Sequence alignment for CL0461

PF02068

B9S4K8_RICCO/11-85-.CNDRCGCP----------------------VPCPGGTA......CRCRISQAAGGAGD....AHSKCSCGEH.-----
I1N1Y7_SOYBN/15-89-ICDNKCGCT----------------------LPCTGGST......CRCTSAGTATGGGATGGGDHVTCSCGEH.-----
M4C8R2_BRARP/12-86-GCNSRCGCP----------------------SPCPGGES......CRCRMSAASGGDQ.....EHNMCPCGEH.-----
B9HPX5_POPTR/12-90-..NDGDGCP----------------------VPCPGGTA......RRILAAGGSDTGGEGEGAGHKKCSCGEHY-----
C5WTK2_SORBI/2-78-GCDDKCGCA----------------------VPCPGGKD......CRCTSGSGAGGQR.....EHTTCGCGEH.-----
I1KZ18_SOYBN/15-90-ICDNKCGCT----------------------VPCTGGSTCSVSHACRCTSVGMTTGGG.....DHVTCSCGEY.-----
EC1_WHEAT/2-78-GCDDKCGCA----------------------VPCPGGTG......CRCTSARSGAAAG.....EHTTCGCGEH.-----
D8SEP5_SELML/16-87-GCTAGCACG----------------------NPCPCGDN......CKCAATGAAGRSGH....DGVFCECGEN.-----
K4B484_SOLLC/11-82-.CNERCGCP----------------------CPCPGGTS......CRCASSDANM........EHKRCSCGEH.-----
I1QVK0_ORYGL/2-77-GCDDKCGCA----------------------VPCPGGTG......CRCASSARSGGG......DHTTCSCGDH.-----
MT4A_ARATH/12-84-GCNDSCGCP----------------------SPCPGGNS......CRCRMREASAGDQ.....GHMVCPCGEH.-----

PF12749

Q231A6_TETTS/1-105--MDTQTQTKVTVGCSC...............NPCKCQPL------CKCGTTAACNCQPCE---NCDPCSCNPCK..CGA
K1PN32_CRAGI/1-107--MSDPCNCTATGTCVC.........SDSCPATGCKCGPG------CKCG...........---..DGCKCSGCKVKCNC
ZYM1_SCHPO/1-49--MEHTTQCKSKQG..................KPCDCQ..------...............---..SKCGCQDCK.....
Y7870_DICDI/1-51--MTHS............................CKCGDS------CQCG...........---..DKCTCGPKE.....
B3LVP3_DROAN/1-69--MFNAKLFVLLTVALCLVQSCTIDEPEPEPEAPCKCGKP------...............---..DGSSCGAVK.....

PF05522

MTA_STRPU/2-64--PDVKCVCCKEG-------------------KECACFGQ------DCCKTGECCK--------DG..TCCG...-----
MTB_SPHGR/3-67--PDVKCVCCQDG-------------------EECPCKGG------ECCITGTCCK--------EGDGLCCG...-----
MT_LYTPI/4-68--PDVKCFCCRDG-------------------KECACGGG------ECCITGKCCK--------EGDRTCCG...-----
O76953_9ANNE/3-73--CCGFDACPRRG-------------------AACAC.TN------CRCLKSECSP--------NYRKLCCADS.-----
MT_EISFE/4-75--CCGKSTCAREG-------------------STCCC.TN------CRCLKSECLP--------GCKKLCCADAE-----
Q9GRJ0_LUMRU/9-77--CCGNKTCPREG-------------------STCAC.SK------CRCPKDDCLP--------NCKKLCCADA.-----
Q966Z5_PARLI/2-66--PDTKCVCCQDG-------------------KQCPCAGQ------ECCITGKCCK--------DGASVCCG...-----

