Sequence alignment for CL0354

PF09023

SSPC_STAA8/1-107MYQLQFINLVYDTTKLTHLEQTNINLFIGNWSN--------------HQLQKSICIRHGDDTSHNQY---------HILF

PF09022

Q2G2R7_STAA8/1-105MEQIELFSIDKFKCN--SEAKYYLNIIEGEWHP--------------QDLNDSPLKFILSTSDDSDY---------ICKY
Q5HKF5_STAEQ/1-105MHNYNNINIVSDDSK--YQEICWFHTLEGIWHP--------------VEVETSPLNITFNKEITPNY---------VCTL

PF02974

B9JDQ6_AGRRK/142-236--------------------.PTTASLSGGWQV.............RQPDGKAMCDVTLTSETDKDG.TPKMSPGEDCPA
L0ET75_LIBCB/134-225--------------------ELSKGSLPGSWKV...............SSGMVRCDMYLTLTNLGSG...LRGGTRNCYG
D7A619_STAND/144-240--------------------.IRPADLAGAWDL.............AETAGTPICRVELTDQPAGSD.TFKLTLGNVCAA
B9JCF7_AGRRK/88-179--------------------DVTKESMVGSWKV...............SNGGSSCDMFLTLTNLGSG...SRGGTRGCAG
A8G881_SERP5/7-101--------------------LPSAQSLAGQWQV...............ADAQQQCQIEFLASEQSATNGYPLIDRQNCLK
B2IIP2_BEII9/58-161--------------------SPELAALGGQWDL.......VREGATTRPNERQTCRLTLSLRPMADQ.GLLLLLPSSCRK
INH_PHOLL/31-125--------------------LPHASELKGVWQL...............SDKHQQCDVLLTDHPLPEGSIWSLNGDNDCLA
A8HSQ4_AZOC5/216-311--------------------LVRPEEIIGDWNL.............ARVAGTPICRWTFLETPVPGG..FSVTAAPGCDG
D3UWD0_XENBS/7-99--------------------LPEPAELKGLWQL...............SDGNQVCSIELTDTRLPEGSIWALKGDS.CLT
Q6G1L8_BARHE/87-178--------------------DLFPASIAGVWNL...............SMGGKVCRIATPQTKFGQG...YRAGPLHCPG
D7A6A1_STAND/101-194--------------------..ARTQLAGTWKY.............GWDNGQKSCKVTLSTDRGMSG..FAANADVDCPN
A7IJ58_XANP2/96-191--------------------SPAQGQLSGAWTF.............AWDDGRNSCPLRLSTDRGLSG..LSAQADVSCPS
F2IVD7_POLGS/89-181--------------------EIGRNDMLGGWKL...............ASGADNCMLFMTLTTWTGG...YRANTRGCSD
W6RKX8_9RHIZ/82-170--------------------DVTKESMVGSWRV..................NGSCDMFLTLTNLGSG...SRGGTRGCVG
Q4KBR9_PSEF5/33-125--------------------LADPSELVGHWQL............QQAAAPAEGCTLDLLHNA.......ALGDGADCLS
B8ENL7_METSB/40-136--------------------LDNPDAVLGQWDL.............TLEGSNKACRLTFRAERVRGG..FYLGMPAGCRR
OMP19_BRUA2/86-177--------------------DLTPGAVAGVWNA...............SLGGQSCKIATPQTKYGQG...YRAGPLRCPG
A8GE90_SERP5/35-130--------------------LLAPSALKGHWQL............NDAEGKAAACEVELSDELIEGTNAYRFTASAQCLQ
Q6NCK6_RHOPA/26-120--------------------..MKKDMVGQWEL.............ATTERSKTCVVTLTSEPAAKG..LKLTLEPDCAK
C5B0G7_METEA/96-186--------------------..GRSSVVGSWNA...............TDAAGSCKVSLSSTPSLDL...YKASAAGCSN
OMP19_AGRT5/89-180--------------------DVTKESMVGNWRV...............SNGGANCDMFLTLTNLGSG...SRGGTRGCSG
A7ICM0_XANP2/55-153--------------------EIKVEEVVGEWDL.............ARQAGTPVCRVTLLDQPAGNGRGKALAIASGCDP
Q6D3G0_PECAS/7-101--------------------LPSASELSGAWQL...............RGGEQHCEVVLHNTQLVDN.IWRLDGDAQCLK
Q11CW1_CHESB/87-178--------------------PIEKNSLLGSWTV...............NSGGSSCQMFLTLTKYGNS...SRGGTRGCSN
Q3SVU0_NITWN/46-140--------------------...KKNMIGQWEL.............STTERSRTCVVTLKGETAPQG..LKLDLEPGCVA
INH_PSESM/31-124--------------------LPNPAELSGQWRL............SLQGKADDACELQLNTEAP......QLTGDVACAA
G8PR93_PSEUV/107-201--------------------.VKADDMVGKWTV.............YLNSGDRVCQLNLSTEPKDEG...FAASFNHCMD
INH_PSEAE/30-128--------------------LLSASDLAGQWTL.............QQDEAPAICHLELRDSEVAEASGYDLGGDTACLT
A8HUE1_AZOC5/101-195--------------------.GAKEALSGAWTL.............AWDSGQHTCPVQLTTDRGMNG..LSARADVSCPS
B9JTT1_AGRVS/79-170--------------------DFTKEQMVGNWRV...............ANGQSSCDMFLTLTNLGGG...SRGGTRGCVG
OMP19_RHILO/88-179--------------------DLSAAAVAGVWNA...............SVSGQSCKIATPQTKFGAG...FRAGPLHCPA
INH_PSEBN/30-133--------------------LAEPSQLAGQWQAVLSSPQDNAQTQAMQDKPSNSCLVELKVDQ.......TLGGQTDCLG
Q2K9N4_RHIEC/132-229--------------------LPTFRSLAGTWAM.............QRPGGEKLCSVTLDGTLDTDG.HAPLSLSADCAA
B1LU92_METRJ/105-195--------------------...RSAVVGSWDA..............RDATGANCKVTLSSTPALDL...YRATASGCAN
E0SC34_DICD3/24-118--------------------LPSAAELSGQWVL...............SGAEQHCDIRL.NTDVLDGTTWKLAGDSVCLQ

