Sequence alignment for CL0343

PF00129

HLAH_HUMAN/25-203------------------------------------------------RSHSMRYFYTTMSRPGAGEPRF----------
ZA2G_HUMAN/26-201------------------------------------------------GRYSLTYIYTGLSKHVEDVPAF----------
HA10_MOUSE/25-203------------------------------------------------GSHSMRYFETSVSRPGLGEPRF----------
HA15_MOUSE/21-199------------------------------------------------SPHSLRYFTTAVSRPGLGEPRF----------
1C01_GORGO/25-203------------------------------------------------GSHSMRYFFTAVAPPGRGEPRF----------
FCGRN_RAT/25-198------------------------------------------------PRLPLMYHLAAVSDLSTGLPSF----------
HA12_MOUSE/25-203------------------------------------------------GSHSLRYFVTAVSRPGFGEPRY----------
HA1F_CHICK/23-198------------------------------------------------ELHTLRYIQTAMTDPGPGQPWF----------
HA17_MOUSE/22-200------------------------------------------------GQHSLQYFHTAVSRPGLGEPWF----------
HA11_RAT/25-203------------------------------------------------GSHSLRYFHTAVSRPGLGEPRF----------
HA1A_BOVIN/22-200------------------------------------------------GSHSLRYFSTAVSRPGLGEPRY----------
HLAG_HUMAN/25-203------------------------------------------------GSHSMRYFSAAVSRPGRGEPRF----------
HA1A_RABIT/25-203------------------------------------------------GSHSMRYFYTSVSRPGLGEPRF----------
HLAE_HUMAN/22-200------------------------------------------------GSHSLKYFHTSVSRPGRGEPRF----------
HA1T_MOUSE/27-205------------------------------------------------GSHSLRYFYTALSRPAISEPWY----------
1C28_PANTR/22-200------------------------------------------------GSHSLRYFSTAVSRPGRGEPRY----------
HA19_CANLF/25-204------------------------------------------------GSHSLRYFYTSVSRPGAGDPRF----------

PF16497

G7NW87_MACFA/1-198------------------------------------------------MGCLLFLLLWALLQAWGSAEVPQRLFPLRCLQ
F6RUT0_HORSE/1-198------------------------------------------------MRCLLFLLLWGLPQIRRTSEVPQRNFPFRCLQ
L7N1C3_MYOLU/1-197------------------------------------------------MECWPVLLLWGLPQMWASPEAPQSSARLLFLQ
F6QYN3_HORSE/1-198------------------------------------------------MLFLQLHLLAVLLPGGDNKDDFQEPVSFQIIQ
CD1D1_MOUSE/1-200------------------------------------------------MRYLPWLLLWAFLQVWGQSEAQQKNYTFRCLQ
F7DC15_HORSE/1-198------------------------------------------------MLFLQLPCLAVLLQGGDNKDDFQEPISFQIIQ
CD1D_SHEEP/1-198------------------------------------------------MGCLLFLVLLEFQKIWGSFEAPQTSFPFRFLQ
I3MFM6_ICTTR/1-196------------------------------------------------MGCMWFLLLWVLPQAWGSSEGR..SVLFRCLQ
G1PVC0_MYOLU/1-198------------------------------------------------MLFLQIPLLAVLLAAGDNEDAFQEEISFKMIH
L7N1K8_MYOLU/1-198------------------------------------------------MLFLQIPLLAVLLAAVDNEDAFQEEISFKIIQ
H0WFT3_OTOGA/1-199------------------------------------------------MRRLLLLQLWALLRVWGGPEGPQRSISFRCLQ
F7BW69_HORSE/1-198------------------------------------------------MLFLQFALLVVLLPGGDSKDDFQEPTSFRVIY
G1QBJ7_MYOLU/1-198------------------------------------------------MLFLQITFLAVLLAAGDNEDAFQEQISFHMIH
M3YN29_MUSPF/1-198------------------------------------------------MLFLQLVLLVVFLPDGDSEDAVQEPISFQITL
F1PZ60_CANLF/1-198------------------------------------------------MLFLQLVLLVVLLPEGDSEDASQEPVSFQVIL
G1L1W7_AILME/2-199------------------------------------------------MLFLQLVSFVVLLPGGDSEDAFQEPISLRIIL
G3HKH3_CRIGR/1-198------------------------------------------------MRYLTCLLLWVFPRVWGQWEDQLKNYPLRCLQ
G1LFS0_AILME/1-198------------------------------------------------MLFLQLALLAVLLPGGDGDDDFQEPIYFRVIR
A0ZPR3_PIG/1-198------------------------------------------------MLFLQLPLLLVLLPGGDSEEGFQEPISFQIIW

PF14586

RAE1C_MOUSE/31-204------------------------------------------------DAHSLRCNLTIKAPTPADPLWY----------

PF00969

DRB3_HUMAN/42-116--------------------------------------------------------------------------------
DRB4_HUMAN/42-116--------------------------------------------------------------------------------
HB2D_CANLF/42-116--------------------------------------------------------------------------------
HB2A_RAT/8-82--------------------------------------------------------------------------------
DOB_HUMAN/39-113--------------------------------------------------------------------------------
DQB2_HUMAN/45-118--------------------------------------------------------------------------------
DPB1_HUMAN/42-114--------------------------------------------------------------------------------
HB2L_CHICK/8-82--------------------------------------------------------------------------------
HB2D_RAT/40-114--------------------------------------------------------------------------------
HB2C_PIG/45-119--------------------------------------------------------------------------------
HB2A_MOUSE/40-114--------------------------------------------------------------------------------
HB21_MOUSE/40-114--------------------------------------------------------------------------------
DMB_HUMAN/27-106--------------------------------------------------------------------------------
O35424_MOUSE/39-113--------------------------------------------------------------------------------
HB2P_RABIT/43-113--------------------------------------------------------------------------------
F1N610_BOVIN/47-117--------------------------------------------------------------------------------
F1NSZ6_CHICK/40-113--------------------------------------------------------------------------------
M3WAZ6_FELCA/46-118--------------------------------------------------------------------------------
M3XET4_FELCA/43-114--------------------------------------------------------------------------------
Q1MTC8_DANRE/29-104--------------------------------------------------------------------------------
Q31099_MOUSE/27-106--------------------------------------------------------------------------------
Q3UUV9_MOUSE/43-114--------------------------------------------------------------------------------
Q58DW7_BOVIN/27-105--------------------------------------------------------------------------------
Q6MGA7_RAT/27-106--------------------------------------------------------------------------------
Q70IB5_BOVIN/44-114--------------------------------------------------------------------------------
W5PC43_SHEEP/40-111--------------------------------------------------------------------------------
W5Q266_SHEEP/32-102--------------------------------------------------------------------------------

PF00993

G3N564_GASAC/36-114--------------------------------------------------------------------------------
G3N551_GASAC/28-106--------------------------------------------------------------------------------
H2L2T1_ORYLA/33-110--------------------------------------------------------------------------------
H2MYR3_ORYLA/32-109--------------------------------------------------------------------------------
M4A196_XIPMA/25-103--------------------------------------------------------------------------------
H2MXB6_ORYLA/22-99--------------------------------------------------------------------------------
M4AFZ0_XIPMA/29-106--------------------------------------------------------------------------------
I3KVG9_ORENI/23-101--------------------------------------------------------------------------------
I3KVH2_ORENI/23-100--------------------------------------------------------------------------------
I3J7S9_ORENI/23-101--------------------------------------------------------------------------------
I3JXB4_ORENI/24-101--------------------------------------------------------------------------------
I3JKK1_ORENI/23-101--------------------------------------------------------------------------------
H2RPE2_TAKRU/21-98--------------------------------------------------------------------------------
H2SD42_TAKRU/22-100--------------------------------------------------------------------------------
H2V674_TAKRU/22-96--------------------------------------------------------------------------------
H3CDM2_TETNG/23-101--------------------------------------------------------------------------------
H3CJ64_TETNG/21-98--------------------------------------------------------------------------------
I3KVG1_ORENI/88-165--------------------------------------------------------------------------------
Q8WM94_DANRE/23-100--------------------------------------------------------------------------------
F1R0K2_DANRE/23-100--------------------------------------------------------------------------------
F1QNN0_DANRE/23-100--------------------------------------------------------------------------------
W5LNP0_ASTMX/25-104--------------------------------------------------------------------------------
W5KCR1_ASTMX/22-100--------------------------------------------------------------------------------
Q1MTC7_DANRE/23-100--------------------------------------------------------------------------------
M9MM93_DANRE/17-99--------------------------------------------------------------------------------
G1L546_AILME/37-114--------------------------------------------------------------------------------
G1PA08_MYOLU/2-81--------------------------------------------------------------------------------
L8Y815_TUPCH/29-108--------------------------------------------------------------------------------
L8Y3F3_TUPCH/29-108--------------------------------------------------------------------------------
L8YBX0_TUPCH/29-108--------------------------------------------------------------------------------
I3M2H3_ICTTR/44-123--------------------------------------------------------------------------------
G5BB02_HETGA/33-112--------------------------------------------------------------------------------
HA2P_RABIT/1-80--------------------------------------------------------------------------------
G3TMW3_LOXAF/41-120--------------------------------------------------------------------------------
H0VMA0_CAVPO/42-122--------------------------------------------------------------------------------
H0UYJ7_CAVPO/26-105--------------------------------------------------------------------------------
G1R500_NOMLE/35-114--------------------------------------------------------------------------------
H0WUA6_OTOGA/41-120--------------------------------------------------------------------------------
H2RBA7_PANTR/29-109--------------------------------------------------------------------------------
W5Q1M3_SHEEP/29-109--------------------------------------------------------------------------------
G7P2R3_MACFA/2-81--------------------------------------------------------------------------------
F7GQ21_MACMU/12-91--------------------------------------------------------------------------------
G3RX38_GORGO/29-109--------------------------------------------------------------------------------
F7I518_CALJA/33-113--------------------------------------------------------------------------------
H0VR34_CAVPO/30-110--------------------------------------------------------------------------------
G5BB12_HETGA/29-109--------------------------------------------------------------------------------
W5Q2C6_SHEEP/29-109--------------------------------------------------------------------------------
M3Y3I6_MUSPF/29-109--------------------------------------------------------------------------------
G1QAF8_MYOLU/29-109--------------------------------------------------------------------------------
G1Q5X0_MYOLU/29-109--------------------------------------------------------------------------------
L7N114_MYOLU/30-110--------------------------------------------------------------------------------
G1PGE2_MYOLU/3-83--------------------------------------------------------------------------------
I3MDX2_ICTTR/29-109--------------------------------------------------------------------------------
L5KYV0_PTEAL/29-109--------------------------------------------------------------------------------
F6YG75_HORSE/29-109--------------------------------------------------------------------------------
F7D2Z8_MONDO/30-110--------------------------------------------------------------------------------
G1P5L8_MYOLU/30-110--------------------------------------------------------------------------------
G1Q9G7_MYOLU/3-83--------------------------------------------------------------------------------
G1QA26_MYOLU/29-109--------------------------------------------------------------------------------
G3UHX0_LOXAF/29-109--------------------------------------------------------------------------------
O97981_PIG/29-109--------------------------------------------------------------------------------
G3HQS4_CRIGR/268-348--------------------------------------------------------------------------------
K7EUP3_PONAB/29-109--------------------------------------------------------------------------------
G1QBV7_MYOLU/2-82--------------------------------------------------------------------------------
I3N7K0_ICTTR/29-108--------------------------------------------------------------------------------
I3MR31_ICTTR/27-107--------------------------------------------------------------------------------
F6T370_MONDO/29-109--------------------------------------------------------------------------------
F1ML44_BOVIN/29-109--------------------------------------------------------------------------------
H0WYE3_OTOGA/29-109--------------------------------------------------------------------------------
HA2B_RAT/30-110--------------------------------------------------------------------------------
HA2B_MOUSE/30-110--------------------------------------------------------------------------------
F6ZJJ9_HORSE/29-109--------------------------------------------------------------------------------
F7D2J1_XENTR/21-100--------------------------------------------------------------------------------
F6ZD60_MONDO/30-109--------------------------------------------------------------------------------
A7X5M6_ORNAN/29-108--------------------------------------------------------------------------------
G3UHG4_LOXAF/2-81--------------------------------------------------------------------------------
G3UJA6_LOXAF/27-104--------------------------------------------------------------------------------
G5C3I9_HETGA/21-100--------------------------------------------------------------------------------
HA22_MOUSE/29-108--------------------------------------------------------------------------------
G1L6J1_AILME/29-108--------------------------------------------------------------------------------
U3IBP5_ANAPL/28-111--------------------------------------------------------------------------------
H2ZTM7_LATCH/28-107--------------------------------------------------------------------------------
H2ZYC5_LATCH/4-83--------------------------------------------------------------------------------
F6S093_HUMAN/8-85--------------------------------------------------------------------------------
G5BB05_HETGA/92-169--------------------------------------------------------------------------------
I3MD72_ICTTR/41-118--------------------------------------------------------------------------------
G3U806_LOXAF/37-114--------------------------------------------------------------------------------
G3HQS6_CRIGR/42-118--------------------------------------------------------------------------------
Q31621_MOUSE/41-118--------------------------------------------------------------------------------
M3XS77_MUSPF/41-118--------------------------------------------------------------------------------
W5PDP1_SHEEP/41-118--------------------------------------------------------------------------------
W5MK71_LEPOC/37-117--------------------------------------------------------------------------------
W5MKC8_LEPOC/20-100--------------------------------------------------------------------------------

