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3  structures 1019  species 0  interactions 8075  sequences 203  architectures

Clan: Peroxisome (CL0484)

Summary

Peroxisome-like domain Add an annotation

This superfamily combines peroxisome families and a family found at the C-terminus of metazoan phosphoribosyltransferases.

This clan contains 4 families and the total number of domains in the clan is 8075. The clan was built by P Coggill.

Members

This clan contains the following 4 member families:

DUF639 Pex24p PRT_C Reticulon

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Reticulon (PF02453) 3778 (46.8%) View
Pex24p (PF06398) 2021 (25.0%) View
PRT_C (PF08372) 1701 (21.1%) View
DUF639 (PF04842) 575 (7.1%) View
Total: 4 Total: 8075 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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