAF_HHV11/37-365RRGP.PLSREERLLYLITNYLPSVSLATKR....LGGEAHP...DRTLFAHVALCAIGRRLGTIVTYDT--GLDAAIAPF
SCAF_EBVB9/24-327QSQR.LPLPREPKVEALHAWLPSLSLASLH...PDIPQTTADGGKLSFFDHVSICALGRRRGTTAVYGT--DLAWVLKHF
SCAF_EHV2/58-381RTRADHHLPPNPTLEMLHTWLPELSLSSIH...PDALPGAKG.GDTPIFQHVALCAMGQRRGTVAVYGE--SLDWILSKF
SCAF_HCMVM/31-414SRGPVSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEAATSLSG.SETTPFKHVALCSVGRRRGTLAVYGR--DPEWVTQRF

PF14550

D4MX42_9FIRM/23-149IDPEELEQTAYTYVEFY..----------------------------...REAGEMH..ERGGA..GVL--IESIIF...
Q08QA7_STIAD/309-425YSAAEIRQAAHRFMEEF..----------------------------...GGLGLMHQMRVNGH..VKV--LESYLA...
D4LIB0_9FIRM/21-145IDPETLEAAAYKFAELY..----------------------------...RDGGEMH..ERTGT..AVM--VESVVL...
B0VGF6_CLOAI/86-209YTREEIQKACDHFAKHGLV----------------------------...GKCDVNHNMQPVPE..FTV--VENYILKTS
L0AM66_NATGS/15-132VHEDTIREFADQF.ETFVD----------------------------AGEAGGGIMH.........AVF--PDEWMDLER
E3E570_PAEPS/39-161MTADEIEKAVHGFMSNLAI----------------------------AKGAVMDTQHDFD.PGV..GDV--VECYVA...
A8FGQ7_BACP2/40-155MTAKEIERAAHGFMKDA..----------------------------...RHIDKQHDFQ.DGV..GEV--VESYIA...
R7DEN0_9FIRM/81-194MTEEEITKAAHWFMKNS..----------------------------...GKPDIQHCFEKADN..VEI--VESYVA...
N0AUF1_9BACI/41-158MNADEIEKAAHKFMKDF..----------------------------...RNIDTQHDFE.RGA..GEL--VESYIA...
XKDF_BACSU/39-157MTAEEIEKAAHGFLAEA..----------------------------...REIDINHSFE.GGT..GVV--VESYVA...
C4ZCA6_EUBR3/27-152IEPEELENAAYQYVLLY..----------------------------...REGGEMH..ERGGA..AVL--VESVVF...
YQBD_BACSU/39-156MTAAEIEKAAHGFLKDA..----------------------------...RQIDKQHDFQ.GGV..GEV--VESYVA...
H1XPV5_9BACT/40-158MTAEEIEKAAHNFMKARRT----------------------------...TNIDKQHDYE.ADE..GFV--AESWIVRKG
D3DZY3_METRM/3-133LTEGQIRQIAHEYLANY..----------------------------...SLVDKNHEFFETREVIGVP--VESYITNEP
A0RNP3_CAMFF/39-157ASAAEIEKAAFSFMKGLNI----------------------------...KNVDRDHNFK.PEG..AYI--CESWIVKSG
R6JHS6_9CLOT/36-161VDPDVLEHAAYNFVEFY..----------------------------...REGGEMH..ERGGC..AVL--VESIMF...
K8ESL9_CARML/40-156MTAEEIEKAAHGFMQNY..----------------------------...QQIDKQHDFE.AGA..GTV--VQSYIA...

PF03420

Q6WHE3_BPKVM/5-184YPKKVMENAVSKYIQEQVKTNQALG----------------------ELNHPSRSNVDPAEAAIRITELWWDGDNVMGKA
PCPP_BPT4/6-190YPKRILEKAVKDYINEQVLTKQALG----------------------ELNHPPRANVDPMQAAIIIEDMWWKGNDVYGRA