PF11624

Q6XK91_MUHV1/51-299TVTRDGFHKRTISVDNGRPVVVWDGGDKDPKICKICPAVNSINTENIFLDIQKMRLNNLLAQGLWDIQRICVRYVCLFL.
Q9DW34_RCMVM/28-282SEWVREYSPRHQLMVNGSHPVLMLTGLKN.RTCHRCPNLQHLDIEYNFFMTQERYLLT.LGDKWEFVARASIVHTCFLL.
Q6XK80_MUHV1/51-299TVTRSGLHKRTISVDNGRPVVVWDVGDKNPKICKICPAVSSINIEYLFLDIQKMRLSNLLAQSLRDTQRICVRYACLFS.
Q1XE02_MUHV1/44-308SENSTDYVARIRSMLTFD.LMTIQDGQIT.MSCNGCPNATELGPELALIANQSTYLQT..VRELVGDGPLELEYTFLLRP
Q6XK65_MUHV1/51-299TVTRSGFHKRTISVNNGRPVVVWDVGDKNPKICKICPAVSSINTEYVFLDIQKMRLSNLLVQGLWETQRICVRYVCLFL.

PF00129

HLAH_HUMAN/25-203-------------------ISVGYVDDTQFVRFDSDDASPREEPRAPWMEREG.PKYWDRNTQICKAQAQTERENLRIAL
ZA2G_HUMAN/26-201-------------------QALGSLNDLQFFRYNSKDR..KSQPMGLWRQVEG.MEDWKQDSQLQKAREDIFMETLKDIV
HA10_MOUSE/25-203-------------------IIVGYVDDTQFVRFDSDAETPRMEPRAPWMEQEG.PEYWERETQRAKGNEQSFHVSLRTLL
HA15_MOUSE/21-199-------------------IIVGYVDDTQFVRFDSDAENPRMEPRARWIEQEG.PEYWERETWKARDMGRNFRVNLRTLL
1C01_GORGO/25-203-------------------IAVGYVDDTQFVRFDSDAANTRGEPRAPWVEQEG.PEYWDRETQKYKRQAQTDRVSLRKLR
FCGRN_RAT/25-198-------------------WATGWLGAQQYLTYNNLRQ..EADPCGAWIWENQVSWYWEKETTDLKSKEQLFLEAIRTLE
HA12_MOUSE/25-203-------------------MEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEG.PEYWERETRRAKGNEQSFRVDLRTAL
HA1F_CHICK/23-198-------------------VTVGYVDGELFVHYNSTAR..RYVPRTEWIAAKADQQYWDGQTQIGQGNEQIDRENLGILQ
HA17_MOUSE/22-200-------------------ISVGYVDDTQFVRFDSDAENPRMEPRARWMEQEG.PEYWERETQIAKGHEQSFRGSLRTAQ
HA11_RAT/25-203-------------------ISVGYVDDTQFVRYDSDAENPRYEPRARWMEREG.PEYWEEQTLVAKGQELDYRVSLRNLL
HA1A_BOVIN/22-200-------------------LEVGYVDDTQFVQFDSDAPNPRMEPRARWVEQEG.PEYWDRNTRNAKGNAQSFRVNLNTLR
HLAG_HUMAN/25-203-------------------IAMGYVDDTQFVRFDSDSACPRMEPRAPWVEQEG.PEYWEEETRNTKAHAQTDRMNLQTLR
HA1A_RABIT/25-203-------------------IIVGYVDDTQFVRFDSDAASPRMEQRAPWMGQVE.PEYWDQQTQIAKDTAQTFRVNLNTAL
HLAE_HUMAN/22-200-------------------ISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEG.SEYWDRETRSARDTAQIFRVNLRTLR
HA1T_MOUSE/27-205-------------------IAVGYLDDTQFVRFNSSGETATYKLSAPWVEQEG.PEYWARETEIVTSNAQFFRENLQTML
1C28_PANTR/22-200-------------------IAVEYVDDTQFLRFDSDAAIPRMEPREPWVEQEG.PQYWERTTGYAKANAQTDRVALRNLL
HA19_CANLF/25-204-------------------IAVGYVDDTQFVRFDSDAATGRMEPRAPWVEQEG.PEYWDRQTRTIKETARTFRVDLDTLR

PF16497

G7NW87_MACFA/1-198ISSFA-------NSNWTRTDGLAWLGELQTHSWSNDSD--TIRSLKPWSQGTFSDQQWEALQRVFRVYRSSFTRDVKEFA
F6RUT0_HORSE/1-198ISSFL-------NRSWARTDALAWLGELQPYVWKNDSD--TIRFLKPWSQGTFSDQQCEELQHLFRVYRSSVTRDIQEFA
L7N1C3_MYOLU/1-197ISPFA-------NSSWTRTDGSFWLGALQTHSWSNGLD--.IHFLRPWSQGKLSDHQWEQLQQVFWVYRSSFNREIREFA
F6QYN3_HORSE/1-198ISSFY-------NGSWVQNLGSGWLDELQTHGWESSSG--TIIFLWPWSKGNYSNEEWMELEKLFRMSSIGIPQMFHNLA
CD1D1_MOUSE/1-200MSSFA-------NRSWSRTDSVVWLGDLQTHRWSNDSA--TISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRDIQELV
F7DC15_HORSE/1-198ISSFY-------NRSWVQNLSSGWLGELQTHSCESKSG--TIIFLWPWSKGNFSNEEIMELEKLFHMFSAGFLQAFHEHA
CD1D_SHEEP/1-198ISSFA-------NHSWTRTDGLMWLGELQPYTWRNESS--TIRFLKHWSQGTFSDQQWEQLQHTFQVYRSSFTRDIREFV
I3MFM6_ICTTR/1-196ISSFT-------NSSWMRTDALAWLGELQTHSWSNASD--TISFVKPWAQGTFSSQQWIHLQNTFRVFRSSFIRDIQEFA
G1PVC0_MYOLU/1-198SSSFY-------NDSWVKIRYSAWLGDLQTHGWDINSG--RIIFLRPWSKGNLGKEEIKELEEFFRAFSIEMPHELHRHA
L7N1K8_MYOLU/1-198SISFY-------NRSWVKSQNSAWLGDLKTHGWDNNSG--RIIFLRPWSKGNLSKKELKELEEYSHKFSTEMPNKFHRHA
H0WFT3_OTOGA/1-199ISSFS-------NSSQVRTDGSAWLGELQTHSWVDSSD--AFRFLKPWSQSGFSDQQWERLQHIFRVYRISFTREVQKFV
F7BW69_HORSE/1-198SSSFY-------NPSRVQALGSAWLGELQTHGWENHTG--SFIFLRPWSKGNFSSEELTEIEKLFRTFSIEFNQIFHNHA
G1QBJ7_MYOLU/1-198ISSFY-------NHSWTQNWGSGWLGELQILGWNSNSY--SVIFLRPWSKGNFSNKEITEMEKFFRRLHIELPPLIRKHA
M3YN29_MUSPF/1-198TVSFY-------NRSWTQSLGSAWLDEIQTHGWDNKTG--AFIFLWPWSKGNWSNVELIKLEKLLYAYFIGLRQVFQDHV
F1PZ60_CANLF/1-198TTSFY-------NSSWTQNLASAWLDELQTHSWDSDSG--TFLFLWPWAKGKLSKEELIERERTFHTFSIRFPLIFQDSV
G1L1W7_AILME/2-199TSSFY-------NRSRTQNLASAWLDELQTHGWDSKTG--AFIFLWPWSRGNLSNEEVIRAEEAFYSNSIGLPLCFHDHF
G3HKH3_CRIGR/1-198ISSFP-------NSSSFRTDGLAWLGDVQTHSWRNAS.--TVSFLKPWSHGKLSDQQWQTLEHILQVYRTSFTRDIQELV
G1LFS0_AILME/1-198TSFLY-------NRSGTQNLGSIWLDELQTHAWDNKTH--TFTFLWPWSQGNLSNEEVVTGENLFYSNTILVNQDFREHV
A0ZPR3_PIG/1-198ISSFY-------NRSWEEEVCSAWLGELQTHRREGKSD--IVIYRQPWSKGNFSREDLMESEHILRMFFVRFVQAFFNHA

