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155  structures 25  species 12  interactions 42  sequences 7  architectures

Clan: Hexon (CL0611)

Summary

Hexon-like superfamily Add an annotation

This superfamily includes beta-sandwich viral coat proteins.

This clan contains 3 families and the total number of domains in the clan is 42. The clan was built by A Bateman.

Members

This clan contains the following 3 member families:

Adeno_hexon Capsid_NCLDV Phage_Capsid_P3

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Capsid_NCLDV (PF04451) 36 (85.7%) View
Adeno_hexon (PF01065) 5 (11.9%) View
Phage_Capsid_P3 (PF09018) 1 (2.4%) View
Total: 3 Total: 42 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 12 interactions for this clan. More...

Interacting families
A B
Adeno_hexon Adeno_hexon
Adeno_hexon_C
Adeno_Penton_B
Adeno_PIX
Adeno_PVIII
Hex_IIIa
Adeno_hexon_C Adeno_hexon
Capsid_NCLDV Capsid_NCLDV
Phage_Capsid_P3 DUF1859
DUF1970
Phage_Capsid_P3
Tecti-min-caps

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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