Sequence alignment for CL0428

PF13103

A1W9I9_ACISJ/236-319-----------SGSYGGKVAAKVRP....NI.VY...P..DT.....ISGNPRAEVEVRAAP.DGT.I.V.G-ARITQSS
C5CPZ7_VARPS/220-305-----------SSGYAGRIAAAVRP....NI.TF...P..DAE..TV.NGNPAAEFEVNLAP.DGT.I.V.G-VKLTKSS
B2U7H2_RALPJ/254-338-----------SAGYAERVRAKVKP....NI.LF...D..PS....AVNGNPSAVVSVQMAP.DGS.I.L.S-KRLTKSS
Q129I5_POLSJ/209-292-----------SAGYAGKVRARVLP....NV.VF...T..ED.....IAGNPTAEVEVRSTP.DGV.I.L.G-QRLVKSS
D1AZT9_SULD5/170-253-----------YDPFIGKVQEILEE....N...W..QKTVDT......ENGNVAKVIIKVSN.QGV.F...S-YKIVSLS
Q31H80_THICR/253-339-----------RETYISSIAASVKD....N...W...RTAAK.....VSEKAECVVSITQTP.KGM.ISSVK-VEKCNKF
C6WZ34_METML/176-263-----------VDEFKAKIQAKIRN....NV.IK...S..SC.....GDGNPEVRFEITLLP.TGE.LGA.A-PKLTKSS
D0J2W4_COMT2/200-283-----------SAGYAAKVAARVKP....NI.VY...P..DA.....VSGNPRAEVRVRTAP.DGT.I.T.S-ATISKSS
C7LX38_DESBD/237-319-----------DQYYATQVIRAIRQ....N...W.RFP.RLS......NVVLATTVELKVNK.AGD.I.L.S-SRMLNGS
A0L4V1_MAGSM/245-331-----------IRKWQGALREATYK....A...W.RPP..FG....VDISSMKCLATVKITV.DGR.L.S.L-ISISQTS
A6Q4B6_NITSB/149-231-----------KDPYLEKVYKILYT.......YW..IP..SK.....ESAGAQAKVKIIIDT.KGN.F...D-YQVLQYS
Q3B585_PELLD/193-279-----------ADAYLAAVVETINR....N...W.NFN..SQM..LQRTDGMEVYVEILVLR.DGT.I.Q.Q-IVFVKPS
Q7MSF3_WOLSU/159-241-----------YDEFYAKVNEILYT....H...W..NP.LGF......SYKEESKVIITITA.AGK.F...N-YKISRKS
B8IZ39_DESDA/43-125-----------SGGYAGKMLNKVVE.......IW...APPPA.....LKGDFQVQIEVALDG.TGH...VQD-CSPVRPS
A6QB55_SULNB/179-260-----------ENAYFAHVQRMLED........W...PAQSD......FAGEKATVILYIEP.SGF.F...K-FRIVSQS
D3UGT0_HELM1/165-246-----------YDEWIAKIYKILYK....N...W...S..FA.....FYQDATVSAIITITN.TGQ.F...S-YKILKYS
Q1GYM1_METFK/145-229-----------YAWYTGKIKASIEA..........AIA..EQK..DLAKEQYKIVVELWLSK.DGQ...VER-IEMVNGS
D3RR69_ALLVD/368-455-----------ADRYVPVIRDRVRQ.......FWVRPP..SA......GLDLVAVVSVRLIP.GGE.VVPNS-VRVVRSS
A5G394_GEOUR/150-235-----------IRMYYFSMLQNINE....K...WWIDKNIDR......KGIREVVMNIIVAR.NGE.I.V.A-KQLIRGS
B9M350_GEODF/162-247-----------GSDYSNYIRSRLEDAFRQED.TF......KP......DRNKVVEVKLTIGR.NGKII...S-KRFERSS
B2FRN0_STRMK/261-346-----------SAKYAAAIQAKVLS....Q...W.VRP..DT.....VPLGQRCQITITQIP.GGT.V.M..-..QAKVS
A8ZUI3_DESOH/185-268-----------LEIYNVEMGFQIRK....N...W.VSP..MG.....VDENLQAVIAIHIAA.DGS...LMD-LRFEKRS
B4SDA6_PELPB/204-292-----------ADPYKAEIASIIQR....N...W.VFS..GQM..LKNSYGMSVYVRINIIA.DGT.I.R.Q-IIFDKRA
B9M2A9_GEODF/141-226-----------IQAYYFELLQNINE....K..WW.LDK..DID..RM..GIKEVVMNIVIAR.DGT.I.V.A-KELVHSS
A5G4R6_GEOUR/153-242-----------YGWYTQKVQDEIRN....Q...V.KKR..LEREGGYPKGKNQALVKIFLDQ.RGT...VVK-FSITGTS
A1BET2_CHLPD/204-291-----------SDPYKVSIASIIQN....N...W.EFS..SQL..TKNGYGMEVYVSINILP.DGT.I.N.E-IRFDKRA
B8FBT2_DESAA/51-137-----------LREYITEIGTKCKN....N...W.AMP..VR....FVGQDLEAIIFFKVHP.DGS...LTD-IYFDKRS
A0L4V0_MAGSM/27-113-----------IQQWGAELVAQVEA....N...W.LAP..AG....IDSHGLTVQLSIQWQS.TGA.L.I.M-HGIRRAS
Q74CH4_GEOSL/139-226-----------VREYYFTLLETINE....R..WW.TVA..NAS..GMDLGRSEAMFTIVMKK.SGE.M.V.D-VQLVKST