PF14586

RAE1C_MOUSE/31-204-------------------EAKCLVDEILILHLSNINK--TMTSGDPGETANA-TEVGECLTQPVNDLCQKLRDKVSNTK

PF00969

DRB3_HUMAN/42-116--------------------------------------------------------------------------------
DRB4_HUMAN/42-116--------------------------------------------------------------------------------
HB2D_CANLF/42-116--------------------------------------------------------------------------------
HB2A_RAT/8-82--------------------------------------------------------------------------------
DOB_HUMAN/39-113--------------------------------------------------------------------------------
DQB2_HUMAN/45-118--------------------------------------------------------------------------------
DPB1_HUMAN/42-114--------------------------------------------------------------------------------
HB2L_CHICK/8-82--------------------------------------------------------------------------------
HB2D_RAT/40-114--------------------------------------------------------------------------------
HB2C_PIG/45-119--------------------------------------------------------------------------------
HB2A_MOUSE/40-114--------------------------------------------------------------------------------
HB21_MOUSE/40-114--------------------------------------------------------------------------------
DMB_HUMAN/27-106--------------------------------------------------------------------------------
O35424_MOUSE/39-113--------------------------------------------------------------------------------
HB2P_RABIT/43-113--------------------------------------------------------------------------------
F1N610_BOVIN/47-117--------------------------------------------------------------------------------
F1NSZ6_CHICK/40-113--------------------------------------------------------------------------------
M3WAZ6_FELCA/46-118--------------------------------------------------------------------------------
M3XET4_FELCA/43-114--------------------------------------------------------------------------------
Q1MTC8_DANRE/29-104--------------------------------------------------------------------------------
Q31099_MOUSE/27-106--------------------------------------------------------------------------------
Q3UUV9_MOUSE/43-114--------------------------------------------------------------------------------
Q58DW7_BOVIN/27-105--------------------------------------------------------------------------------
Q6MGA7_RAT/27-106--------------------------------------------------------------------------------
Q70IB5_BOVIN/44-114--------------------------------------------------------------------------------
W5PC43_SHEEP/40-111--------------------------------------------------------------------------------
W5Q266_SHEEP/32-102--------------------------------------------------------------------------------

PF00993

G3N564_GASAC/36-114--------------------------------------------------------------------------------
G3N551_GASAC/28-106--------------------------------------------------------------------------------
H2L2T1_ORYLA/33-110--------------------------------------------------------------------------------
H2MYR3_ORYLA/32-109--------------------------------------------------------------------------------
M4A196_XIPMA/25-103--------------------------------------------------------------------------------
H2MXB6_ORYLA/22-99--------------------------------------------------------------------------------
M4AFZ0_XIPMA/29-106--------------------------------------------------------------------------------
I3KVG9_ORENI/23-101--------------------------------------------------------------------------------
I3KVH2_ORENI/23-100--------------------------------------------------------------------------------
I3J7S9_ORENI/23-101--------------------------------------------------------------------------------
I3JXB4_ORENI/24-101--------------------------------------------------------------------------------
I3JKK1_ORENI/23-101--------------------------------------------------------------------------------
H2RPE2_TAKRU/21-98--------------------------------------------------------------------------------
H2SD42_TAKRU/22-100--------------------------------------------------------------------------------
H2V674_TAKRU/22-96--------------------------------------------------------------------------------
H3CDM2_TETNG/23-101--------------------------------------------------------------------------------
H3CJ64_TETNG/21-98--------------------------------------------------------------------------------
I3KVG1_ORENI/88-165--------------------------------------------------------------------------------
Q8WM94_DANRE/23-100--------------------------------------------------------------------------------
F1R0K2_DANRE/23-100--------------------------------------------------------------------------------
F1QNN0_DANRE/23-100--------------------------------------------------------------------------------
W5LNP0_ASTMX/25-104--------------------------------------------------------------------------------
W5KCR1_ASTMX/22-100--------------------------------------------------------------------------------
Q1MTC7_DANRE/23-100--------------------------------------------------------------------------------
M9MM93_DANRE/17-99--------------------------------------------------------------------------------
G1L546_AILME/37-114--------------------------------------------------------------------------------
G1PA08_MYOLU/2-81--------------------------------------------------------------------------------
L8Y815_TUPCH/29-108--------------------------------------------------------------------------------
L8Y3F3_TUPCH/29-108--------------------------------------------------------------------------------
L8YBX0_TUPCH/29-108--------------------------------------------------------------------------------
I3M2H3_ICTTR/44-123--------------------------------------------------------------------------------
G5BB02_HETGA/33-112--------------------------------------------------------------------------------
HA2P_RABIT/1-80--------------------------------------------------------------------------------
G3TMW3_LOXAF/41-120--------------------------------------------------------------------------------
H0VMA0_CAVPO/42-122--------------------------------------------------------------------------------
H0UYJ7_CAVPO/26-105--------------------------------------------------------------------------------
G1R500_NOMLE/35-114--------------------------------------------------------------------------------
H0WUA6_OTOGA/41-120--------------------------------------------------------------------------------
H2RBA7_PANTR/29-109--------------------------------------------------------------------------------
W5Q1M3_SHEEP/29-109--------------------------------------------------------------------------------
G7P2R3_MACFA/2-81--------------------------------------------------------------------------------
F7GQ21_MACMU/12-91--------------------------------------------------------------------------------
G3RX38_GORGO/29-109--------------------------------------------------------------------------------
F7I518_CALJA/33-113--------------------------------------------------------------------------------
H0VR34_CAVPO/30-110--------------------------------------------------------------------------------
G5BB12_HETGA/29-109--------------------------------------------------------------------------------
W5Q2C6_SHEEP/29-109--------------------------------------------------------------------------------
M3Y3I6_MUSPF/29-109--------------------------------------------------------------------------------
G1QAF8_MYOLU/29-109--------------------------------------------------------------------------------
G1Q5X0_MYOLU/29-109--------------------------------------------------------------------------------
L7N114_MYOLU/30-110--------------------------------------------------------------------------------
G1PGE2_MYOLU/3-83--------------------------------------------------------------------------------
I3MDX2_ICTTR/29-109--------------------------------------------------------------------------------
L5KYV0_PTEAL/29-109--------------------------------------------------------------------------------
F6YG75_HORSE/29-109--------------------------------------------------------------------------------
F7D2Z8_MONDO/30-110--------------------------------------------------------------------------------
G1P5L8_MYOLU/30-110--------------------------------------------------------------------------------
G1Q9G7_MYOLU/3-83--------------------------------------------------------------------------------
G1QA26_MYOLU/29-109--------------------------------------------------------------------------------
G3UHX0_LOXAF/29-109--------------------------------------------------------------------------------
O97981_PIG/29-109--------------------------------------------------------------------------------
G3HQS4_CRIGR/268-348--------------------------------------------------------------------------------
K7EUP3_PONAB/29-109--------------------------------------------------------------------------------
G1QBV7_MYOLU/2-82--------------------------------------------------------------------------------
I3N7K0_ICTTR/29-108--------------------------------------------------------------------------------
I3MR31_ICTTR/27-107--------------------------------------------------------------------------------
F6T370_MONDO/29-109--------------------------------------------------------------------------------
F1ML44_BOVIN/29-109--------------------------------------------------------------------------------
H0WYE3_OTOGA/29-109--------------------------------------------------------------------------------
HA2B_RAT/30-110--------------------------------------------------------------------------------
HA2B_MOUSE/30-110--------------------------------------------------------------------------------
F6ZJJ9_HORSE/29-109--------------------------------------------------------------------------------
F7D2J1_XENTR/21-100--------------------------------------------------------------------------------
F6ZD60_MONDO/30-109--------------------------------------------------------------------------------
A7X5M6_ORNAN/29-108--------------------------------------------------------------------------------
G3UHG4_LOXAF/2-81--------------------------------------------------------------------------------
G3UJA6_LOXAF/27-104--------------------------------------------------------------------------------
G5C3I9_HETGA/21-100--------------------------------------------------------------------------------
HA22_MOUSE/29-108--------------------------------------------------------------------------------
G1L6J1_AILME/29-108--------------------------------------------------------------------------------
U3IBP5_ANAPL/28-111--------------------------------------------------------------------------------
H2ZTM7_LATCH/28-107--------------------------------------------------------------------------------
H2ZYC5_LATCH/4-83--------------------------------------------------------------------------------
F6S093_HUMAN/8-85--------------------------------------------------------------------------------
G5BB05_HETGA/92-169--------------------------------------------------------------------------------
I3MD72_ICTTR/41-118--------------------------------------------------------------------------------
G3U806_LOXAF/37-114--------------------------------------------------------------------------------
G3HQS6_CRIGR/42-118--------------------------------------------------------------------------------
Q31621_MOUSE/41-118--------------------------------------------------------------------------------
M3XS77_MUSPF/41-118--------------------------------------------------------------------------------
W5PDP1_SHEEP/41-118--------------------------------------------------------------------------------
W5MK71_LEPOC/37-117--------------------------------------------------------------------------------
W5MKC8_LEPOC/20-100--------------------------------------------------------------------------------

