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22  structures 1056  species 6  interactions 2775  sequences 48  architectures

Clan: Mog1p_PsbP (CL0619)

Summary

Mog1p/PsbP-like superfamily Add an annotation

Members of this superfamily have a 7 stranded antiparallel beta sheet. The family includes the Mog1p protein and the PsbP proteins.

This clan contains 7 families and the total number of domains in the clan is 2775. The clan was built by A Bateman.

Literature references

  1. Ifuku K, Nakatsu T, Kato H, Sato F;, EMBO Rep. 2004;5:362-367.: Crystal structure of the PsbP protein of photosystem II from Nicotiana tabacum. PUBMED:15031714 EPMC:15031714

Members

This clan contains the following 7 member families:

DcrB DUF2020 DUF3805 Lpp-LpqN Mog1 PknH_C PsbP

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
PsbP (PF01789) 1210 (43.6%) View
Mog1 (PF04603) 638 (23.0%) View
PknH_C (PF14032) 382 (13.8%) View
DcrB (PF08786) 272 (9.8%) View
Lpp-LpqN (PF10738) 183 (6.6%) View
DUF2020 (PF09449) 53 (1.9%) View
DUF3805 (PF12712) 37 (1.3%) View
Total: 7 Total: 2775 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 6 interactions for this clan. More...

Interacting families
A B
DcrB DcrB
DUF2020 DUF2020
DUF3805 DUF3805
DUF3806
DUF3806 DUF3805
PsbP PsbP

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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