Q8KEQ1_CHLTE/247-335-----------FDSYKARIADIIQN....N...W.SFS..SQM..VRSTSGMEVYVSLLILP.DGS.V.N.E-IRYDRKS
A1VRE5_POLNA/335-418-----------SAGYAGKVKAKVLP....NV.VF.N.D..DV......EGNPKAEVEVRTTA.DGT.I.M.S-QRLIKSS
B5YKM5_THEYD/128-208-----------SSSYLTVISSLIRH....H...W.NIP..DT.....IPKNLEAVISVRILL.NGQIV...I-EGFEKSS
A0L4V0_MAGSM/176-262-----------QQAWQAQLYPLWQQ....Q...W.QPP..AQ....VDTRTLWGQWRVGWNG.KGG.L.Q.V-LERLQSS
Q7NMQ8_GLOVI/51-136-----------LKAYQVKVRDRVLE.......YW...Q..PP....DIDSDTRLQVLVRVDR.DGK.V...S-KREVKTL
Q5P4Z7_AROAE/214-298-----------GDAYENAVRTKVRG....NL.LR...P..PG.....LSGNPEAVFEVDQLP.SGE.V.L.A-IRLKRSS
D5X4X2_THIK1/239-325-----------SGTYAARIASLVRE....NV.TY.PEI..NQ....I.TGDPRVIISVVLDQFSGT.V.L.S-AKIEHSS
A7ZC41_CAMC1/229-310-----------YDPLMGAITKQIQR....R...W...QSYKA......DSANLAKVKVMIDQ.SGN.F...S-YEILELS
A8EV66_ARCB4/158-241-----------NDDYASKIYEILQS............G..API...SQDTNLVAKVVITIDE.NGK.F...D-YKFQKVS
D6Z217_DESAT/225-312-----------TREYLVRLQQHIQA.......YW.TLPNLPS.....WDENTVATIVITIRR.DGT...LDN-VAFEKQS
Q7P1V4_CHRVO/207-294-----------SAGWIDLVKAKVTP....LV.QI...P..PG.....IAGNPAAVVRVTLLP.TLE...VRA-VQLVKSS
Q39V57_GEOMG/137-224-----------VREYYFELVERVNE....Q..WW.DAA..SGT..GMEPGRQEALVTITVRK.NGE.L.L.D-VRLIRSS
Q3APB6_CHLCH/220-307-----------PASYKAEVASIIQN....N...W.AFS..NPM..LR.GEGMEAYVRIHVLP.NGT.I.S.Q-IVFDRRA
A0RR22_CAMFF/179-261-----------YNKFMGDITEIIQR....K...WVSYK.........ADTNNDAKVQIFIDK.FGK.F...S-YNIISLS
C5ZWS3_9HELI/164-246-----------YDEFYAKVQEILYE....N...W..NP.IQT......QNENRAEIQITIDW.QGK.F...S-YKIVKLS
Q6AKI5_DESPS/184-271-----------EAQWFARVTSHLMQ....F...W.ALP..ELQ..EW.DSRLTTTVIITVNQ.DGR.I.I.N-NYFEHKS
A0L4V0_MAGSM/329-415-----------VAQWFQHVRHAISN....Q...W.QRP..SG....DIHVGRSMMLRVQWLE.NGT.L.E.W-VSTVRPS
B4S6P1_PROA2/191-279-----------YELYLSRVVTIITK....S...W.SFS..GEL..IREQGVVESYVALTIMP.DGS.V.A.D-LVFDRHS
B3E271_GEOLS/153-237-----------GSDYTAYLHSRLKDA.FRET.IS......FQ......SKNPFVMVRLTIDG.DGR.I.I.R-TRFEKSS
A1WS81_VEREI/215-298-----------SGSYSAKVSARVRP....NI.VY...P..DA.....IAGNPRAEVEVRLSP.DGT.I.V.G-KRLLQPS
Q21V13_ALBFT/230-313-----------SASYAGRIRARIKP....NI.VF...A..DD.....IGGNPAAEVEVRTSP.DGT.I.I.S-RKLTKSS
C1A4G0_GEMAT/155-242-----------FPGYLSNIVRQITL....N...W..SP..RR.....VSAALITEVKFMIRR.DGS...VAG-IEVVRAS
B3EKU4_CHLPB/186-274-----------LERYAVAIRAIITR....N...W.SFT..PQL..IQQKGEVIAYVAMTIQT.GGA.V.S.G-ITFDRKS
B1XYG3_LEPCP/250-333-----------SAGYEGRIRARILP....NI.VF...T..GR....I.SGPTVAEVEVRVAP.DGT.I.L.G-SRLLKSS
B5EC49_GEOBB/167-250-----------.SDYPSYLQSRLKD....ALKEV...M.VSQ......TKSPQVIATITVSG.DGR.I.A.E-YHVEKGS
D9S780_FIBSS/205-289-----------..VFLERAKAKIMS....N...F.NPP..NGL...TIDRDAKTMVQFTVER.SGA.I.T.S-VFLKRSS
G2IVB3_PSEUL/227-303-----------.DGYASKVQAKVKP....L...V.QVP..PE.....LSGNPKAVVQVTLLP.SLE.V.R.A-VRLLASS
O25752_HELPY/106-187-----------YQEWYAQIYQILYK....G...W......KG....VFYHKASVSALIMIAK.DGE.F...D-YTILSYS
Q0KB21_CUPNH/161-243-----------.SGYAERVRQRVKP....N...I.IFN..ED.....VSGNPAAVVAVGMAP.DGS.V.L.S-TRLAKSS
Q63RA9_BURPS/256-337-----------.PGYADKVRRRVKP....NI.VW......AG.....ERDSLVTVVAIRCTP.SGD.V.L.S-TSIRRSS

