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736  structures 5432  species 39  interactions 58469  sequences 948  architectures

Clan: NTP_transf (CL0260)

Summary

Nucleotidyltransferase superfamily Add an annotation

This clan contains a diverse set of nucleotidyltransferase enzymes.

This clan contains 26 families and the total number of domains in the clan is 58469. The clan was built by A Bateman.

Members

This clan contains the following 26 member families:

AbiEii Adenyl_cycl_N Adenyl_transf Aminoglyc_resit DNA_pol3_alpha DNA_pol_B_palm DUF2204 DUF294 DZF GlnE GrpB LicD MdcG Mmp37 Nrap Nrap_D4 NTP_transf_2 NTP_transf_5 NTP_transf_6 NTP_transf_7 NTP_transf_8 Nuc-transf PolyA_pol Pox_polyA_pol RelA_SpoT RsfS

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
NTP_transf_2 (PF01909) 11285 (19.3%) View
RelA_SpoT (PF04607) 7644 (13.1%) View
DNA_pol3_alpha (PF07733) 7316 (12.5%) View
PolyA_pol (PF01743) 6553 (11.2%) View
RsfS (PF02410) 4471 (7.6%) View
GlnE (PF03710) 3783 (6.5%) View
AbiEii (PF08843) 3028 (5.2%) View
LicD (PF04991) 2046 (3.5%) View
DUF294 (PF03445) 1577 (2.7%) View
GrpB (PF04229) 1404 (2.4%) View
DNA_pol_B_palm (PF14792) 1374 (2.3%) View
NTP_transf_5 (PF14907) 1106 (1.9%) View
Mmp37 (PF09139) 930 (1.6%) View
DZF (PF07528) 912 (1.6%) View
continued
Pfam family Num. domains Alignment
Nuc-transf (PF10127) 882 (1.5%) View
Nrap_D4 (PF17405) 795 (1.4%) View
Nrap (PF03813) 726 (1.2%) View
NTP_transf_7 (PF07984) 632 (1.1%) View
NTP_transf_6 (PF06042) 540 (0.9%) View
Adenyl_transf (PF04439) 410 (0.7%) View
Adenyl_cycl_N (PF12633) 294 (0.5%) View
MdcG (PF10620) 242 (0.4%) View
NTP_transf_8 (PF12281) 213 (0.4%) View
DUF2204 (PF09970) 177 (0.3%) View
Aminoglyc_resit (PF10706) 117 (0.2%) View
Pox_polyA_pol (PF03296) 12 (0.0%) View
Total: 26 Total: 58469 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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