PF00131

MT3_BOVIN/1-68-MDPETCPCPT.G-------------------GSCTCSDP------CKCEGCTCA---------SSKKSCCSCCP-----
MT4_CANLF/1-62-MDPGECTCMS.G-------------------GICICGDN------CKCTTCNCK---------TCRKSCCPCCP-----
MT2C_RABIT/1-62-MDP.NCSCATAG-------------------DSCTCANS------CTCKACKCT---------SCKKSCCSCCP-----
F6PZ48_MACMU/1-61-MDP.NCSCAT.D-------------------VSCACAGS------CKCKECKCT---------SCKKSCCFCCP-----
Q9NG19_CRAGI/2-66-SDP..CNCTE.T-------------------GTCVCSDS------CPATGCKCG---------PGCKCGDGCKC-----
U3JYH7_FICAL/2-63-.DSQDCPCAT.G-------------------GTCTCGDN------CKCKNCKCT---------SCKKGCCSCCP-----
W5K846_ASTMX/1-60-MDP..CDCAK.T-------------------GSCNCGAS------CKCTNCQCT---------TCQKSCCPCCP-----

PF12809

CRS5_YEAST/1-69-MTVKICDCE----------------------GEC-CKDS------CHCGS-------------TCLPSCSGGEK-----
J5RII1_SACK1/1-69-MAVKKCACE----------------------NEC-CKDS------CKCGA-------------TCVKNCVGGKK-----
J8PI13_SACAR/1-69-MTVKKCACK----------------------DEC-CRDS------CKCGT-------------DCVPSCSGNEK-----

PF11403

MTCU1_YEAST/9-47--QNEGHECQ------------------------------------CQCGSCK-----------NNEQCQ----------
J4U064_SACK1/9-47--QNEGHECQ------------------------------------CQCGSCK-----------NNKQCQ----------

PF02069

K9U5A2_9CYAN/12-63TVTSMKCACDN-----------------------------------CLCVVSLEDAIQK-----DGKAYCS---------
Q8DK53_THEEB/3-54TVTQMKCACPH-----------------------------------CLCIVSLNDAIMV-----NGKPYCS---------
K9RIA9_9CYAN/3-53AVDLMKCACDK-----------------------------------CLCIVKVETAIDR-----DGKHYCS---------
K9S806_9CYAN/3-53TVTQMKCACES-----------------------------------CLCVVNLSDAVHK-----DEKYYCC---------
K9Z103_CYAAP/5-55TVTQMKCACPS-----------------------------------CLCIIDISQAISR-----DGHYYCS---------
S6AIY4_PSERE/2-49..TEQRCACAS-----------------------------------CSCVVD.ARALVR-----DGKAYCC---------
K9PAC9_CYAGP/10-58...TLQCACPG-----------------------------------CHCTVQEDSPFRN-----GALLFCS---------
K9PV70_9CYAN/3-53TATQLKCDCPN-----------------------------------CTCMVDLASAVKK-----DGKNYCS---------
K8GTB8_9CYAN/3-53TVTQMKCACPD-----------------------------------CLCIVNLSDAVMK-----DGKAYCG---------
B0UBD7_METS4/7-56.VEMVKCACED-----------------------------------CVCVVPLAKAVQH-----DGRAYCC---------
B7KK77_CYAP7/3-53TVTQMKCACES-----------------------------------CLCIVDLETAIKK-----DGKSYCS---------
Q3J765_NITOC/6-52QSSTMKCAHAP-----------------------------------CSCVVTAEEGVKK-----DGQVYCS---------
B7JYR9_CYAP8/5-55TVTQMKCACSS-----------------------------------CVCIVDLSDAIQK-----DGKYYCS---------
A0ZMC0_NODSP/3-53TVTQMKCACPT-----------------------------------CLCIVSLEDAINK-----EGKYYCS---------
MT_SYNE7/3-54STTLVKCACEP-----------------------------------CLCNVDPSKAIDR-----NGLYYCS---------
K9VK01_9CYAN/3-53TATQTKCACPS-----------------------------------CSCVVNVSEAIEK-----DGKQYCS---------
D4ZYS3_ARTPN/3-53TVTQMKCACES-----------------------------------CLCIVDTTKAIAK-----NGQYYCS---------
K9YQD6_CYASC/3-53TVTQMKCACPS-----------------------------------CLCIVNLSDAIQK-----NDHYYCC---------
K9THX7_9CYAN/3-53TVTQMKCACES-----------------------------------CLCVVPTDKAVMK-----DGKPYCS---------
Q7NFU4_GLOVI/3-53TVTQMKCACEA-----------------------------------CLCVVTLSEALEK-----DGKYFCS---------
Q88HU1_PSEPK/2-49..NDQRCACTH-----------------------------------CSCTVD.ANALQR-----DGKAYCC---------
K9XVF5_STAC7/3-53TVTSMKCACDR-----------------------------------CLCVVSLEDAVKK-----DGKYYCC---------
K9SJ94_9CYAN/24-77SATLVKCACSK-----------------------------------CLCVIDPSDAIEA-----NGKYYCC---------
K9V6M1_9CYAN/3-53SVTLMKCACQT-----------------------------------CLCVVSTQDAVQK-----DNKYYCS---------
B1LW41_METRJ/6-55.VEMVKCACQD-----------------------------------CVCVIPVAKAVSR-----DGKAYCC---------
C5AVV7_METEA/6-55.VDMVKCACPD-----------------------------------CVCVVSVTKAVKR-----DEKAFCC---------
K9VWZ1_9CYAN/3-53TVTSMKCACDS-----------------------------------CLCVVNIGEAIEK-----DEKYYCS---------
K9T9H0_9CYAN/20-70TVTSMKCACES-----------------------------------CLCIVSLENALQK-----NGKYYCC---------
Q7U999_SYNPX/2-52.STAIKCACPK-----------------------------------CTCMVAEESAIVL-----QGKFFCS---------