PF11624

Q6XK91_MUHV1/51-299.GFDV.......VCDVYHTTDRVRAAYTRQTGKIDIQGSGTFSTSDAKGIGTYMIESNVREIKNKWRPTVQKLKQLGYMN
Q9DW34_RCMVM/28-282.KSDF.......VCDTEVVTNRGHLTIHRSNNTVFGHGNFMHLLDSMNVPGLQYLIENREAIRIRWREQLYVMKKYAQPS
Q6XK80_MUHV1/51-299.RFNV.......LCDVYHTTDTVRVTYTYQTGKINIQGSGSFPTSDAKEFGTYMLRNRVQEIKNTWRSTVQKLKQLGYMN
Q1XE02_MUHV1/44-308NKSDYYIGLWSDTCRLYYTSIKNRTTTYGEPKPNNCSLNDT.LWDAGNARRLRELLDRADDIRERWNATCLWNVRSAKLS
Q6XK65_MUHV1/51-299.GFNV.......LCDVYHTTDTVRVAYIHQTRKINIQGSGTFPISDAKEFAIFMLTSNVQEIKKTWRPTVQQLKQLGYMN

PF00129

HLAH_HUMAN/25-203RYYNQSEGGSHTMQVMYGCDVGP----DGPFLRGYE-QHAYDGKDYIA---------LNEDLRSWTAADMA-----AQ-I
ZA2G_HUMAN/26-201EYYNDS.NGSHVLQGRFGCEIEN----NR.SSGAFW-KYYYDGKDYIE---------FNKEIPAWVPFDPA-----AQ-I
HA10_MOUSE/25-203GYYNQSESGSHTIQWMYGCKVGS----DGRFLRGYL-QYAYDGRDYIA---------LNEDLKTWTAADVA-----AI-I
HA15_MOUSE/21-199GYYNQSNDESHTLQWMYGCDVGP----DGRLLRGYC-QEAYDGQDYIS---------LNEDLRSWTANDIA-----SQ-I
1C01_GORGO/25-203GYYNQSEDGSHTFQRMYGCDVGP----DGRLQRGYD-QLAYDGKDYIA---------LNEDLRSWTAADTA-----AQ-I
FCGRN_RAT/25-198NQIN....GTFTLQGLLGCELAP----DN.SSLPTA-VFALNGEEFMR---------FNPRTGNWSGEWPE-----TD-I
HA12_MOUSE/25-203RYYNQSAGGSHTLQWMAGCDVES----DGRLLRGYW-QFAYDGCDYIA---------LNEDLKTWTAADMA-----AQ-I
HA1F_CHICK/23-198RRYNQT.GGSHTVQWMYGCDILE----GG.PIRGYY-QMAYDGRDFTA---------FDKGTMTFTAAVPE-----AV-P
HA17_MOUSE/22-200SYYNQSKGGSHTLQWMYGCDMGS----DGRLLRGYL-QFAYEGRDYIA---------LNEDLKTWTAVDMA-----AQ-I
HA11_RAT/25-203SYYNQSEGGSHTIQRMYGCDVGS----DGSLLRGYE-QHAYDGRDYIA---------LNEDLKTWAVADFA-----AW-I
HA1A_BOVIN/22-200GYYNQSEAGSHTLQWMSGCDVGP----DGALRRGFM-QYGYDGRDYLA---------LNEDLRSWTAGETE-----AQ-I
HLAG_HUMAN/25-203GYYNQSEASSHTLQWMIGCDLGS----DGRLLRGYE-QYAYDGKDYLA---------LNEDLRSWTAADTA-----AQ-I
HA1A_RABIT/25-203RYYNQSAAGSHTFQTMFGCEVWA----DGRFFHGYR-QYAYDGADYIA---------LNEDLRSWTAADTA-----AQ-N
HLAE_HUMAN/22-200GYYNQSEAGSHTLQWMHGCELGP----DRRFLRGYE-QFAYDGKDYLT---------LNEDLRSWTAVDTA-----AQ-I
HA1T_MOUSE/27-205DYYNLSQNGSHTIQVMYGCEVEF----FGSLFRAYE-QHGYDGPDYIA---------LNEDLKTWTAADTA-----AE-I
1C28_PANTR/22-200RRYNQSEAGSHTLQGMNGCDMGP----DGRLLRGYH-QHAYDGKDYIS---------LNEDLRSWTAADTV-----AQ-I
HA19_CANLF/25-204GYYNQSEAGSHTRQTMYGCDLGP----DGRLLRGYS-QDAYDGADYIA---------LNEDLRSWTAADTA-----AQ-I

PF16497

G7NW87_MACFA/1-198KML..RLAYPMELQVSAGCEVHP----.GNASHNFF-HVAFQGSDILS---------FQGT--SWEPAQEAP--LWVN-L
F6RUT0_HORSE/1-198KML..HIAYPLEVQVSAGCEVHP----.GNTSESFL-YAAFQGRDILS---------FQGT--SWVPAPDTP--QWVA-R
L7N1C3_MYOLU/1-197KML..HLDYPFVVQVSAGCEVHP----.GSPLKSFF-HSAFQGSDILS---------FQET--SWVPAPDAP--HGTE-M
F6QYN3_HORSE/1-198SQW..QLEYPFEVQITAGCELHF----.GEISVGFM-RGAYQGSDFMS---------FQNN--SWLPSPDGG--SRAQ-H
CD1D1_MOUSE/1-200KMMSPKEDYPIEIQLSAGCEMYP----.GNASESFL-HVAFQGKYVVR---------FWGT--SWQTVPGAP--SWLD-L
F7DC15_HORSE/1-198SQW..QLEYPFQVQTAGGCELHF----.GKASISFM-RVAYQGSDFLS---------FQNN--SWLPSPKGG--NRAQ-H
CD1D_SHEEP/1-198KML..PGDYPFEIQISGGCELLP----.RNISESFL-RAALQEKDVLS---------FQGM--SWVSAPDAP--PWSQ-V
I3MFM6_ICTTR/1-196KML..SLEYPTELQLSGGCEVHP----.GNDSEHFL-HVAHQGEHILS---------FQGT--AWEPAPQAP--QWVD-L
G1PVC0_MYOLU/1-198SEW..KFKYPFEIQIRMGCELHP----.GGAIVDFY-GFAYQGSELLH---------FQNN--SWLPSPKGG--TRAQ-D
L7N1K8_MYOLU/1-198NQW..QLKYPFEIQITRGCELHP----.GGPTVAFY-RYAYQGSEVMH---------FQNN--SWLPSPKGG--TRAQ-D
H0WFT3_OTOGA/1-199KKL..QVAYPVEIQLSAGCEVRP----GNASSANFL-HVAFQGSDFLS---------FQGT--SWEPAPQVP--DWGN-W
F7BW69_HORSE/1-198SQW..QLAYPFQVQLAMGCELHI----.GEASVGFA-RIAYQGSDLIS---------IQNN--SWLPSPKGG--SRAQ-Q
G1QBJ7_MYOLU/1-198SEW..KFEYPFEVQMTGGCELHP----.REGKVVFL-QYAYQGSELLT---------FQNN--SWLPSSKGG--TRAQ-E
M3YN29_MUSPF/1-198RHW..HLEYPFQIQLAEGCELHF----.GEASVGFV-KFAYQGADLTS---------FQNT--TWWPSPKGG--SRAQ-E
F1PZ60_CANLF/1-198SDW..QLEYPFQVQMAEGCGLYF----.GKPSVGFM-QIAYQGSDLVS---------FQNK--SWWPSPKGG--RRAQ-Q
G1L1W7_AILME/2-199SEW..QLEYPFQVQLTGGCELHF----.GEPSVGFI-RIAYEGSDLVS---------FQNM--SWWPSPEGG--SRAQ-Q
G3HKH3_CRIGR/1-198KML.PIIHYPIEMQVSAGCEVHS----.GNTSENFF-NVASQGQHILS---------FQGT--SFQKAPDAP--PWTE-L
G1LFS0_AILME/1-198SKW..QLEYPFQLQMVIGCELHV----.GKPSVGFM-RIAYQGSDLIS---------FQNV--SWWPSPKGG--SRAQ-Q
A0ZPR3_PIG/1-198SQW..KLEYPFDVQIAGGCDLYH----.GETSVGFV-RIAYQGSDFAS---------FQKN--SWLPSPKGG--TRAQ-L

