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82  structures 832  species 3  interactions 3800  sequences 68  architectures

Clan: AOC_barrel (CL0650)

Summary

AOC barrel-like superfamily Add an annotation

This superfamily was built based on the ECOD classification. According to SCOP this superfamily has a beta barrel topology with 8 strands.

This clan contains 4 families and the total number of domains in the clan is 3800. The clan was built by A Bateman.

Members

This clan contains the following 4 member families:

Allene_ox_cyc Dirigent DUF3224 DUF3237

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Dirigent (PF03018) 2202 (57.9%) View
DUF3237 (PF11578) 1151 (30.3%) View
DUF3224 (PF11528) 285 (7.5%) View
Allene_ox_cyc (PF06351) 162 (4.3%) View
Total: 4 Total: 3800 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 3 interactions for this clan. More...

Interacting families
A B
Allene_ox_cyc Allene_ox_cyc
DUF3224 DUF3224
DUF3237 DUF3237

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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