PF02068

B9S4K8_RICCO/11-85---CGC-------NPCTCPKGLETVG-----------------V..GRASC-KCGP----G---CTCA--TCAS---
I1N1Y7_SOYBN/15-89---CGC-------NPCSCPKIAA...-----------------...AGSGC-RCGT----D---CACA--SC.R---
M4C8R2_BRARP/12-86---CGC-------NPCTCAKTQTSAK-----------------V..GKAFC-TCGE----G---CTCA--TCAA---
B9HPX5_POPTR/12-90---CGC-------NPCTCPRSVVTTG-----------------V..GKAYC-TCGA----G---CACP--TCSS---
C5WTK2_SORBI/2-78---CEC-------SPCTCGRATMPSG-----------------RQNRKANC-SCGP----A---CNCA--SCAS---
I1KZ18_SOYBN/15-90---CGC-------NPCSCPKTAA...-----------------...SGTGC-RCGT----D---CSCA--SC.R---
EC1_WHEAT/2-78---CGC-------NPCACGREGTPSG-----------------RANRRANC-SCGA----A---CNCA--SCGS---
D8SEP5_SELML/16-87---CKC-------ETCTCAKITAS..-----------------...GEPFC-KCGR----T---CSCE--TC.S---
K4B484_SOLLC/11-82---CGC-------NPCTCSKSEGTTA-----------------AA.GKSNC-KCGP----G---CACP--TCAA---
I1QVK0_ORYGL/2-77---CGC-------NPCRCGRESQPTG-----------------RENRRAGC-SCGD----S---CTCA--SCGS---
MT4A_ARATH/12-84---CGC-------NPCNCPKTQTQT.-----------------...SAKGC-TCGE----G---CTCA--SCAT---