PF14586

RAE1C_MOUSE/31-204VDTHKTNGYPH-LQVTMIYPQSQ-----GQTPSATW-EFNISDSYFFT---------FYTENMSWRSANDE-----SG-V

PF00969

DRB3_HUMAN/42-116----------------SECHF.F----NGTERVRYLDRYFHNQEEFLR---------FDSDVGEYRAVTELG.....R-P
DRB4_HUMAN/42-116----------------CECHF.L----NGTERVWNLIRYIYNQEEYAR---------YNSDLGEYQAVTELG.....R-P
HB2D_CANLF/42-116----------------SECYF.T----NGTERVRFVERYIHNREEFVR---------FDSDVGEFRAVTELG.....R-P
HB2A_RAT/8-82----------------GLCYY.T----NGTQRIRSVDRRFYNQEEFLR---------YDSDVGEFRALTELG.....R-S
DOB_HUMAN/39-113----------------ADCYF.T----NGTEKVQFVVRFIFNLEEYVR---------FDSDVGMFVALTKLG.....Q-P
DQB2_HUMAN/45-118----------------GMCYF.T----NGTERVRGVARYIYNREEYGR---------FDSDVGEFQAVTELG.....R-.
DPB1_HUMAN/42-114----------------QECYA.F----NGTQRF..LERYIYNREEFAR---------FDSDVGEFRAVTELG.....R-P
HB2L_CHICK/8-82----------------VECHF.L----NGTERVRFLVRHVYNRQQYVH---------FDSDVGLFVADTVLG.....E-P
HB2D_RAT/40-114----------------GECHF.Y----NGTQRVRFLARYIYNREEYTR---------FDSDVGEFRAVTELG.....R-P
HB2C_PIG/45-119----------------GECYF.Y----NGTQRVRGVARYIYNQEEHLR---------FDSDVGEFRAVTPLG.....R-P
HB2A_MOUSE/40-114----------------GECYF.T----NGTQRIRYVTRYIYNREEYVR---------YDSDVGEHRAVTELG.....R-P
HB21_MOUSE/40-114----------------SECHF.Y----NGTQRVRLLERYFYNLEENLR---------FDSDVGEFHAVTELG.....R-P
DMB_HUMAN/27-106----------------STCLLDD----AGTPKD.FTYCISFNKDLLTC---------WDPEENKMAPCEFGVLNSLAN-V
O35424_MOUSE/39-113----------------ADCYF.T----NGTEKVHLLVRFIFNLEEYLH---------FDSDLGMFVALTELG.....E-P
HB2P_RABIT/43-113----------------YECYA.S----NGTQRL..LDRCAYNREEFVR---------FDSDIGEFRAVSELG.....R-Q
F1N610_BOVIN/47-117----------------..CYF.T----NGTERVRYVTRYIYNQEEYVR---------FDSDWDEYRALTPLG.....R-P
F1NSZ6_CHICK/40-113----------------.ECHY.L----NGTERVRYLVRYVYNRQEYAH---------FDSDVGKHVADTPLG.....E-P
M3WAZ6_FELCA/46-118----------------.ECHF.T----NGTERVRYLERHYHNGEENLR---------FDSEVGEYRAVTELG.....R-P
M3XET4_FELCA/43-114----------------.ECHY.P----NGTERVRYLVRFFYNREELAR---------FDNEVGEFRAVSELG.....R-P
Q1MTC8_DANRE/29-104----------------QQCFYST----SDYSDMVYLASYSFNKVVDTQ---------FNSSVGKFVGYTEQG.....L-I
Q31099_MOUSE/27-106----------------STCVLND----AGTPQD.FTYCVSFNKDLLAC---------WDPDVGKIVPCEFGVLSRLAE-I
Q3UUV9_MOUSE/43-114----------------.ECHY.F----NGKERVWSVTRFIYNQEEFAR---------FNSDFGKFLAVTELG.....R-P
Q58DW7_BOVIN/27-105----------------STCVLDD----DGDPKD.FSYCISFNKDLLTC---------WDPLQASMIPREFGVLNGLAR-Y
Q6MGA7_RAT/27-106----------------STCLLDD----EGTPMD.FTYCISFNKDLLAC---------WDPEEGQIVPCEYGVLFKLAE-F
Q70IB5_BOVIN/44-114----------------.MCYF.T----NGTEHVRLVARQIYNKEEILH---------FDSDLGEFVAVTELG.....R-V
W5PC43_SHEEP/40-111----------------.DCYF.T----NGTEKVRFVVRFIFNLEEYAR---------FDSDLGMFVALTELG.....K-P
W5Q266_SHEEP/32-102----------------.ECRF.S----NGLQRMRFFARYIYNTKEDVH---------FDSDVGEFTALTELG.....R-P