PF03544

A6Q4X0_NITSB/191-266-----------EYRYYPRIARRTRK---------------EG----------LVKVSLKLLP-DGS---VKE.LHIIQSS
A0LDK3_MAGSM/222-300-----------PLPAYPPRARHGRL---------------QG----------SVLLEIQVSK-TGL---VIG.VTILQSS
Q2GCE4_NOVAD/137-217-----------TSNDYPSRALREER---------------EG----------TTGFRVTVGP-DGK---VTD.CQITRSS
A7HI91_ANADF/166-240-----------SRRPYPALAAAMGW---------------TG----------VVRVAFTLRT-DGT---VAD.LRVVKTS
Q3A1X9_PELCD/165-244-----------AAKRYPQMAQQRRQ---------------EG----------VATVTFRLTP-DGR---LAGTPTVTRSS
Q481B0_COLP3/47-122-----------FPARYPKKAVMKSI---------------EG----------CATIEYVITP-QNE---VKD.INVVAST
Q8A0X5_BACTN/206-284-----------QHITYWKNAAKQKE---------------EG----------RVIVTFIVRK-DGQ---ITD.ARVVRSV
Q11RJ7_CYTH3/50-122-----------SHVLYPAVAKRNRI---------------QG----------ECIIGGVLEA-DGT---MTN.VTVVKNI
Q15T33_PSEA6/48-124-----------VTPVYPTLAKQQKL---------------SG----------CVEFSLLIDA-NGR---AVA.PAIIKSF
Q5FRE9_GLUOX/140-219-----------AQAVYPDEAMEENR---------------EG----------HVTASCDILP-TGK---TAN.CTIVSSS
TONB_ECOLI/159-232-----------NQPQYPARAQALRI---------------EG----------QVKVKFDVTP-DGR---VDN.VQILSAK
A3HWG8_9BACT/62-140-----------NHLAYPELAKKQGI---------------EG----------KILVEFTITE-KGV---IQE.IELLNSL
Q8KC43_CHLTE/184-264-----------PRLVYPEMARIAGL---------------EG----------RVFVRVLISE-EGR---PMK.AEIVKRI
Q1DES7_MYXXD/194-272-----------EDVPYPHEARMAGI---------------EG----------SLVLRISVGV-QGQ---LVA.LGVLGPC
Q2LQ35_SYNAS/223-301-----------PLPVYPHIARQKGY---------------EG----------VVLISVEILE-NGS---PGQ.LLVKKSS
A1K7Z1_AZOSB/141-213-----------SQVAYPPQAERLGL---------------SG----------DVVVDFTVAP-DGS---IKN.VAVSRSS
Q02A96_SOLUE/330-401-----------TAVIYPDAARLHNI---------------QG----------VVVVEASLDS-SGN---VTD.TRVLSGP
B2U6W8_RALPJ/138-216-----------PPLVYPSMSQKMGE---------------EG----------RAMVKISIGT-AGE---VTN.VAVTSSS
A7I1P9_CAMHC/172-247-----------TNLIYPEIAKQNGY---------------NG----------KVKLDFDIDS-TRI---PKN.IKIIKSS
Q21EI8_SACD2/206-287-----------GNKHFPKEAIDRGI---------------FG----------SLGLVVTIRP-DGS---VEN.IEISQPS
Q30TX9_SULDN/156-232-----------DNKSYPIAARRRAI---------------QD----------SVEVEFMILI-DGN---VDY.IKVISGH
Q729G1_DESVH/222-300-----------PRPPYPREALHKGA---------------EG----------VVMVRLLLDP-SGR---VVQ.SRIAGGD
Q6LHZ1_PHOPR/146-225-----------VEPRYPARAMKQKA---------------EG----------YVVLSFTIDP-QGR---PTT.IDVIEAK
A0KPL6_AERHH/46-121-----------MESRYPKEAILAGQ---------------TG----------CSSLEYVINP-AGR---AEQ.IRVLDSS
Q0ARB8_MARMM/125-203-----------IEPVFPAREASRGN---------------SG----------SCTVIFDITP-QGQ---TTN.IRSLACD
Q315Y9_DESAG/142-221-----------PAPLYPMQEKRLGR---------------EC----------TVVVRILLAE-DGT---VKQATPVYAED
B0T764_CAUSK/157-237-----------FSRFYPESAMRRGV---------------GG----------MATLNCTVAA-NGT---IQA.CSVLDET
A0KJR7_AERHH/187-265-----------PEPQYPYESRRRGE---------------EG----------RVILNVRVTA-EGT---AAS.VEVDKSS
Q0BW08_GRABC/136-214-----------KPPAYPREAALRGE---------------HG----------TVDTIIHIQP-DGS---VGE.VEIISSS
