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42  structures 8879  species 5  interactions 15035  sequences 46  architectures

Clan: GatB_YqeY (CL0279)


YqeY-like superfamily Add an annotation

This superfamily includes a domain from GatB as well as one from YqeY. Although being structurally distinct they share a common sequence relationship.

This clan contains 2 families and the total number of domains in the clan is 15035. The clan was built by A Bateman.


This clan contains the following 2 member families:

GatB_Yqey YqeY

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
GatB_Yqey (PF02637) 8346 (55.5%) View
YqeY (PF09424) 6689 (44.5%) View
Total: 2 Total: 15035 Clan alignment

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls


This tree shows the occurrence of the domains in this clan across different species. More...



There are 5 interactions for this clan. More...

Interacting families
Amidase GatB_Yqey
GatB_N GatB_Yqey
GatB_Yqey Amidase
Glu-tRNAGln GatB_Yqey


For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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