PF00993

G3N564_GASAC/36-114-----------KDIRVLGCS.........DSDGENMFGLDGEEVWYAD---------FKHGKGVRPLPSFVD--.PIE.F
G3N551_GASAC/28-106-----------KDIAIVGCS.........DSDGEEMYGLDGEEVWYAD---------FKHGKGVRPQPSFVD--.PID.Y
H2L2T1_ORYLA/33-110-----------EDFGILGCS.........DYDQEYMYALDGEEKWYAD---------YKKETGVGPQLPLGG--.HFI.N
H2MYR3_ORYLA/32-109-----------EDFQITGCS.........DYDEEFMVNLDGEEIVYTD---------FKKGTEVDAQPSFVG--.HIT.Y
M4A196_XIPMA/25-103-----------EDLAIVGCS.........DSDGEMMYALDGEELWYAD---------FKKGKGVDPQPPFVV--.HTS.Y
H2MXB6_ORYLA/22-99-----------EDLAITGCS.........DSDGEDMYALDGEEVWYAD---------FKKQTGVEPQPPFVD--.HVS.Y
M4AFZ0_XIPMA/29-106-----------DSFRVIGCS.........DTDGLDMMTLDGEEVWHAD---------FIHETGVDTLPDFVS--.HPS.F
I3KVG9_ORENI/23-101-----------SDIAINGCS.........DSDGEFMYGLDGEEKWYAD---------FNKHTGVDAPPDFIG--.SFN.Y
I3KVH2_ORENI/23-100-----------SDIAIGGCS.........ESDGENMYGLDGEEIAYAD---------FNKQEFIYPQPPFID--.PIT.V
I3J7S9_ORENI/23-101-----------SDIAVGGCS.........ESDEENMYGLDGEELAYTD---------FNKKEEIYPLPPFID--.PIT.Y
I3JXB4_ORENI/24-101-----------GDVHINGCS.........DFDAEDMYGLDGEEVAYAD---------FNNHTEVYILPPFAE--.PMI.Y
I3JKK1_ORENI/23-101-----------TDIHVIGCS.........DFNGEVMFGLDREELWYAD---------FEKQMGVSPQPSFID--.PIS.F
H2RPE2_TAKRU/21-98-----------KDIRITGCS.........DLDGEDMFGLDSEELWYAD---------FSKGEGVDGTPPFID--.PVR.F
H2SD42_TAKRU/22-100-----------EDIRILGCS.........DLDGEFMYGLDSEEVWYAD---------FSKGEGVDINPPFID--.PIT.Y
H2V674_TAKRU/22-96-----------KDIGIVGCS.........DLDGEFMYGLDSEELWYAD---------FSKGEGVYGTPPFID--.PFR..
H3CDM2_TETNG/23-101-----------EDVHIRGCS.........DFDGEDMYGLDGEERWYAD---------FKRGEGVYALPDFVD--.PLK.F
H3CJ64_TETNG/21-98-----------EDIRIVGCS.........DFDGEYMHGLDGEELWYAD---------FRRGEGVYAQPDFID--.PIK.Y
I3KVG1_ORENI/88-165-----------EDIGIVGCS.........DSDGEDMYGLDGEEVRYAD---------FKKQEDINSLPPFAD--.LIT..
Q8WM94_DANRE/23-100-----------EDFAIRGCS.........DTEKEDTYGMDEEELWHAD---------FNQKKGVETLPDFGD--.PMT.F
F1R0K2_DANRE/23-100-----------EELEIYVCS.........DSESEAMVGADGEELWHAD---------FKQKTGIITLPDFAD--.RIG.F
F1QNN0_DANRE/23-100-----------EVNQIQVCS.........NTEQEFFIGYDGEEIWHAD---------IAHRRGVKTTPSFAQ--YAVI..
W5LNP0_ASTMX/25-104-----------EYYVFDWCS.........ETDGGVVWMIDGEEEYHAD---------FKDGRGVVSLPKFAT--LNYT.I
W5KCR1_ASTMX/22-100-----------KDIFLTICS.........ETFGEQIYGLDGEEKWHAD---------FNLQEGVMTLPQFAD--.PAS.Y
Q1MTC7_DANRE/23-100-----------KDFGFVGCS.........DMEKEFLFGFDGEELFHLD---------FIRKEGVATAPDFAD--.PLS.F
M9MM93_DANRE/17-99-----------KDYHKYGLIGAC....GDADQEDFIVQFDDEQLAHVD---------FKEQKDVITLPEFAG--......
G1L546_AILME/37-114-----------PRVSV..CLVVQ....THRPSGEYMFEFDGDEQFYVD---------LDK.ETVWQLPEFIH--.AFD.F
G1PA08_MYOLU/2-81-----------DHVSTY.AEFVQ....THSPSGEYMFQFDGDEQFYVD---------LDKKETVWRLPEFIH--.TFD.Y
L8Y815_TUPCH/29-108-----------DHVSTY.LTFTQ....THRPSGEFMFQFDGDEMFYVD---------QDKRETIWSLEEFGR--.VYS.Y
L8Y3F3_TUPCH/29-108-----------DHVSTY.LAFTQ....THRPSGEYMSQLDGDEVFYVD---------QDKRETIWSLEEFGH--.AFS.F
L8YBX0_TUPCH/29-108-----------DHVSIY.LMFAQ....TQRPSGEYMFQIDGDEQFYVD---------QDKKETIWSLEEFGR--.AFS.F
I3M2H3_ICTTR/44-123-----------DHVISF.AMFAQ....TNAPTGEFMYEFDEDEMFYVD---------RDKKETIWQLSEFGR--.GLS.F
G5BB02_HETGA/33-112-----------DHVSTY.AIFAQ....THSPSGEYMFEFDEDEQFYVD---------LDKKETIWHLPEFGR--.AFS.F
HA2P_RABIT/1-80-----------EHVSVF.VIFAQ....THEPSGECMFEFDEDEVFHVD---------LDKKQAIWYLPEFGR--.MFS.V
G3TMW3_LOXAF/41-120-----------DHVSTF.AMFTQ....THVPSGEYMFEFDEDEMFSVN---------LDKKETVWHLPEFGK--.AIY.F
H0VMA0_CAVPO/42-122-----------DHVSTY.AEFVQ....RSRPSGEFIFDIDEDEMFYVD---------LDSRQTVWRLLEFGQ--.ALSPL
H0UYJ7_CAVPO/26-105-----------DHVSRY.AEFVQ....TQTPSGEYMFELDEDEQFYVD---------LDKRQTVWRLPEFGQ--.AFA.F
G1R500_NOMLE/35-114-----------DHVSTY.AAFVQ....THRPTGEFMFEFDEDEQFYVD---------LDKKETVWHLEEFGR--.AFS.F
H0WUA6_OTOGA/41-120-----------DHVSTY.FEFVQ....THRPSGEYMFEFDEDEMFYVD---------LDKKETVWHLPLFAQ--.AFS.F
H2RBA7_PANTR/29-109-----------DHVASYGVNFYQ....SHGPSGQYTHEFDGDEEFYVD---------LETKETVWQLPMFSK--.FIS.F
W5Q1M3_SHEEP/29-109-----------DHIAAYGINVYH....SYGPSGYYTHEFDGDEEFYVD---------LEKRETVWHLPVFSQ--.FRS.F
G7P2R3_MACFA/2-81-----------DHVASYGVNLYQ....SYGFSGQYSHEFDGDEQFYVD---------LERKETVWRLPVLSQ--.F.S.F
F7GQ21_MACMU/12-91-----------DHLASYGVNFYQ....SYGLSGQYSHEFDGDEQFYVD---------LGRKETVWRLPIPYR--.Y.G.F
G3RX38_GORGO/29-109-----------DHVASCGVNLYQ....SYGPSGQFTHEFDGDEQFYVD---------LERKETAWRWPEFSK--.FGG.F
F7I518_CALJA/33-113-----------DHVASYGVNLYQ....SYGPSGQFTHEFDGDEEFYVD---------LGKKETVWRLPVFST--.FTS.F
H0VR34_CAVPO/30-110-----------DHVAAYGINVYQ....SYGSSGYYTHEFDGDELYYVD---------LEKRQTVFWMPGLKK--.VVG.F
G5BB12_HETGA/29-109-----------DHVASYGVNVYQ....SYGPSGQYTHEFDGDEQFYVD---------LKKKETIFWLPGLNK--.VAG.F
W5Q2C6_SHEEP/29-109-----------DHVGSYGISIYQ....SYGPSGQYTHEFDGDEQFYVD---------LEKKETVWQLPLFSR--.MLS.F
M3Y3I6_MUSPF/29-109-----------DHAASYGINVYQ....SYGPSAQYTHEFDGDEEFYVD---------LEKKETVWQLPMFQT--.LGS.F
G1QAF8_MYOLU/29-109-----------DHIAAYGVCFSQ....SYSPSGQYTHEFDGDEEFYVD---------LEKRETVWQLPMFSE--.VRG.F
G1Q5X0_MYOLU/29-109-----------DHVGAYGIHVYQ....SYGPSGQYTHEFDGDEEFYVD---------LDKEETVWRLPMFSE--.VTN.F
L7N114_MYOLU/30-110-----------DHVRAYGINVYP....YYGSSGQYTHESDGDEEFYVD---------LDKKETVWQLPMFSE--.FRN.F
G1PGE2_MYOLU/3-83-----------DHVGAYGINVYQ....SYGPSGQYTHEFDGDEEFYVD---------LDKKETVCWLLGFSE--.FKY.F
I3MDX2_ICTTR/29-109-----------DHVANYGINLYQ....SYGPSGQYTHEFDGDEEFYVD---------LQKKQTVWTLPIFSQ--.MRK.F
L5KYV0_PTEAL/29-109-----------DHVASYGINVYQ....SYGPSGQYTHEFDGDEEFYVN---------LEKQETVWRLPEFGE--.FTS.F
F6YG75_HORSE/29-109-----------DHFASYGTVIYE....SYGDFGQYTHEFDGDEEFHVD---------LEKKETVWRLPEFGE--.FAT.F
F7D2Z8_MONDO/30-110-----------DHVGTYGTTMAQ....SYGPSGQYTMECDEDEIFYVD---------QQKKETVWRLPEFSH--.FAG.Y
G1P5L8_MYOLU/30-110-----------DHVGNFGPCFSQ....SYGSSGQYTFEFDGEEIFYVD---------QNKRETVWRLPGLSE--.FGG.F
G1Q9G7_MYOLU/3-83-----------DHIIACGISVSQ....SYGPSGQYTFEFDGDEIFYVD---------PKKKKTVWRLPGLSE--.FGG.F
G1QA26_MYOLU/29-109-----------DHVAAYGASFYQ....SYGPSGQYTFEFDGDEMFYVD---------LEKKETVWRLPGLSE--.FGG.F
G3UHX0_LOXAF/29-109-----------DHVGCYGTTIYQ....SYGPGGQYTQEFDGDELFYVN---------LEKKETVWRLPMFSK--.FAG.F
O97981_PIG/29-109-----------DHMGSYGPAFYQ....SYDGSGQFTYDFDGEQLFSVD---------LKKREAVWRLPEFSN--.FAD.F
G3HQS4_CRIGR/268-348-----------DHMGSYGPAFYQ....SYDASGQFTHEFDGEQIFSVD---------LKNGEVVWRLPEFGD--.TQY.S
K7EUP3_PONAB/29-109-----------DHVGSYGPAFYQ....SYGASGQFTHEFDGEQLFSVD---------LKKSEAVWRLPEFGD--.FAR.F
G1QBV7_MYOLU/2-82-----------DHVGTYGTNVYQ....TYGASGQFTYEFDGDELFYVD---------LKTRETVWRLPEFSN--.FTK.F
I3N7K0_ICTTR/29-108-----------DHVGTYGTNIYQ....TYGDYGQFTYEFDKDELFYLD---------MGKKETVWRQPEFSN--.FIT.I
I3MR31_ICTTR/27-107-----------DHVGTYGRNIYQ....TYGDYGQFTYEFDGDELFYVD---------LEKKETVWRQPEFSN--.FAT.F
F6T370_MONDO/29-109-----------DHVGTFGTTVYH....SYGPSGQNTNDFDEDELFYVD---------LKKKETVWRKSEFCN--.FAK.F
F1ML44_BOVIN/29-109-----------DHVGSYGTEIYQ....SHGPSGQYTQEFDGDELFYVD---------LGKKETVWRLPMFSQ--.FAG.F
H0WYE3_OTOGA/29-109-----------DHVGIYGLNVYQ....SYGSSGQYTQEFDGDEMFYVD---------LERKETVWRLPEFST--.FAG.F
HA2B_RAT/30-110-----------DHVGSYGITVYQ....YHESKGQYTHEFDGDERFYVD---------LDKKETIWRIPEFGQ--.LIS.F
HA2B_MOUSE/30-110-----------DHVGTYGISVYQ....SPGDIGQYTFEFDGDELFYVD---------LDKKETVWMLPEFGQ--.LAS.F
F6ZJJ9_HORSE/29-109-----------DHIGSYGITMYE....SSGPSGQYNFEFDGDETFYVD---------LEKKETIWRLPEFSK--.FSS.F
F7D2J1_XENTR/21-100-----------DYF.DYSALFYQ....TRRPTGEYLFDYNGNELFHVD---------LDSKSVVWTLPGLSE--.HES.F
F6ZD60_MONDO/30-109-----------NHVIIQ.AEFAQ....TSNPEGEFMFDFDGDEIFHVD---------MDKRETVWRLTDFSN--.FAS.F
A7X5M6_ORNAN/29-108-----------EHRIIQ.AEFSQ....THSPTGEFMFEFDGDEIFHVD---------LDRKETVWRLADFSN--.YAS.F
G3UHG4_LOXAF/2-81-----------EHVTTH.TELYL....SPNQSGEFMLDFDGDEIFHVN---------MEKKETAWWLKGFEC--.FAS.F
G3UJA6_LOXAF/27-104-----------EHVTIQ.AEFYL......SPSAEFMLDFDGDEFFYVN---------MEQKETVWWLKEFEH--.FAS.F
G5C3I9_HETGA/21-100-----------EHKIIQ.AEFYL....SPDETGEFMFDFDGDEIFHVD---------VKKEQTVWRLEEFGR--.YAS.F
HA22_MOUSE/29-108-----------EHTIIQ.AEFYL....LPDKRGEFMFDFDGDEIFHVD---------IEKSETIWRLEEFAK--.FAS.F
G1L6J1_AILME/29-108-----------DHVIIQ.AEFYM....TPDPSGEYMFDFDGDEIFHVD---------LEKKETVWRLEEFGR--.FAS.F
U3IBP5_ANAPL/28-111-----------GHVLMQ.TEFYQRDETRNKEGGQFMFDFDGDEIFHVD---------LEKSETIWRLPIFTT--.FTS.F
H2ZTM7_LATCH/28-107-----------EHTLFQ.IDFCQ....TGHPNGDYNFLFDEDEAFSVD---------LEEKEAVWRLPQFKD--.LTR.Y
H2ZYC5_LATCH/4-83-----------EHTLSQ.TGFCQ....TGHPNGDYNFMLDNEEAFSVD---------LEEKETVWRLPQFKD--.LAQ.V
F6S093_HUMAN/8-85-----------NHTFLH.TVYCQ....DGSPSVGLSEAYDEDQLFFFD---------FSQNTRVPRLPEFAD--WAQE..
G5BB05_HETGA/92-169-----------NHTFRH.TVFCQ....EGTPSIGLSESYDEDLLFSFD---------FSKNTRVPRLPDFAD--WAQD..
I3MD72_ICTTR/41-118-----------NHTFRH.TVFCQ....DGSPSIGLTETYDEDLLFSFD---------FSRNTRVPRLPEFAD--WAQD..
G3U806_LOXAF/37-114-----------NHTFLH.TMYCQ....NGTPSLGLSEAYDEDQLFSFD---------FSQNSRVPRLPEFAD--WAKD..
G3HQS6_CRIGR/42-118-----------NHTFRH.TVFCQ....DGNPSIGLSESYDEDQLF.YD---------FSQNTRVPRLPDFAD--WAQE..
Q31621_MOUSE/41-118-----------NHTFRH.TLFCQ....DGIPNIGLSETYDEDELFSFD---------FSQNTRVPRLPDFAE--WAQG..
M3XS77_MUSPF/41-118-----------NHTFQH.TMYCQ....NWNPSIGLSEAYDGDQLFSFD---------FSQNTRVPRLPEFAD--WAQK..
W5PDP1_SHEEP/41-118-----------NHTLLH.TVYCQ....DWSPSVGLSEAYDGDQLFSFD---------FSQNIRVPRLPEFAD--WAHQ..
W5MK71_LEPOC/37-117-----------TYEVAYFCQ.......SENRKGSRNEVFDDDEMFHID---------PDRKVDEPRLPEFEK--.WAW.N
W5MKC8_LEPOC/20-100-----------IDINVIGCK.......SDDPVAQDEAQLDGDEMFYAD---------FDKKEMILTLPAFAD--.SFG.V