B0T4A6_CAUSK/49-126-----------PALYYPDRAQRMNV---------------GG----------HVMLDCMADA-QGV---LSD.CALVNET
Q01X37_SOLUE/447-524-----------VNPEYPADLKQQGV---------------TG----------SVVIRAIISK-TGD---ILN.AQVINTV
A4ATZ9_MARSH/162-239-----------KEFSYPQIAAEMGI---------------QG----------RVFVQFAINS-KGY---IDG.IRTRGPD
Q029J5_SOLUE/252-329-----------VEPEYSEEARKAKY---------------QG----------TVLLYVQVSP-EGK---AVN.MRVLHSL
Q7MB07_PHOLL/178-254-----------KHKRYPRRAKKMKQ---------------QG----------IVQVRFSLLD-SGD---LTN.HQLVQSS
Q5FSB2_GLUOX/202-280-----------AHMYYPEEAARAGE---------------DG----------PSSVHVVLDR-SGH---VKS.VRLMSQS
Q30RU9_SULDN/162-238-----------ANLKYPNNARRMGL---------------HG----------TVEIVLVIDT-NGK---LID.VILHKSS
A3HUL5_9BACT/47-126-----------QGLTYPEKAVANGV---------------EG----------NVIYSLKIDS-SGN---LES.VEVKEEV
Q1IVL8_KORVE/72-149-----------PQPNFSDYARKKRL---------------EG----------NVILSLTVLS-DGT---VDD.VKVTRSL
Q47H98_DECAR/152-231-----------RHQEYPRIAALRGW---------------EG----------EVRLRLKVAR-KGN---LLG.VQLDRSS
Q30ZE3_DESAG/139-217-----------VPLKYPLVAKRSNI---------------EG----------YVIVNMLVTA-EGN---PEQ.LSIQAAS
B4U8D4_HYDS0/178-252-----------EHKHYPSLAKERGD---------------SG----------TVYIRVSISA-SGK---VNY.VSLLNSS
Q31F57_THICR/203-284-----------AQNHYPKRAKRRHQ---------------QG----------EVTLQFTLHP-DGH---ISN.LSIVKPA
A6VQV9_ACTSZ/188-264-----------RHKKYSQRARMMRK---------------QG----------VVVVAFSIGN-NGV---ISG.AHIVKSS
Q8A0X5_BACTN/84-162-----------ENIQYPEEVQKLGI---------------AG----------RVITQFVISK-KGE---ITS.VAVVRSL
Q1IV50_KORVE/176-252-----------VKPTYPRMAVMTRT---------------QG----------VVQLHAIIGR-DGS---IQQ.LQVVSGS
Q8P8Z7_XANCP/43-121-----------PPPEYSPQLACVGI---------------GG----------KTVLRVVVGP-QGS---PTD.VTVAQSS
Q5FU97_GLUOX/164-240-----------PPPHYPEAADAAGI---------------GG----------HITVLCQIDP-MGA---AHD.CTVSDGP
A0RP91_CAMFF/173-248-----------ARKNYPNSARRKRQ---------------TG----------IVKVSFMYKA-SGE---VTN.VKIDHSS
A1SZW8_PSYIN/204-282-----------RKPVYPQRAILRNQ---------------QG----------RVVIKLTITK-KGL---PKN.PKILTSS
Q21PK2_SACD2/119-197-----------YGPTLPKKAIELDL---------------DG----------YVIVSYLVSS-RGK---VKK.VSVVEAS
B8CXB0_HALOH/222-296-----------PQPYYPKDLVSQAL---------------SG----------VVELEVSIST-NGE---IEN.VVLSKSS
Q1IQS4_KORVE/48-119-----------VVPTYPELARKINL---------------VA----------TVKVQIVIGP-NGN---VTE.AKAVGGH
A8GHH6_SERP5/179-259-----------RIKRYPPDAQRRRR---------------TG----------MPQVSFSVDA-QGR---VFD.LTLHAPS
A3MYE8_ACTP2/213-287-----------.NNAYPTREKMMRK---------------TG----------VVTIGFTVSS-SGE---LIN.VKVLNSS
B2FIM0_STRMK/171-248-----------.YRYYPAAARSRRQ---------------QG----------TAWVRASIDR-EGR---LLA.LRLEQSS
B4EEN0_BURCJ/164-241-----------.KPDYPSMSRRRGE---------------SG----------TAYVHFVVGV-TGK---IES.IDLQKSS
D6D5C8_9BACE/255-331-----------.EMVYPAGLLEKNV---------------SG----------YALCEFTIDK-EGV---ILR.PHILRST
E3FZI2_STIAD/59-134-----------.PAQYPPQLAAEQV---------------TG----------SVRLELLVDE-AGE---VES.ATLVEGV
E3G004_STIAD/585-657-----------.ELAYTREALEAKV---------------QG----------VMLVKCTINR-QGR---VEN.CRVIKTL