PF12749

Q231A6_TETTS/1-105TESCGC.......NPCKCAECKCGSHTEKTSACKCNPCACNPCNCGSTSNC-KC..----.---NPC---KCAE---
K1PN32_CRAGI/1-107SGSCGCGKGCTGPENCKCANDSECGCKVKCNCSGSCGCGK...GCTGPESC-KCAN----D---SGC---GCKK---
ZYM1_SCHPO/1-49.ESCGC.....................................KSSAVDNC-KC..----.---SSC---KCAS---
Y7870_DICDI/1-51TPKCGC.......SDCKCGD.......................KCSS..DC-KC..----.---TSC---TCKK---
B3LVP3_DROAN/1-69SSGCGC.......KPCRCG...............................C-PC..----.---RSC---SNVD---

PF05522

MTA_STRPU/2-64..ICTN-------AACKCA-----------------------------NGC-KCGS----G...CSCTEGNCAC---
MTB_SPHGR/3-67..KCSN-------AACKCA-----------------------------DGC-KCGS----G...CSCTLGNCTC---
MT_LYTPI/4-68..KCSN-------AACKCA-----------------------------DGC-KCEG----A...CACTMGNCTC---
O76953_9ANNE/3-73QGKCGN-------AGCKCG-----------------------------AAC-KCAA----GACASGCKKGCCGD---
MT_EISFE/4-75KGKCGN-------AGCKCG-----------------------------AAC-KCSA----GSCAAGCKKGCCGD---
Q9GRJ0_LUMRU/9-77..QCGN-------AGCSCG-----------------------------AAC-KCAA----GSCASGCKKGCCAD---
Q966Z5_PARLI/2-66..TCSN-------AACKCT-----------------------------GGC-KCEG----G...CQCTEGNCTC---

PF00131

MT3_BOVIN/1-68---AEC------...EKCA-----------------------------KDC-VCKGGEGAEAEEKKC---SCCQ---
MT4_CANLF/1-62---PGC------...AKCA-----------------------------QGC-ICKG......GSDKC---SCCA---
MT2C_RABIT/1-62---PGC------...AKCA-----------------------------QGC-ICKG....ASD..KC---SCCA---
F6PZ48_MACMU/1-61---VGC------...AKCA-----------------------------QGC-VCKE......ASEKC---SCCA---
Q9NG19_CRAGI/2-66---SGC------KVKCNCS-----------------------------GSC-GCGK...GCTGPENC---KCA.---
U3JYH7_FICAL/2-63---AGC------...AKCA-----------------------------QGC-VCKG...PPSA..KC---SCCK---
W5K846_ASTMX/1-60---SGC------...SKCA-----------------------------SGC-VCKG...NA...CGS---SCCQ---

PF12809

CRS5_YEAST/1-69---CKCDHSTGSPQCKSCG-----------------------------EKC-KCET-------TCTCEKSKCNCEKC
J5RII1_SACK1/1-69---CKCDHNPESSQCKSCG-----------------------------ENC-RCGT-------TCVCEKSKCSCEKC
J8PI13_SACAR/1-69---CRCDHNSESTQCNNCG-----------------------------ESC-KCGA-------TCTCEKSKCTCEKC

PF11403

MTCU1_YEAST/9-47-------------KSCSCP-----------------------------TGC-NSDD-------KCPCG---------
J4U064_SACK1/9-47-------------KSCRCP-----------------------------IGC-NSDD-------KCPCG---------

