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1459  structures 8897  species 0  interactions 17696  sequences 278  architectures

Clan: S15_NS1 (CL0600)

Summary

S15/NS1 RNA-binding domain superfamily Add an annotation

This clan contains 4 families and the total number of domains in the clan is 17696. The clan was built by A Bateman.

Members

This clan contains the following 4 member families:

Flu_B_NS1 Flu_NS1 Ribosomal_S15 WHEP-TRS

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Ribosomal_S15 (PF00312) 12015 (67.9%) View
WHEP-TRS (PF00458) 5653 (31.9%) View
Flu_NS1 (PF00600) 25 (0.1%) View
Flu_B_NS1 (PF02942) 3 (0.0%) View
Total: 4 Total: 17696 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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