O25304_HELPY/247-319-----------.YLEYPQVAAYLGQ---------------DG----------TNAVEFYLHP-NGD---ITD.LKIIIGS
TONB_VIBCH/165-242-----------.QPRYPRIARKRGI---------------EG----------TVMYEIWLDA-QGN---QIK.QQLLSSS
TONB_NEIMB/208-279-----------.RPAYPTLSMENDE---------------QG----------TVVLSVLVSP-GGH---VES.VKIVKSS
Q0P7Z8_CAMJE/148-221-----------.AQFYPRQAKKMRM---------------QG----------TVKVEFLWKE-NKT---LAD.LKIIEIS
Q79GE6_BORPE/188-263-----------..PVYPMASKRLRE---------------EG----------RVVVLVEIST-QGL---VDR.ASIDTSS
Q88BF0_PSESM/166-245-----------.YKKYPEDARRRGM---------------QG----------VARLRFVVDA-DGN---VLS.YSIANSS
Q8P7J9_XANCP/146-225-----------PAPSYPVAALRAGQ---------------QG----------TVMLRVLVGT-DGR---PAE.VSVQTSS
Q8RI06_FUSNN/157-232-----------.APEFPQSARASGK---------------HG----------KIKIKLKVDK-AGN---VLS.YVIVEGS
Q9I698_PSEAE/233-310-----------.NLNYPDEARRQKL---------------YG----------SLRLLVSINR-DGT---IYE.VQVLESS
R6WST3_9PORP/501-577-----------..IKYPAIAQENGI---------------QG----------RVSCSFVVDT-DGS---LKN.IEVIRGI

PF06519

TOLA_ECOLI/325-419GNTKNNGASGADINNYAGQIKSAIE---------------SKFYDASSYAGKTCTLRIKLAP-DGM...LLD-IKPEGGD
TOLA_HAEIN/274-369GAALGSGDGGKVGDQYAGVIKKEIQ---------------RRFLKDPNFAGKVCRIKIQLGR-DGT...ILG-YQKISGS
Q87QU0_VIBPA/254-352NQQAQGKFVADEVSRYSSIYIQLIQ---------------SRLLKDDYLLGKECRVNIKLIP-TGTDMIVSS-VNVLSGD
Q8EDJ7_SHEON/245-340LSQTMNKQMQTEVGKYTAMIKSTIQ---------------RNLVVDESMRGKTCTVSVRLAN-DGF...VIS-SQTQGGD
Q9CM70_PASMU/291-386GAALGAGDGGKTGDQYAGVIKREIQ---------------RRFLKEPSFANKVCVVEVEFLR-DGT...IAN-YRRVSGP
Q9KR10_VIBCH/254-353NNAARQQFVTSEVGRYGAIYTQLIR---------------QNLLVEDSFRGKQCRVNLKLIP-TGTGALLGS-LTVLDGD
E0SFP4_DICD3/301-389GNNKKSGASGAALDSYGSQVRTAIQ---------------SKFYDWESYKGRTCTLRIRLAP-DGL...LVD-VKSEGGD
Q0WHS2_YERPE/293-385..GKKSGASGADISGYLGQITGAIQ---------------SKFYDADLYKGRTCDLRIKLAP-DGL...LID-VKAEGGD
Q8ZQT6_SALTY/312-405.SGANGGATGADISAYAKQIQVAIQ---------------SRLYDASLYQGKQCVLHISLAP-DGS...LKS-ITSEGGD

PF13103

A1W9I9_ACISJ/236-319G-NK-AWDDAVI-RALH....RTETLP.RD..V---DGRVPS...SLVIGF
C5CPZ7_VARPS/220-305G-LP-SWDEAAE-RGLH....KTDKLP.RD..T---DGRIFP...SLIVSL
B2U7H2_RALPJ/254-338G-NG-AYDEAVM-RAVE....RSDPLP.RD..T---NGKAPS...SVILTF
Q129I5_POLSJ/209-292G-NK-AWDEAVI-KAII....RTGTLPRDD...---DGRVPT...PMILEF
D1AZT9_SULD5/170-253Y-NN-DFNTKLK-EFLKS..MESEEFPKYD...---KGELF....ELPVEF
Q31H80_THICR/253-339A-NE-QFKKDAE-KAVY....RAEPLPQPP..I---KELFER...NIKFIF
C6WZ34_METML/176-263G-IA-GCDDAVE-RAIR....ASEPLPLPE...---DKTLFPQFRTLKLTF
D0J2W4_COMT2/200-283G-NA-AWDEAVV-RALH....KTDKLP.RD..I---DGKVPS...DLVIGF
C7LX38_DESBD/237-319G-RS-DFDASVM-RAIE....DTKKL.PPL.P.---.ETLDA...TLAITF
A0L4V1_MAGSM/245-331G-FA-PYDDSVQ-RAIA....ATRNLPKPP.SH---CSACRG...EITISF
A6Q4B6_NITSB/149-231N-NE-TFNEELD-EYLQT..MKSEHFPKPA...---.QKREL...TVLFVA
Q3B585_PELLD/193-279L-SP-YLNNSVK-NALE....KSSPLP..P.RS---DGPPSE...RFKFVF
Q7MSF3_WOLSU/159-241G-NS-AFDSALE-EFLEK..MKTVDFPPFP..R---GDKT.....NIEVTF
B8IZ39_DESDA/43-125G-ME-ALDSSAC-GAVR....QIGNFGKTP...---HGKAL....EVHLSF
A6QB55_SULNB/179-260N-IP-PFNRGLK-EFLE....QLQETGFGP..H---NAGRTY...KFKAEF