PF09023

SSPC_STAA8/1-107IDTAHQRIKFSS-IDNEEIIYILDYDDTQHILMQTSSKQGI-----GTSRPIVYER

PF09022

Q2G2R7_STAA8/1-105INTEHKQLTLYN-KNNSSIVIEIFIPNDNKILLTIMNTEAL-----GTSPRMTFIK
Q5HKF5_STAEQ/1-105INEDSRKIILSN-VDNPNIIIEMILINSKKLVFNAISKEGL-----GTSPKITFTK

PF02974

B9JDQ6_AGRRK/142-236NI.ADLKLSLWA.MEGFGLV.LMGGDGSSL.SFDMQPDGSFKTSDEEEGEPMLL..
L0ET75_LIBCB/134-225K...LSLMGYWD.VVGHQLV.LKDRNGNTIVSLNKVADNRFEGV.TKDNQPVSVSR
D7A619_STAND/144-240SV.IALAPDRWR.LDGGDLW.LLTAKGEGL.RFARQEDGGWEKVPPGDGEPLMLTR
B9JCF7_AGRRK/88-179E...LTAMGSWA.VSGKQVL.LKDRDGNQIGSLYKTADSRYDGS.TASGQPISLSR
A8G881_SERP5/7-101KV.LTAEVVGWR.PAPDGIA.LLQADGSTLAFFSRDGDV.YRNQPGADGGLTL..K
B2IIP2_BEII9/58-161TMPIVASINAWQPMTRHRID.FTDRNGATLMTFFSTADGRFEAV.GPDAENYAL..
INH_PHOLL/31-125YM.FGEVPAGWR.PTPDGLT.ITDEQGSGLAFFAHEPDG.WFARF.ADGRELMIK.
A8HSQ4_AZOC5/216-311L..GGFVPKAWH.LEGGNVV.VTAATGNGLVRFARQEDGGWAKV.PERGRPLLMMR
D3UWD0_XENBS/7-99EL.MGNPVEGWR.PTPDGIT.LTDDDGNSLAFFGHESEQ.WVAYL.VDGRELVM..
Q6G1L8_BARHE/87-178I...FSQVNSWT.VKGKRLY.FYNNSGRIVVTLYSSNVDRFEGY.TLDGYPVVLSR
D7A6A1_STAND/101-194D...IFMTKGWD.VWGNEIV.LQNHLGKVTARLQPAGSGQYDGVATGDGGKVTLTR
A7IJ58_XANP2/96-191E...IFMTKGWD.MMGSDIV.LQNHQGKITARLQPSGPNHYVGLISESNQKVSLSR
F2IVD7_POLGS/89-181P..ALAGISAWD.LNGKLVV.LKGAAGDQVAQLYASGGDRFSGQ.TATGRAISFSR
W6RKX8_9RHIZ/82-170E...LTAMGSWE.VTGKQVI.LKDRSGNQIGSVYKTADNAFSGQ.TNTGQAISLSR
Q4KBR9_PSEF5/33-125KW.LGEAAVGWF.PEPDGIA.ITGREGSKIIFFSRQKEGLYEARLKADG.LIVLQR
B8ENL7_METSB/40-136GLAPLANAAAWSLPGGEHLI.IGDVVGAPILDFALQPDGALAAI.SPAGENYKL..
OMP19_BRUA2/86-177E...LANLASWA.VNGKQLV.LYDANGGTVASLYSSGQGRFDGQ.TTGGQAVTLSR