PF04586

Q8XLC1_CLOPE/14-176KI.NSNISYANDL-------------------.YELVSNGDIDG-CSFGFYVL.-.DDEWTYTE....DKVD...LRKVK
Q73HU3_WOLPM/8-161HL.LLGIQKAEEV-------------------.YLMLKTGTING-LSIGYIPI.-.EYDVDHKS...G.......ARVLK
Q830G5_ENTFA/12-173EL..PNTTVANDL-------------------.IQSMSRGDINQ-CSFGFYPT.-.EETWDYSS....DPVL...R.TIH
Q81Z10_BACAN/15-178DL..PDTTLGNDT-------------------.YKSIKRGDVDG-VSFGFSMI.-.SEEIQEPD....DDLM...LRTVT
Q81XX9_BACAN/12-175DL..ANTTLGNDT-------------------.YETIKRGDVDG-VSFGFQMV.-.KEEWDESD....PDNV...VRSVT
Q8DXJ7_STRA5/5-163TF.NLSDPEAKKT-------------------.YDLMKMGALDS-LSIGFFIK.-......DYEP.IDAKQPY.GGWIFK
Q813K0_BACCR/5-168TV..TDEQVIKKA-------------------.....RNKELRG-WSFGFVSE.-.KDSWEEGE....SGVQ...KRSIE
Q88MK5_PSEPK/15-174GLWLADAPYARIA-------------------.HRGMQTRSITG-LSIGYYVR.-.ESSFDEKT...R.......IRTLT
Q6N8L6_RHOPA/13-166RL.IPDVARGREL-------------------.LALLRAGAIDG-LSIGYRTV.-.RGQIDPRT...R.......VRRLY
Q8XYS5_RALSO/12-178TP..PNTQTVRDL-------------------LLAPMARGDING-SSFSFRVAP-DGDEWRKEG....E.LV...VRTIH
Q6NK35_CORDI/146-313QL.DLDNPKARQV-------------------.YNLLKAKRLSQ-MSFAFDVV.-.EGSWGEREQ.QE.......VYELK
Q2G1W7_STAA8/11-173KL..PNTTFARDL-------------------.YENMRVGNINQ-CSFGFMLDD-KGDEVRFDE....QENI..YKRTLT
Q9CGQ7_LACLA/14-175KV.NENDTEAMNL-------------------.YSRVQRGDVDQ-CSFGFNIL.-.DEAMETRD....DGSY...KFTIK
Q9CI95_LACLA/13-174DM..PDTTVGHDV-------------------.YNNIKAGNLKG-MSFGFSVAD-GGDSWQQGA....D.SP...IRIIN
Q9ZXB1_BPPHC/15-176DL..PDTTVGRDV-------------------.AELLKRGDLQG-SSFTFRVLD-GG..QRRADDDDPE..TGLPVREIT

PF00716

SCAF_VZVD/28-373RVLSMESKARLLS...LVKDYAGLN..KVWKVSEDKLAKVLLST-AVNNMLLRD-RWDVVAKRRREAGIM.GHVYLQAST
SCAF_HHV11/37-365RHLSPASREGARRLAAEAELALSG...RTWAPGVEALTHTLLST-AVNNMMLRD-RWSLVAERRRQAGIA.GHTYLQASE
SCAF_EBVB9/24-327SDLEPSIAAQIENDANAAKRESG......CPEDHPLPLTKLIAK-AIDAGFLRN-RVETLRQDRGVANIP.AESYLKASD
SCAF_EHV2/58-381TSLSPEERGAIAE....GYASPA.P.ESLPEPHFTCSNEILMAK-AIDAGFIKN-RLEILKTDKGVAEVK.APTYLKASV
SCAF_HCMVM/31-414PDLTAADRDGLRA....QWQRCGSTAVDASGDPFRSDSYGLLGN-SVDALYIRE-RLPKLRYDKQLVGVTERESYVKASV