D3UGT0_HELM1/165-246P-FE-EYNNGVI-AILEN..LRDQKLPPYP...---NGNLI....HIEVNF
Q1GYM1_METFK/145-229G-DE-KKDALLR-QALS....SVKRISDPP...---PEDMPQ...PVKLRI
D3RR69_ALLVD/368-455G-HT-AFDQSVV-AAVY....NASPLPVPS...---.GPPFERFREFDFTF
A5G394_GEOUR/150-235G-NA-AYDKEVL-KALE....AAGPLPPLPESY---YGD......FFQAPI
B9M350_GEODF/162-247N-DI-MFNNAVE-RAISR..AERDFRPPP....---.GGGSY...EHGFVF
B2FRN0_STRMK/261-346P-NC-PYDEAGK-RSIEAAVLNAQPLP.....Y---RGFESVFARTLNFTF
A8ZUI3_DESOH/185-268G-ND-TYDESAR-KAIL....KSVPLPPLP...---KGFVLH...RVNLEF
B4SDA6_PELPB/204-292P-SE-YLNSSVK-KALE....KSSPLPVLP.KE---EGFRDV...WIGFVF
B9M2A9_GEODF/141-226G-NT-GYDKAVL-KALD....GAGSLPPLP.ET---YNGD.....FFLAPI
A5G4R6_GEOUR/153-242G-NE-RMDKAVL-EAIR....LI.HISEPP.PE---GMPSGM...NLKISL
A1BET2_CHLPD/204-291A-SE-YLNNSVK-KALE....KSSPLPDLP.KK---YG.ASL...RIGFVF
B8FBT2_DESAA/51-137G-ST-DYDGSVE-KAVK....KSNPVCPFP.EN---LEKTPI...EMAIRF
A0L4V0_MAGSM/27-113G-QR-AFDESVV-HAIE....QSQNLPAPP.VG---CQICLK...PITFNF
Q74CH4_GEOSL/139-226G-SP-AYDRLIL-QAIQ....AANPLPPLP.DS---YTSE.....LFLAPV
Q8KEQ1_CHLTE/247-335S-SE-YLNNSVK-NALA....KSMPFPSLP.RE---YGAKGI...WVGFVF
A1VRE5_POLNA/335-418G-NK-AWDDAVI-KAIV....RTGSLP.RD..V---DGRVPT...PMIIEF
B5YKM5_THEYD/128-208G-NT-LFDSSVI-KALK....NSSPLPPPK...---.GEV.....VVGLRF
A0L4V0_MAGSM/176-262G-HG-AVDAAIV-QALQ....GITQLPTPP.PH---CTVCQQ...PMVMTF
Q7NMQ8_GLOVI/51-136G-DA-PPSKAAE-EAVLDAIGRAQPFPTVP...---PNVAPF...YVEVRF
Q5P4Z7_AROAE/214-298G-IP-ALDEAIE-RAIR....RSSPLPLPQ...---AKELFE..RTLELKF
D5X4X2_THIK1/239-325G-VP-SWDQAVL-RAIE....RVHRFP.PD..S---NGKYWT...PMLVKA
A7ZC41_CAMC1/229-310Y-NE-EFNAKVK-ECLEK..LTAEKFP.....F---NPDKST...TFNLNL
A8EV66_ARCB4/158-241G-DA-AYDASLK-AYLDG..QRNVAYPVPP..S---GKVVKY...SVDFKF
D6Z217_DESAT/225-312E-NM-YFNQLAR-KAID....DAAPMPAFPAAL---RDSEL....EIGFNF
Q7P1V4_CHRVO/207-294G-VP-AYDDAVQ-RAVW....EAKTFPKLP..A---GANFNDGYRTFTLTF
Q39V57_GEOMG/137-224G-ND-QYDRLIM-DTLQ....AASNLPPLP.DS---YPGE.....FFQAPL
Q3APB6_CHLCH/220-307A-SE-YLNNSIK-RALE....KSSPLPVIP.QE---AGGRDM...WIGFLF
A0RR22_CAMFF/179-261Y-NK-EFNSKVK-EFLER..LKETQFPTPP...---.TNTTT...SVALTL
C5ZWS3_9HELI/164-246G-NL-EFDKALQ-EFLDI..MQNKEFPKYE...---.GGDST...NIIVTF
Q6AKI5_DESPS/184-271G-NR-IFDQFVK-KSLQ....DADPLPKMP...---.AAMKQYRFEFGLHF
A0L4V0_MAGSM/329-415G-HE-GYDETVL-KAVE....AVAQLPPPP.EG---CTLCLR...PIYITM
B4S6P1_PROA2/191-279I-SS-YFDETVK-KAIE....KASPLPPVP.AD---VSLSAL...RIGLIF
B3E271_GEOLS/153-237G-DK-VFELSVT-RAITL..AEQTIVPPP....---.GRTVF...EGAFVF
A1WS81_VEREI/215-298T-SK-AWDDAVL-RALD....KTETLP.RD..V---DGRVPP...SLVIGF
Q21V13_ALBFT/230-313G-VK-SWDEAVL-RAID....KTEVLP.RD..V---DGRVIS...PLTISF
C1A4G0_GEMAT/155-242G-DR-LYDLDGM-GAVEA.VGSTRSFGPLP.SG---WSDDVL...VVYFTF
B3EKU4_CHLPB/186-274S-SQ-YFDDTVL-KAIE....KSSPLPPVP.PE---VSGKAL...RIGFVF
B1XYG3_LEPCP/250-333G-LA-EWDQAVL-RAIE....RTEILP.RD..I---DGRVPP...LMVLSF
B5EC49_GEOBB/167-250G-DP-LFDDAVH-RAVT...LAGKSLVPPP...---.GGAPF...KRMFRF
D9S780_FIBSS/205-289S-NS-AWDHLSM-RAV.....KISKLPELP.PT---YKGSSL...VLQFNF
G2IVB3_PSEUL/227-303G-NT-AYDEAVQ-RAIW....EAKTFPSLP...---AGASFT.........