A8GE90_SERP5/35-130PLALAELPVAWR.PTPDGMT.LTNADGSMVAFLALTAPKRYEVIN.HHGKP.....
Q6NCK6_RHOPA/26-120TLPFTKAIVAWD.VKGLDIVRLETADGDSVIDFTEVESGIFEGH..RDGEGIYIL.
C5B0G7_METEA/96-186K..DLAKVSAWD.FRDGEVY.LYQPGGTVTARL.RQAGGGLEGALSKSGAQLSMAR
OMP19_AGRT5/89-180E...LTAMGSWE.VSGKMVL.FKNRSGDTIGRVYKSADARFDGT.TNSGQPLSLSR
A7ICM0_XANP2/55-153AL.LRFGPVAWD.IEGGNIL.VRGDTDTAVIRFARQEDGGWART.PERGRPLLMNR
Q6D3G0_PECAS/7-101AL.LSDVPAGWR.PTPDGIT.LTKEQGQSVAFFSKEKEG.YTLIL.PDGSTRTLHK
Q11CW1_CHESB/87-178E...LANMRAWD.LSGNQVV.MYDESGNTVARLYSSGGGRLDGT.TTGGTPVSVSR
Q3SVU0_NITWN/46-140SLPFTKDIAAWT.VAGLDIVRLQTATGESVIDFTEVESGILEGR..RENDGIYILQ
INH_PSESM/31-124KW.LHEPPAGWF.PTPDGLA.LTDNQGNRLIHLNRMDEQTYEARL.PGGELLILGR
G8PR93_PSEUV/107-201G..DLFFVSNWR.MKGQELV.LFDNFSRAKGSMRMTEWNRWEGQLASNSKPITIAR
INH_PSEAE/30-128RW.LPSEPRAWR.PTPAGIA.LLERGGLTLMLLGRQGEGDYRVQK.GDGGQLVLRR
A8HUE1_AZOC5/101-195E...IFMTKGWD.MMGSDIV.LQDHLGKVTARLQPAGPNAFIGTLVENNQAIALNR
B9JTT1_AGRVS/79-170P...LTTMGAWD.VANKQLM.LKDRDGNVIGTLYKTADNRFNGS.TSAGQPVSLSR
OMP19_RHILO/88-179P...IDGIKSWN.VAGKQLT.LYDENGGSLARLYSSGGSKFDGQ.TSNGQPISLTR
INH_PSEBN/30-133QW.LGDEPVRWF.TEPDGLS.LIGKQDSRTHLGLRQGDH.YQMTL.KSGLILRLER
Q2K9N4_RHIEC/132-229NV.ARLKLAVWN.IDGFGLT.LMSHDGSSL.SFDMRADGNFDKSREEGGKPLSLVR
B1LU92_METRJ/105-195K..DLARVSAWD.FRDGEVY.LYQPGGSVAARL.RQGGGGLEGALTKSGAALALNR
E0SC34_DICD3/24-118KL.LPEAPVGWR.PTPDGLT.LTQADGSAVAFFSRNRDR.YEHKL.VDGSVRTLKK

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (C,A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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