PF14550

D4MX42_9FIRM/23-149.....TKEKMKTL----------------------GIEEGTLPEGWWVGFHITD..DDVWAKIK-----------DGTYT
Q08QA7_STIAD/309-425....PVDFNLGEV----------------------PVRKGT....WLLAVRVLS..DELWGRVK-----------DGQLT
D4LIB0_9FIRM/21-145.....TEEKQTAM----------------------GLAAGTLPVGWWIGFRVTD..DDVWEKVK-----------SGEYS
B0VGF6_CLOAI/86-209DREHFPDTKVGA.----------------------..........WVQVLKCEDLGSELWQKVE-----------KGEFN
L0AM66_NATGS/15-132NEVLDEAEEIGGT----------------------EAPAGA....WVQEWRINH..ADLWQLIV-----------DEIIA
E3E570_PAEPS/39-161....PVDFEMGEE----------------------TIKKGS....W.VLVTKAS..DDIWEKIQ-----------NEEVT
A8FGQ7_BACP2/40-155....PADVEVGGE----------------------LIRKGS....W.VLVTKAS..QEIWDQIQ-----------KGHIT
R7DEN0_9FIRM/81-194....KSDMEIEGQ----------------------QIKKGT....WLMTMEVAD..DDVWGKIE-----------KGEIT
N0AUF1_9BACI/41-158....PVDMDIDGE----------------------IITKGS....W.VMVTKAT..DDIWESIK-----------KGEFT
XKDF_BACSU/39-157....PDDFMIGSK----------------------RITKGS....W.VLVTRAS..DEVWEQIK-----------AGIIT
C4ZCA6_EUBR3/27-152.....TEEKMQAM----------------------GIPAGTLPIGWWIGFKVTD..EDVWEKVK-----------DGTYP
YQBD_BACSU/39-156....PADFEMNGE----------------------TIKKGS....W.VLVTKAS..EEVWEQIK-----------KGEIT
H1XPV5_9BACT/40-158DPLFPNE......----------------------..PEGA....WGVGIKVEN..DETWEQIK-----------NGEIT
D3DZY3_METRM/3-133ISLKGLDGTVNEY----------------------..PKGT....WIATTRITD..EEEMEKAL-----------NGEYT
A0RNP3_CAMFF/39-157DPLFPNE......----------------------..KEGS....WAVGIKLES..DELKEAVK-----------KGDLK
R6JHS6_9CLOT/36-161.....TKEKMAVM----------------------GIPEGTLPEAWWIGFRVTD..PDVWDKVK-----------SGEYP
K8ESL9_CARML/40-156....PCDLELG.E----------------------TIQKGS....W.VLVTKAT..DEIWESIQ-----------KGEFT

PF03420

Q6WHE3_BPKVM/5-184IVLNTPK..GQIV-------------------------RGLIEGGWVPGVSSRG--LGSVKQVDG....INEVQDFRLTV
PCPP_BPT4/6-190RVIEGDHGPGDKL-------------------------AANIRAGWIPGVSSRG--LGSLTDTNEGYRIVNE..GFKLTV

PF04586

Q8XLC1_CLOPE/14-176EVE.LIEVTITPF.PA-----------------------------YLDS..E....ASCRSFELHNKE------------
Q73HU3_WOLPM/8-161QVE.LWKVSLVTF.PA-----------------------------NLAAQVIN..VKNQNNEQGVLAR------------
Q830G5_ENTFA/12-173EVE.LYEVSIVSL.PA-----------------------------YEDTEAA....LSRNK.QEMKQD------------
Q81Z10_BACAN/15-178KAK.LLEVSAVAF.PA-----------------------------YPDS..E....VSARGYDPYKHF------------
Q81XX9_BACAN/12-175KAK.LLEISPVAF.PA-----------------------------YPDS..Q....VSARSHDPYKQF------------
Q8DXJ7_STRA5/5-163EVE.IFEISVVTV.PA-----------------------------NPQATVD...NIKEFDMSAVDKR------------
Q813K0_BACCR/5-168ELE.LLEVSILDMTPA-----------------------------YVATSIE.......TRGENTAMI------------
Q88MK5_PSEPK/15-174KLD.LIEISIVTV.PA-----------------------------NDEARTD....TIKSKLAHGGLP------------
Q6N8L6_RHOPA/13-166QVD.LWEISIVTF.PL-----------------------------LSGARIA........TVKHTPRP------------
Q8XYS5_RALSO/12-178RFQTLIDVSPVTY.PA-----------------------------YDES..H....SAQRSLTAWRQA------------
Q6NK35_CORDI/146-313KVK.LYEVSVVPI.GA-----------------------------NQETSIIDVKAVVAEELANMLDS------------
Q2G1W7_STAA8/11-173AIRELTDVSVVTY.PA-----------------------------YKDTDVK....PALRSIETVKK.------------
Q9CGQ7_LACLA/14-175AIE.LFEVSVVTF.PA-----------------------------YADTAVE....ARSKQIENMEK.------------
Q9CI95_LACLA/13-174QLQTLSEISVVSR.PA-----------------------------YDDTSVQ.....VTRSMDAFL..------------
Q9ZXB1_BPPHC/15-176AMD.VVELGPVVN.PA-----------------------------YPTTQAS......LRSIEETL..------------