O25752_HELPY/106-187D-FK-DYNKSVM-TLLND..LKKVDFPPYP...---.GGSMI...SIQVNF
Q0KB21_CUPNH/161-243G-NA-AWDNAVL-RAVQ....RSDPLP.RD..E---NGVAPS...NILITF
Q63RA9_BURPS/256-337G-NS-GWDQAVI-SAIQ....ASVPLP.PD..T---NGRTPS...EITITF

PF03544

A6Q4X0_NITSB/191-266G.HS.ILDRAAL.QTVQK..ASSHFPKPAQ......AVELTI...PLEYRL
A0LDK3_MAGSM/222-300G.HL.ILDRTAR.QAVKR...WSFKPALRH.GL...AVAATV.QVPIHFRL
Q2GCE4_NOVAD/137-217G.SP.DLDEATC.SNVRR..RARFAPAMDGEGN...PTTGSY.SNSIRWVI
A7HI91_ANADF/166-240G.RK.ALDECAL.DDVRA...SVPFPRPSE......EQAVEV...PIVYVL
Q3A1X9_PELCD/165-244G.YR.QLDKAAL.RAVNR..GAPYPAFPLD......PRQMKALEIPVKFYL
Q481B0_COLP3/47-122S..K.YFAKAAE.NVIQN...WKWSELPKS.IL...TQPVKT...QTRFDF
Q8A0X5_BACTN/206-284S.PT..LDAEAL.RIISN..MPKWEPGENN.GV...PVSVKY.TIPIMFRL
Q11RJ7_CYTH3/50-122G.GG..CGEEAA.RVVKL...LKFRAPGF.......KSQTSI...PVYFKL
Q15T33_PSEA6/48-124P.KG.VFEKQAT.IAIEK...WVWVPTQTN.TK...RQPVML...TFQHDF
Q5FRE9_GLUOX/140-219G.GH.EFVESAL.DFLRR...ARYQPAVVN.GA...PVTEHHHVLHIDFTM
TONB_ECOLI/159-232P.AN.MFEREVK.NAMRR...WRYEPGKPGSGI..........VVNILFKI
A3HWG8_9BACT/62-140S.ED..LDKEAL.RLVRN..MPDWQPAYQD.GK...ARQVKY.QLPILFKL
Q8KC43_CHLTE/184-264PADQTVFDKEAV.RIAME...TKYTAGVQN.GR...KVRVWM.TIPVRFTL
Q1DES7_MYXXD/194-272P.HP.LLCEAAQ.EAVRH..AAPFPPPPPALGD...RVTVEL...PFNYHL
Q2LQ35_SYNAS/223-301G.YA.ILDQAAL.NAVKK...WKFYPAIKN.NV...RIRTWG.DVPIRFVL
A1K7Z1_AZOSB/141-213N..S.VFNAAAT.AAVAK.......LRCSGQGQ...DVRVRV...PFAFRL
Q02A96_SOLUE/330-401P....ELRRAAQ.QAVLQ...WHFSMEGS.......SNTRQV...KINFEL
B2U6W8_RALPJ/138-216G.SP.RLDRAAT.DAARA...IKCSPYKQN.GR...AVPVVA.SKPFVFKL
A7I1P9_CAMHC/172-247S.YS.ILDKNAI.YTVKK..AAKDFPEIDK......KYNITI...NINFNL
Q21EI8_SACD2/206-287G.HS.LLDDAAL.QIVKL..SAPFAPFPPEMRK...KVDRLEIIRTWRFEI
Q30TX9_SULDN/156-232N....IFEKSAT.QAIEN.....SFPMEIDKTLFDFPKKFKI...KIAYIL
Q729G1_DESVH/222-300M.AD.IFAETTL.ETVER...WRFKPCGRQ.GR...NVSCEV.EIPVEFRI
Q6LHZ1_PHOPR/146-225P.RR.LFEKEAV.RALRK...WKYQPKVVD.GK...SIAQVGQTVRLEFKI
A0KPL6_AERHH/46-121D.PQ..FSDAAI.AVLQQ...WQWQATPTN.SQ...HIPVKS...RTRFEF
Q0ARB8_MARMM/125-203S.RA..FEQATL.NAVSR...WRYNPQIEN.GE...PIYFRGATTRLDYRL
Q315Y9_DESAG/142-221D.TR.TFHEAAV.ETVLR...WRFVPCRKD.GR...AVQCIA.EQPFTFSL
B0T764_CAUSK/157-237P.SEEGFGKAAV.KLSRF...FKMSPQMEN.GQ...AVDGASVRIPIRFNA
A0KJR7_AERHH/187-265G.YR.RLDMTAR.KTVSR...WKFIPAKQN.NV...AVEASA.KVTIIFKL
Q0BW08_GRABC/136-214G.YA.MLDVATL.QALKK...WRFHPAMQD.GH...PVSAIF.PFSVNFVT
B0T4A6_CAUSK/49-126PKDW.DFGVAAL.KMARAG.VIHKIPTTAG......GGRVAV...PVTFEP
Q01X37_SOLUE/447-524H.PG..LAQAAL.DAVKQ...WRYQPTLLN.GQ...PVEVIT.TVTIAFEL
A4ATZ9_MARSH/162-239P....GLEKEAA.RIVSS..LPKMTPGMQR.GR...AVTVPY.SIPVNFKL
Q029J5_SOLUE/252-329G.LG..LDEKAM.EAVKK...WRFKPGTKD.GK...PVTVEA.QIEVNFRL
Q7MB07_PHOLL/178-254G.AD.ELDRAAL.AAIQQ..ARSVGLKPAGL.....PRDLTL...AIEFNL
Q5FSB2_GLUOX/202-280G.SY.SLDAATT.GMFQG...AHLPPVPPD.MK...GDHFDI.DVTINYIL
Q30RU9_SULDN/162-238G.HS.LLDKSAL.KSADKLCKATLPA..........PQRVSRVMLPIYFAL
A3HUL5_9BACT/47-126S.DE..LAAQAE.ESLAKL.TADWTPSKLN.GE...AVDREY.LVIFSYNI
Q1IVL8_KORVE/72-149E.KS..LDEQAI.KTVRT...WKFEPSMYQ.GK...PISYST.AVEVNFRL
Q47H98_DECAR/152-231G.FE.VLDQHAL.AMLEA..LASLPPLPDALES..NEIQVVV...PINYKL
