Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
226  structures 17219  species 19  interactions 100938  sequences 170  architectures

Clan: AcetylDC-like (CL0332)

Summary

Acetyl-decarboxylase like superfamily Add an annotation

These families are double psi-beta barrel structures.

This clan contains 3 families and the total number of domains in the clan is 100938. The clan was built by P Coggill.

Members

This clan contains the following 3 member families:

Asp_decarbox CDC48_N Molydop_binding

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

Loading domain graphics...

Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Molydop_binding (PF01568) 83143 (82.4%) View
Asp_decarbox (PF02261) 13947 (13.8%) View
CDC48_N (PF02359) 3848 (3.8%) View
Total: 3 Total: 100938 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls

Hide

This tree shows the occurrence of the domains in this clan across different species. More...

Loading...

Interactions

There are 19 interactions for this clan. More...

Interacting families
A B
Asp_decarbox Asp_decarbox
CDC48_2 CDC48_N
CDC48_N AAA
CDC48_2
CDC48_N
UBX
Complex1_49kDa Molydop_binding
Fer4_11 Molydop_binding
Molybdop_Fe4S4 Molydop_binding
Molybdopterin Molydop_binding
Molydop_binding Complex1_49kDa
Fer4_11
Molybdopterin
Molydop_binding
NapB
NrfD_2
Rieske
NapB Molydop_binding
UN_NPL4 CDC48_N

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

Loading structure mapping...