PF00716

SCAF_VZVD/28-373GYG-LARITNVNG-VESKLPNAGVI................NATFHPGG.......P.IYDLALGVGE............
SCAF_HHV11/37-365KFK-MWGAEPVSA-PARGYKNGAPE................STDIPPGSI....AAAPQGDRCPIVRQ............
SCAF_EBVB9/24-327APD-LQKPD....-KALQ...........................SPPP.............ASTDP.............
SCAF_EHV2/58-381QG.-.LPANLDEV-DSARG........................GEDPPTAAIATTPHPATDATTMNQQ............
SCAF_HCMVM/31-414SP.-.EAACVIKA-ASAERSGDSRSQAATPAAGARVPSSSPSPPVEPPSPVQPPALPASPSVLPAESPPSLSPSEPAEAA

PF14550

D4MX42_9FIRM/23-149MFS-IEGKAKRIE-------------------------------------------------------------------
Q08QA7_STIAD/309-425GFS-IGGTARR..-------------------------------------------------------------------
D4LIB0_9FIRM/21-145MFS-IGGTAIREE-------------------------------------------------------------------
B0VGF6_CLOAI/86-209GVS-IYGRADDY.-------------------------------------------------------------------
L0AM66_NATGS/15-132GYS-IGAI.....-------------------------------------------------------------------
E3E570_PAEPS/39-161GYS-MAGTAETIE-------------------------------------------------------------------
A8FGQ7_BACP2/40-155GYS-MAGTADI..-------------------------------------------------------------------
R7DEN0_9FIRM/81-194GFS-MGGTGNY..-------------------------------------------------------------------
N0AUF1_9BACI/41-158GYS-MAGTAETIE-------------------------------------------------------------------
XKDF_BACSU/39-157GYS-MAGTADVYE-------------------------------------------------------------------
C4ZCA6_EUBR3/27-152MFS-IEGEAERVE-------------------------------------------------------------------
YQBD_BACSU/39-156GYS-MAGTAETIE-------------------------------------------------------------------
H1XPV5_9BACT/40-158GIS-MGGFGKRIE-------------------------------------------------------------------
D3DZY3_METRM/3-133GYS-ITTVSKKFA-------------------------------------------------------------------
A0RNP3_CAMFF/39-157ALS-MAGTAIKEE-------------------------------------------------------------------
R6JHS6_9CLOT/36-161MFS-IEGEAVREE-------------------------------------------------------------------
K8ESL9_CARML/40-156GYS-LAGNAEVTE-------------------------------------------------------------------

PF03420

Q6WHE3_BPKVM/5-184GVDVVWGPSAPAA-------------------------------------------YVKP..VTESNE------------
PCPP_BPT4/6-190GVDAVWGPSAPDA-------------------------------------------WVTPKEITESQT------------

PF04586

Q8XLC1_CLOPE/14-176--------------------------------------------------------------------------------
Q73HU3_WOLPM/8-161--------------------------------------------------------------------------------
Q830G5_ENTFA/12-173--------------------------------------------------------------------------------
Q81Z10_BACAN/15-178--------------------------------------------------------------------------------
Q81XX9_BACAN/12-175--------------------------------------------------------------------------------
Q8DXJ7_STRA5/5-163--------------------------------------------------------------------------------
Q813K0_BACCR/5-168--------------------------------------------------------------------------------
Q88MK5_PSEPK/15-174--------------------------------------------------------------------------------
Q6N8L6_RHOPA/13-166--------------------------------------------------------------------------------
Q8XYS5_RALSO/12-178--------------------------------------------------------------------------------
Q6NK35_CORDI/146-313--------------------------------------------------------------------------------
Q2G1W7_STAA8/11-173--------------------------------------------------------------------------------
Q9CGQ7_LACLA/14-175--------------------------------------------------------------------------------
Q9CI95_LACLA/13-174--------------------------------------------------------------------------------
Q9ZXB1_BPPHC/15-176--------------------------------------------------------------------------------