PF11624

Q6XK91_MUHV1/51-299ETEVEFWYNT...TGLTTCVVTS----RSNVPFTVELSLNTNSSAIVT.....EESTVDCQTVTVKAPGSHAQRCYVT--
Q9DW34_RCMVM/28-282HVWVTLIRDSL..RNFVGCSAYC----SSPFPIAVSLASKTGQTVYGK.....EYWSFISVNASVQSNDLNLKYCRIE--
Q6XK80_MUHV1/51-299ATEVEFWYNT...TGLTTCVVTS----RSNVPFTVELSLNTNSSAIVT.....EESTVDCQIVTVKAPGSHAQRCYVT--
Q1XE02_MUHV1/44-308RLEIEFWYEMEDGQNLTKCAVKS----QGRRRMRIAITDECDNIGFARGQLNYTEGGFYLEAVTKSAPGL...LCTLQ--
Q6XK65_MUHV1/51-299VTEVEFWYNT...TGLTTCVVTS----RSNAPFTVELSLNTNSSAIVT.....DESTVDYQTVTLKVSDSYPQRCYVT--

PF00129

HLAH_HUMAN/25-203TKRKWEAARRAEQ.RRVYLEGEFVEWLRRYLENGKETL---
ZA2G_HUMAN/26-201TKQKWEAEPVYVQRAKAYLEEECPATLRKYLKYSKNIL---
HA10_MOUSE/25-203TRRKWEQAGAAEY.YRAYLEAECVEWLLRYLELGKETL---
HA15_MOUSE/21-199SKHKSEAVDEAHQ.QRAYLQGPCVEWLHRYLRLGNETL---
1C01_GORGO/25-203TQRKWEAARWAER.QRAYLEGLCVEWLRRYLENGKETL---
FCGRN_RAT/25-198VGNLWMKQPEAARKESEFLLTSCPERLLGHLERGRQNL---
HA12_MOUSE/25-203TRRKWEQAGAAER.DRAYLEGECVEWLRRYLKNGNATL---
HA1F_CHICK/23-198TKRKWEEESEPER.WKNYLEETCVEWLRRYVEYGKAEL---
HA17_MOUSE/22-200TRRKWEQAGIAEK.DQAYLEGTCMQSLRRYLQLGKETL---
HA11_RAT/25-203TRSKWQRNGAAER.SRAYLEGTCVEWLLRYLERGKETL---
HA1A_BOVIN/22-200TKRKWEAAGYAEV.QRNYLEGECVEWLRRYLENGKDTL---
HLAG_HUMAN/25-203SKRKCEAANVAEQ.RRAYLEGTCVEWLHRYLENGKEML---
HA1A_RABIT/25-203TQRKWEAAGEAER.HRAYLERECVEWLRRYLEMGKETL---
HLAE_HUMAN/22-200SEQKSNDASEAEH.QRAYLEDTCVEWLHKYLEKGKETL---
HA1T_MOUSE/27-205TRSKWEQAGYTEL.RRTYLEGPCKDSLLRYLENRKKTQ---
1C28_PANTR/22-200TQRFYEAEEYAEE.FRTYLEGECLELLRRYLENGKETL---
HA19_CANLF/25-204TQRKWEAAGVAELQWRNYLETTCVEWLRRYLEMGKETL---

PF16497

G7NW87_MACFA/1-198AIQVLNQDKWTKETVQWLLNDTCPQFVSGLLESGKSE----
F6RUT0_HORSE/1-198VIEVLNDDQGTREMVQSLLNDTCPQFVRGLLETGKSE----
L7N1C3_MYOLU/1-197ISNVLNKDQYIKDTLEWLLNDICPQLVTGLLEAGQQD----
F6QYN3_HORSE/1-198ACELYNGDKVGLEITDRFLSDTCPRLLLSLLDAGKAD----
CD1D1_MOUSE/1-200PIKVLNADQGTSATVQMLLNDTCPLFVRGLLEAGKSD----
F7DC15_HORSE/1-198VCQLFNWDQITLEIIQRLLSDTCPRFLLGLLDAGKSD----
CD1D_SHEEP/1-198VCKVLNEDQGTKETVHWLLHDICPELVKGLMQTGKSE----
I3MFM6_ICTTR/1-196VIKVLNQNQGTKETVQWLLNDICPQFVNGLLETGKSE----
G1PVC0_MYOLU/1-198MCRRFNQYLVVKNVVQRILSDTCPRFLLSIPEAGKAD----
L7N1K8_MYOLU/1-198MCKLYNQYVVITNIVQRILSDTCPRFLLSILDAGKAD----
H0WFT3_OTOGA/1-199VIGELNKDQGTRETVQWLLSDICPQLAGALLEAGASE----
F7BW69_HORSE/1-198VSGRFNLNKVFLETWHRLLTDTCPRFLLGLLDAGKAD----
G1QBJ7_MYOLU/1-198VCRLFNQRHVVNIIIQRLLRDTCPRFLLGLFDAGKAD----
M3YN29_MUSPF/1-198VCKRFNQYHVLNEEIHTFFSDTCPKFLLGLLDAGKAD----
F1PZ60_CANLF/1-198VCKLLNQYHVVNLRIHSHISDFCPHYLLGLLDAGKAD----
G1L1W7_AILME/2-199VCRLFNQDHEDNELMHKLITDHCPRYLSSLLDAGKAD----
G3HKH3_CRIGR/1-198AIKVLNTDQGTRETIQQLLNDTCPQVLYGLLEAGKAE----
G1LFS0_AILME/1-198VCRLFNQYHEDNELIQALIIDYCPRYLSSLLDAGKAD----
A0ZPR3_PIG/1-198VCKLFNLYQGTLEIIHKLLSDTCPRFVLGLLDAGKAD----

PF14586

RAE1C_MOUSE/31-204IMNKWNDDGDLVQRLKYFIPE-CRQKIDEFLKQSKEK----

PF00969

DRB3_HUMAN/42-116VAESWNSQKDLLEQKRGRVDNYCRHNYGVGE----------
DRB4_HUMAN/42-116DAEYWNSQKDLLERRRAEVDTYCRYNYGVVE----------
HB2D_CANLF/42-116VAESWNGQKEILEQERATVDTYCRHNYGVIE----------
HB2A_RAT/8-82WADDWNSQKEILEQKRAEMDTVCRYNYEETE----------
DOB_HUMAN/39-113DAEQWNSRLDLLERSRQAVDGVCRHNYRLGA----------
DQB2_HUMAN/45-118SIEDWNNYKDFLEQERAAVDKVCRHNYEAEL----------
DPB1_HUMAN/42-114AAEYWNSQKDILEEKRAVPDRMCRHNYELGG----------
HB2L_CHICK/8-82SAKLFNSQPDVLEKNRAAVEMLCNYNYEIVA----------
HB2D_RAT/40-114SAEYYNKQKEYMEQLRATVDTACKHDYEISE----------
HB2C_PIG/45-119EADSWNSQKDVLEQMRAEVDRVCKHNYQIEE----------
HB2A_MOUSE/40-114DAEYWNSQPEILERTRAELDTVCRHNYEGPE----------
HB21_MOUSE/40-114DAENWNSQPEFLEQKRAEVDTVCRHNYEISD----------
DMB_HUMAN/27-106LSQHLNQKDTLMQRLRNGLQNCATHTQPFWG----------
O35424_MOUSE/39-113DADQWNKRLDLLETSRAAVNMVCRQKYKLGA----------
HB2P_RABIT/43-113VAESWN..LEYLQQARAEVDRVCRHNYELFQ----------
F1N610_BOVIN/47-117AAEYWNSQKDILEQTRAEADTVCRHNYQA..----------
F1NSZ6_CHICK/40-113QAEYWNSNAEILENRMNEVDTYCRHNYGVVE----------
M3WAZ6_FELCA/46-118DAKYWNGLKDYMEETRTAVDWFCRHNYGVF.----------
M3XET4_FELCA/43-114DAKYWNGQKDFMERKHAEVDTVCRHNYGV..----------
Q1MTC8_DANRE/29-104FAENFNKDQAYLHQLKAQVDTFCRHNAQIWD----------
Q31099_MOUSE/27-106ISNILNEQESLIHRLQNGLQDCATHTQPFWD----------
Q3UUV9_MOUSE/43-114IVEYLNTQKDMLDNYRASVDR.CRNNYDLV.----------
Q58DW7_BOVIN/27-105LSQFLNNNSYLIQRLSNGLQNCAAHTQPFW.----------
Q6MGA7_RAT/27-106ISNILNKEEGLIQRLKNGLQDCSTHTQPFWN----------
Q70IB5_BOVIN/44-114CAEIWNTQKDLLAEFRAYVDTLCRHNYK...----------
W5PC43_SHEEP/40-111DAELWNNRPDILARSRASVDMLCRRNYKL..----------
W5Q266_SHEEP/32-102DAEYWNQQKDFMEQMRAKVDTVCRSNYQ...----------