Q30ZE3_DESAG/139-217P.AG.IFEESAL.EAARQ...SRFTPGKLN.GQ...AVDTWV.QQPFEFKV
B4U8D4_HYDS0/178-252G.SF.ILDEYTK.ELIKH...LQFPAPPKG......PITFDL...KVHYRL
Q31F57_THICR/203-284H.FE.SLNEATL.NIIRHTMAYQYTPFPKEMRQ..RPKTIQV...PIEYIL
A6VQV9_ACTSZ/188-264G.TE.DLDNSAL.AAVNA..AKSVGPKPAGM.....SNAISV...PISFKI
Q8A0X5_BACTN/84-162H.PE..LDKQAI.QAITA..MPTWTPGKKD.GK...VVNVKF.TLPINFHP
Q1IV50_KORVE/176-252P....FLVQAAL.EAVQQ...WKYRPYLLN.GE...PVEVET.QITVNFTL
Q8P8Z7_XANCP/43-121G.QP.VLDEAAQ.TRVRE...WQFKAATRN.GQ...PVPQTI.QVPVDFKP
Q5FU97_GLUOX/164-240P....ILQRASL.AYFSL...ARYYPALKE.GQ...PVAAQY.RGNITWDT
A0RP91_CAMFF/173-248T.YM.VLDEAVL.TAIQK..TKSKFPSIKN......DTNFQI...EVEFSL
A1SZW8_PSYIN/204-282G.FP.LLDDAVL.AFVDQ...ELFMPALQG.ED...QVMSEQ.LFAFRFEL
Q21PK2_SACD2/119-197D..E.MFVKSSI.KAAKK...FVYLPAVNN.GK...AVTSGPLKNKFVFNL
B8CXB0_HALOH/222-296G.IE.QMDRNAQ.LTIKR..GWKFNPYKK.......PYTIKV...MIEYKV
Q1IQS4_KORVE/48-119P....LLIGPSI.DAAKQ...WRYEPA....GE...STTTII...EFHFGP
A8GHH6_SERP5/179-259G.TA.SLDREAL.AVVMR..AQPLPPPPVEMLRQ.GNVQVTM...PIDFNL
A3MYE8_ACTP2/213-287G.NG.NLDNAAV.KAAQS...TKVSPPPA..GF...PSNVTV...PVKFSI
B2FIM0_STRMK/171-248G.QP.MLDDAAL.QTFRR..AQPLPPIPGELKA...PQELVV...PVEYYL
B4EEN0_BURCJ/164-241G.YP.RLDDAAL.DAMRS...TTCRPYIEN.GQ...AIRAAR.TQPYSFGL
D6D5C8_9BACE/255-331H.PE..FAEEAL.RIVKG..MPKWSPALAG.GK...PADSNY.TLYIPFR.
E3FZI2_STIAD/59-134H..P.LLNEAAL.HAAPG...LRFVPATLN.GQ...PVPVRL.GFEYRFE.
E3G004_STIAD/585-657P....HMEAPVL.EALKS...RVYKPILYQ.GQ...PVAVDY.VFNIR...
O25304_HELPY/247-319E.YK.MLDDNTL.KTIQI..AYKDYPRPKT.K.....TLIRI...RVRY..
TONB_VIBCH/165-242G.TE.ALDQSAL.EAIKQ...WKFSPHILD.GV...PVAHRI.HIPIRFKL
TONB_NEIMB/208-279G.FS.RLDNAAR.KAAQN...GHFQANA........WTEFKV...PVKFEL
Q0P7Z8_CAMJE/148-221G.YD.LLDKSAL.ESIRK...ASLNFPHYN.G....DLRITL...PIIYD.
Q79GE6_BORPE/188-263G.FS.RLDESAL.AAARK...ARFKPLTRN.GV...AYPAKA.KLPFDFV.
Q88BF0_PSESM/166-245G.SP.ALDRATM.EMIRR..AQPLPKPPKEILN...NGTIEI.LAPFVYSL
Q8P7J9_XANCP/146-225G.HR.ALDLAARSQVLRS...WRFQPAMQN.GQ...AVQAYG.LVPVSFSL
Q8RI06_FUSNN/157-232G.VP.EIDASVE.RVVGS...WRVKLLKK..GK...PVNGTF.YLNYNFN.
Q9I698_PSEAE/233-310G.EP.ILDQAAQ.RIVRL..AAPYAPFSGDLAD...IDRLEI.IRTWRF..
R6WST3_9PORP/501-577D.PS..LDREAV.RVIRE..MPKWNPGVQN.NM...AVAVKY.TVPVTFRL

PF06519

TOLA_ECOLI/325-419P----ALCQAAL-AA.AK---LAKIPKPPS------Q.AVYEVFKNAPLDF
TOLA_HAEIN/274-369D----DICSAAL-SAVAR---TKKVPAAPS------D.EIYEKYKSPIIDF
Q87QU0_VIBPA/254-352S----RVCAAAK-SAIAQ---VPSFPMSTD------S.TVNQRLKDINLTV
Q8EDJ7_SHEON/245-340P----NVCRATK-AAILK---AGKLPVSPD------P.AVYNLMKEINLIV
Q9CM70_PASMU/291-386D----DICQAAV-SAVAR---TKKVPPAPT------D.DIYQRYKKSPIEF
Q9KR10_VIBCH/254-353S----RLCAATK-RAVAQ---VNSFPLPKD------QPDVVEKLKNINLTV
E0SFP4_DICD3/301-389P----ALCQAAI-AA.AK---QARIPKPPS------S.DVYEAFK......
Q0WHS2_YERPE/293-385P----ALCQAAI-AA.AK---QAKIPKPPS------T.DVYEQFKNAPLVF
Q8ZQT6_SALTY/312-405P----ALCQAAL-MA.AK---TAKIPKPPS------Q.AVYEKIKDAKLDF

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (C,A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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