PF00716

SCAF_VZVD/28-373.SNEDCEKTVPHLKVTQLCRNDSDMASVAGNASNISPQPPSGVPTGGEFVLIPTAYYSQLLTGQTKNPQVSIGAPNNGQY
SCAF_HHV11/37-365.RGVALSPVLPP.............MNPVPTSGTPAPAPPG....DGSYLWIPASHYNQLVAGHAAPQPQ......PHSA
SCAF_EBVB9/24-327..ATMLSGNAGEG................ATACGGSAAAG......QDLISVPRNTFMTLLQTNLDNKPPR.QTPLPYAA
SCAF_EHV2/58-381...QPFAAQAPAGG...............CEDLISVPRSTF.....MTMLQTNLDTMRQTSLGQRFGQPIDAP.AAPPAQ
SCAF_HCMVM/31-414SMSHPLSAAVPAATAPP.......GATVAGASPAVSSLAWP.....HDGVYLPKDAFFSLLGASRSAAPVMYPGAVAAPP

PF14550

D4MX42_9FIRM/23-149--------------------------------------------------------------------------------
Q08QA7_STIAD/309-425--------------------------------------------------------------------------------
D4LIB0_9FIRM/21-145--------------------------------------------------------------------------------
B0VGF6_CLOAI/86-209--------------------------------------------------------------------------------
L0AM66_NATGS/15-132--------------------------------------------------------------------------------
E3E570_PAEPS/39-161--------------------------------------------------------------------------------
A8FGQ7_BACP2/40-155--------------------------------------------------------------------------------
R7DEN0_9FIRM/81-194--------------------------------------------------------------------------------
N0AUF1_9BACI/41-158--------------------------------------------------------------------------------
XKDF_BACSU/39-157--------------------------------------------------------------------------------
C4ZCA6_EUBR3/27-152--------------------------------------------------------------------------------
YQBD_BACSU/39-156--------------------------------------------------------------------------------
H1XPV5_9BACT/40-158--------------------------------------------------------------------------------
D3DZY3_METRM/3-133--------------------------------------------------------------------------------
A0RNP3_CAMFF/39-157--------------------------------------------------------------------------------
R6JHS6_9CLOT/36-161--------------------------------------------------------------------------------
K8ESL9_CARML/40-156--------------------------------------------------------------------------------

PF03420

Q6WHE3_BPKVM/5-184--------------------------------------------------------------------------------
PCPP_BPT4/6-190--------------------------------------------------------------------------------

PF04586

Q8XLC1_CLOPE/14-176--------------
Q73HU3_WOLPM/8-161--------------
Q830G5_ENTFA/12-173--------------
Q81Z10_BACAN/15-178--------------
Q81XX9_BACAN/12-175--------------
Q8DXJ7_STRA5/5-163--------------
Q813K0_BACCR/5-168--------------
Q88MK5_PSEPK/15-174--------------
Q6N8L6_RHOPA/13-166--------------
Q8XYS5_RALSO/12-178--------------
Q6NK35_CORDI/146-313--------------
Q2G1W7_STAA8/11-173--------------
Q9CGQ7_LACLA/14-175--------------
Q9CI95_LACLA/13-174--------------
Q9ZXB1_BPPHC/15-176--------------

PF00716

SCAF_VZVD/28-373IVGPYGSPHPPAFP
SCAF_HHV11/37-365FGFPAAAGSVAYGP
SCAF_EBVB9/24-327PLPPFSHQAIATAP
SCAF_EHV2/58-381LRVPPPAAPFPVHP
SCAF_HCMVM/31-414SASPAPLPL.PSY.

PF14550

D4MX42_9FIRM/23-149--------------
Q08QA7_STIAD/309-425--------------
D4LIB0_9FIRM/21-145--------------
B0VGF6_CLOAI/86-209--------------
L0AM66_NATGS/15-132--------------
E3E570_PAEPS/39-161--------------
A8FGQ7_BACP2/40-155--------------
R7DEN0_9FIRM/81-194--------------
N0AUF1_9BACI/41-158--------------
XKDF_BACSU/39-157--------------
C4ZCA6_EUBR3/27-152--------------
YQBD_BACSU/39-156--------------
H1XPV5_9BACT/40-158--------------
D3DZY3_METRM/3-133--------------
A0RNP3_CAMFF/39-157--------------
R6JHS6_9CLOT/36-161--------------
K8ESL9_CARML/40-156--------------

PF03420

Q6WHE3_BPKVM/5-184--------------
PCPP_BPT4/6-190--------------

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (C,A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
Close window