PF02069

K9U5A2_9CYAN/12-63-------------EACASGHPDGS..----------------------SGC.GHTG--------CGC----------
Q8DK53_THEEB/3-54-------------EVCANGTCKEN..----------------------SGC.GHAG--------CGC----------
K9RIA9_9CYAN/3-53-------------EACAEGHKTI...----------------------TGC.GHSG--------CGC----------
K9S806_9CYAN/3-53-------------EACANGHQSG...----------------------DGC.GHSG--------CGC----------
K9Z103_CYAAP/5-55-------------TACAEGHKEG...----------------------EGC.GHSG--------CGC----------
S6AIY4_PSERE/2-49-------------AACADGHKDG...----------------------EPC.HETG--------CHC----------
K9PAC9_CYAGP/10-58-------------EVCAKGHPNG...----------------------EPCHASCG--------CEC----------
K9PV70_9CYAN/3-53-------------TTCANGHPEG...----------------------GCC.AESS--------CSC----------
K8GTB8_9CYAN/3-53-------------EACANGHPEG...----------------------AGC.GHTG--------CGC----------
B0UBD7_METS4/7-56-------------DECATGHPDH...----------------------AGC.GHAG--------CTC----------
B7KK77_CYAP7/3-53-------------EACANGHPEG...----------------------SGC.GHQG--------CGC----------
Q3J765_NITOC/6-52-------------EACARE.......----------------------QGC.EHGA--------CAC----------
B7JYR9_CYAP8/5-55-------------DACANGHPDG...----------------------AGC.SHHG--------CEC----------
A0ZMC0_NODSP/3-53-------------EGCAEGHKTI...----------------------KGC.GHNG--------CGC----------
MT_SYNE7/3-54-------------EACADGHTGGS..----------------------KGC.GHTG--------CNC----------
K9VK01_9CYAN/3-53-------------SACADGHPNG...----------------------QGC.GHTG--------CEC----------
D4ZYS3_ARTPN/3-53-------------EACANGHPNG...----------------------DGC.GHKG--------CNC----------
K9YQD6_CYASC/3-53-------------QACADGHPNG...----------------------SGC.GHTG--------CGC----------
K9THX7_9CYAN/3-53-------------DACANGHVDG...----------------------TGC.GHSG--------CDC----------
Q7NFU4_GLOVI/3-53-------------GPCANGHPDG...----------------------SGC.GHTG--------CEC----------
Q88HU1_PSEPK/2-49-------------EACASGHRKG...----------------------EPC.RMQD--------CHC----------
K9XVF5_STAC7/3-53-------------EACANGHTDG...----------------------SGC.GHQG--------CGC----------
K9SJ94_9CYAN/24-77-------------KACASGHVDGTND----------------------SHC.SDVG--------CEC----------
K9V6M1_9CYAN/3-53-------------PACAEGHKTM...----------------------KGC.ANSG--------CGC----------
B1LW41_METRJ/6-55-------------DDCADGHKDH...----------------------AGC.EHAG--------CAC----------
C5AVV7_METEA/6-55-------------DECAEGHPDH...----------------------AGC.DHAG--------CSC----------
K9VWZ1_9CYAN/3-53-------------QPCANGHADG...----------------------EGC.GHSG--------CGC----------
K9T9H0_9CYAN/20-70-------------EACADGHVNE...----------------------KGC.GHTG--------CTC----------
Q7U999_SYNPX/2-52-------------TSCSTGHANN...----------------------EPCHGEGS--------CGC----------

This alignment is coloured according to the ClustalX colouring scheme:

 
Glycine (G)
 
Proline (P)
 
Small or hydrophobic (C,A,V,L,I,M,F,W)
 
Hydroxyl or amine amino acids (S,T,N,Q)
 
Charged amino-acids (D,E,R,K)
 
Histidine or tyrosine (H,Y)

For UniProt-based alignments, we also add some additional mark-up to the alignments where appropriate. Active site information is shown as follows:

 
Active site (residue annotated in SwissProt as an active site)
 
Predicted active site (residue aligns in a Pfam alignment with a SwissProt active site)
 
Predicted active site (residue annotated in SwissProt as a potential active site)

Some UniProt sequences can be mapped to protein structures, in which case we also show the secondary structure definition. These lines are shown below the sequence to which they apply and are marked (SS). The meaning of each of the symbols is as follows:

C
Random coil
H
Alpha-helix
G
3(10) helix
I
Pi-helix
E
Hydrogen bonded beta-strand (extended strand)
B
Residue in isolated beta-bridge
T
H-bonded turn (3-turn, 4-turn, or 5-turn)
S
Bend (five-residue bend centered at residue i)
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