PF00993

G3N564_GASAC/36-114PGGAYEQAVTDLQI........CRSNLKTHVKGLKDVPLE-
G3N551_GASAC/28-106REGTYETAVGNQQI........CRNNLKIDLKAFKDFPLE-
H2L2T1_ORYLA/33-110PDG.YQFAKVYEQV........CRRNLKALKKTTKGLQLE-
H2MYR3_ORYLA/32-109.AGGYGATVLELQG........CRNDLEVIRRFTKDLPLK-
M4A196_XIPMA/25-103REGVYEQAVANQQV........CRSNLKVCRSAMKDIPDE-
H2MXB6_ORYLA/22-99.PGGYEQAVANQQI........CRSNLKISRIAMKDLPLE-
M4AFZ0_XIPMA/29-106.SGLYEQSVGQQQL........CKNNLKIIRTGLKDIPDP-
I3KVG9_ORENI/23-101QEGAYENAVANQQI........CRANLKVDSKGMKDFPLE-
I3KVH2_ORENI/23-100.PGGYESSVAFQHS........CRENMKLFGKGMKDYPPE-
I3J7S9_ORENI/23-101GEDAYESSVAFQKT........CRKNMKQFGEGMKDFPPE-
I3JXB4_ORENI/24-101.PGAYKQAVTELKV........CRHNLKALRAVMKDYPSN-
I3JKK1_ORENI/23-101GAGAYKTAVSNLNT........CRQNLQITREGIKDFPPL-
H2RPE2_TAKRU/21-98.EGFYSTAVTNLQI........CKSNMDVVRKGNKDMPPE-
H2SD42_TAKRU/22-100EEGAYSSAVADLQT........CKTSLDITRKSLKDMPPE-
H2V674_TAKRU/22-96..P.TAAAVADLQT........CKYNLDVDRKGNKDMPTE-
H3CDM2_TETNG/23-101PEGTYSQAVADQQI........CKINLGISRKGNKDMPRE-
H3CJ64_TETNG/21-98.EGFYSTAVAVLQI........CKFNLGIFRKGYKDMPRE-
I3KVG1_ORENI/88-165CPGCYEQAVANQQV........CKQNLQTLRKMMKDYPLE-
Q8WM94_DANRE/23-100.PGFYEGSEGEMAV........CKSNLALRIKGFKSPPPE-
F1R0K2_DANRE/23-100.PGFYEISVDSIAG........CRRNLANNIRGFKSPPPA-
F1QNN0_DANRE/23-100.PDIYERALAFLDF........CKYDLHAYIKYFNNPPPE-
W5LNP0_ASTMX/25-104IPAAYEHSIQELQI........CRYNLKYSVFWYNFPAED-
W5KCR1_ASTMX/22-100GEGAYEGALSQVEN........CKSNLGIIKKVYNNPAEP-
Q1MTC7_DANRE/23-100.PGFYEAGVAQMEV........CKQNLATDIRAYNSPQEQ-
M9MM93_DANRE/17-99.....QAVLPPIYVDAKRAEFNCKAYLAVLREVYASSPEV-
G1L546_AILME/37-114DA...WRRVADIVT........ARKDLNILIQGSNHTRAT-
G1PA08_MYOLU/2-81DA...RRGIADIVM........ARKNLDTLIQRSNHTRAT-
L8Y815_TUPCH/29-108EV...QGGLQNLAV........AKGNLNTLMQCSNHTQAS-
L8Y3F3_TUPCH/29-108DA...QGALQNFAV........VKSYLNVLTQRSNHTQAS-
L8YBX0_TUPCH/29-108EA...QGGLQNIAI........VKGNLNIMMQRSNHTPAS-
I3M2H3_ICTTR/44-123DS...QGGLTNIAI........AKSNLDIMTENSNHTQAA-
G5BB02_HETGA/33-112DA...QGGLTNIAI........ANSNLNILIKRTNRTQAP-
HA2P_RABIT/1-80EA...QGGLANIAA........AKSNLNACIQHSNHTQAP-
G3TMW3_LOXAF/41-120DA...EAGLSYMAR........MESNLKYGIQHLNYTQAT-
H0VMA0_CAVPO/42-122DA...QAALTNIAI........LRNNLNIMIQRSNHTQAP-
H0UYJ7_CAVPO/26-105DA...QGGLANIAI........MRTNLNFAIQDSNHTQAP-
G1R500_NOMLE/35-114EA...QGGLANIAI........LNNNLNIMIQRSNHTQAA-
H0WUA6_OTOGA/41-120EA...QGGLANIAI........MKDNLNIMIRHSNHSQDT-
H2RBA7_PANTR/29-109DP...QSALRNMAV........GKHTLEFMIKQSNSTAAT-
W5Q1M3_SHEEP/29-109DP...QGALRNMAS........GKQTLEIMIQRSNSTAAT-
G7P2R3_MACFA/2-81DA...QFALTNIAV........GKQNLNYLMKQSNSTAAT-
F7GQ21_MACMU/12-91DP...QFALRNIAV........LTHNLNVLIKRSNSTAAT-
G3RX38_GORGO/29-109DP...QGALRNMAV........AKHNLNIMIKRYNSTAAT-
F7I518_CALJA/33-113DP...QGALTNIAT........MKPGLDILIKRSNCTAAT-
H0VR34_CAVPO/30-110DP...QGALNNIAI........VKNNLNILTKQSNSTAAT-
G5BB12_HETGA/29-109DP...QGALNNIAI........GKHNLDIITQHSNSTAAT-
W5Q2C6_SHEEP/29-109DP...QGALRNIAV........MKLHVDFLTKFSNSTAAT-
M3Y3I6_MUSPF/29-109DP...QGALRNLAV........SKQNLNILTKRSNYTAAT-
G1QAF8_MYOLU/29-109DP...QSGLTTVAT........ARYNLDLLIKSSNSTAAI-
G1Q5X0_MYOLU/29-109DP...QAGLREVAT........ARYNLDLLIRRSNSTAAI-
L7N114_MYOLU/30-110DP...QVALRNMAI........ANYTLGILIKSSNSTAAP-
G1PGE2_MYOLU/3-83DI...QTALINMAI........FKYNLDLLIKRSNYTAAP-
I3MDX2_ICTTR/29-109DP...QRALQNINI........LRHNLDILIKCSNSSEAP-
L5KYV0_PTEAL/29-109DP...QGALRNIAI........GKHNLDIMIKRSNSTAAP-
F6YG75_HORSE/29-109DP...QGGLRNVAT........AKHNLDIWIKRSNSTAAT-
F7D2Z8_MONDO/30-110DP...QGGLRNIDV........MEHNLDILIKRSNRTRAI-
G1P5L8_MYOLU/30-110DP...QGGLRNIAT........MNHNLDIMIKHSNYTAAI-
G1Q9G7_MYOLU/3-83DP...QSGLRNMAV........VNHTLDILIKSSNSTAAP-
G1QA26_MYOLU/29-109DP...QGGLRNMAT........AEYNLDILIKRSNSTAAI-
G3UHX0_LOXAF/29-109DP...QGGLRNIAV........LKHNLDILIKLSNSTAAT-
O97981_PIG/29-109DP...QNGLRGIAL........IRAHLDVLVERSNHTRAT-
G3HQS4_CRIGR/268-348NF...QSGLASIAM........IRAHLDILVERSNRTRAI-
K7EUP3_PONAB/29-109DP...QGGLAGIAA........IKAHLDILVERSNRSRAI-
G1QBV7_MYOLU/2-82ET...QNALQNIVV........AKRNLDTLIKDSNFTPAT-
I3N7K0_ICTTR/29-108EL...Q.ALRNLVV........VKNILDILIKNSNFTPAT-
I3MR31_ICTTR/27-107EI...Q.GLRNLVV.......VKKKNLDTLIKDSNFTPAT-
F6T370_MONDO/29-109DP...QGGLRNFAM........MKNILDLLLRESNYTAAT-
F1ML44_BOVIN/29-109DP...QAALSEIAT........AKHNLDVLTKRSNFTPVI-
H0WYE3_OTOGA/29-109DP...QGGLREIAT........AKHNMETLTKRSNSTAAP-
HA2B_RAT/30-110DP...QGALRNIAI........IKHNLEILMKRSNSTPAV-
HA2B_MOUSE/30-110DP...QGGLQNIAV........VKHNLGVLTKRSNSTPAT-
F6ZJJ9_HORSE/29-109DP...QGALETIAI........IKEHLDVMMKRSNSTPAT-
F7D2J1_XENTR/21-100DP...QGALQDINV........ARYNLDIGIKRSNSTAAT-
F6ZD60_MONDO/30-109EA...QGALANLAV........DKANLEIMMKRSNNTPDT-
A7X5M6_ORNAN/29-108EA...QGGLANLAV........DKANMDILIKRSNHTPAT-
G3UHG4_LOXAF/2-81EA...QSALANIAV........DKANLDVMMKCFNCTPNI-
G3UJA6_LOXAF/27-104EA...QRVLASIAV........DKVNLDVVMKRSNHTPNI-
G5C3I9_HETGA/21-100EA...QGALANLAV........DKANLGIITKRSNNTPDA-
HA22_MOUSE/29-108EA...QGALANIAV........DKANLDVMKERSNNTPDA-
G1L6J1_AILME/29-108EA...QGALANIAV........DKANLDIMIKRSNHTPNT-
U3IBP5_ANAPL/28-111EA...QGALQNIAV........DKQNMEIMMKRSNRSQGT-
H2ZTM7_LATCH/28-107EV...EVAVANMRT........CESNLDIIIKTANESLTD-
H2ZYC5_LATCH/4-83QA...ARALENMQV........CKTNLDIIKKAVNKTLAD-
F6S093_HUMAN/8-85.....QGDAPAILF........DKEFCEWMIQQIGPKLDG-
G5BB05_HETGA/92-169.....QSDAPAIAF........DKQFCEMMVQQLDPVLDG-
I3MD72_ICTTR/41-118.....QRDASAIVF........DKGFCEAMIEKIGPQLEG-
G3U806_LOXAF/37-114.....QGDVSAISF........DKEFCQSMIQDIGPQFDG-
G3HQS6_CRIGR/42-118.....QGDASAISF........DKEFCNMLIQEIGPQLEG-
Q31621_MOUSE/41-118.....QGDASAIAF........DKSFCEMLMREVSPKLEG-
M3XS77_MUSPF/41-118.....PGDTSTIFF........DKTFCQSMIQEIGPHLEG-
W5PDP1_SHEEP/41-118.....HGDTSNIMF........DKGFCRTMIEEIGPQLEG-
W5MK71_LEPOC/37-117DSSLIQGALANLGI........CENHLKGVMKAIPDEPAV-
W5MKC8_LEPOC/20-100DPGWVQGAIANRQI........CINNLEVAIKAENNPPEN-

PF11624

Q6XK91_MUHV1/51-299SSLGWKGVVT..PPSQYRTK......RAPVN.ISSSKWTGI
Q9DW34_RCMVM/28-282SIVGWSVAVTHIPEGYWTMRLLEHDRRQELN..SWMDETLI
Q6XK80_MUHV1/51-299SSLGWKGVVT..PPSQYRTK......RVPVN.ISSSKWTGI
Q1XE02_MUHV1/44-308TT..WLGSVRNATSGRVRRKSVEGYPRCLLNRRARSQPSSV
Q6XK65_MUHV1/51-299SSLGWKGVVT..PPSQYRTK......RTPVN.ISSSKRTGI

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (C,A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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