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106  structures 271  species 10  interactions 2991  sequences 544  architectures

Clan: B_GA (CL0598)

Summary

Bacterial immunoglobulin/albumin-binding domain superfamily Add an annotation

This clan contains 5 families and the total number of domains in the clan is 2991. The clan was built by A Bateman.

Members

This clan contains the following 5 member families:

B DUF1542 FIVAR GA GA-like

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
FIVAR (PF07554) 2021 (67.6%) View
DUF1542 (PF07564) 499 (16.7%) View
GA (PF01468) 397 (13.3%) View
GA-like (PF17573) 52 (1.7%) View
B (PF02216) 22 (0.7%) View
Total: 5 Total: 2991 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 10 interactions for this clan. More...

Interacting families
A B
B B
C1-set B
FIVAR FIVAR
GA
GA FIVAR
GA
GF_recep_IV B
Recep_L_domain B
Serum_albumin GA
V-set B

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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