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77  structures 1831  species 8  interactions 3860  sequences 75  architectures

Clan: GH57_38_middle (CL0599)

Summary

Families 57/38 glycoside transferase middle domain superfamily Add an annotation

This clan contains 3 families and the total number of domains in the clan is 3860. The clan was built by A Bateman.

Members

This clan contains the following 3 member families:

Alpha-mann_mid DUF1925 DUF1957

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Alpha-mann_mid (PF09261) 3259 (84.4%) View
DUF1957 (PF09210) 484 (12.5%) View
DUF1925 (PF09094) 117 (3.0%) View
Total: 3 Total: 3860 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 8 interactions for this clan. More...

Interacting families
A B
Alpha-mann_mid Alpha-mann_mid
Glyco_hydro_38
Glyco_hydro_38C
DUF1925 DUF1926
Glyco_hydro_57
Glyco_hydro_38 Alpha-mann_mid
Glyco_hydro_57 DUF1925
DUF1957

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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