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1  structure 3  species 0  interactions 3  sequences 3  architectures

Clan: Paramyxovirin_C (CL0577)

Summary

C protein of Paramyovirinae families Add an annotation

C proteins of the Paramyxovirinae families are one of several genes transcribed from overlapping frames of the phosphoprotein (P) gene. The C proteins cluster in three groups, which are made up of measles, Nipah, and Sendai viruses. All C proteins have a similar organisation which consists of a variable, disordered N-terminus and a conserved, alpha-helical C-terminus [1].

This clan contains 3 families and the total number of domains in the clan is 3. The clan was built by P Coggill.

Literature references

  1. Lo MK, Sogaard TM, Karlin DG;, PLoS One. 2014;9:e90003.: Evolution and structural organization of the C proteins of paramyxovirinae. PUBMED:24587180 EPMC:24587180

Members

This clan contains the following 3 member families:

C_Hendra Paramyxo_C Paramyxo_NS_C

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
C_Hendra (PF16821) 1 (33.3%) View
Paramyxo_NS_C (PF02725) 1 (33.3%) View
Paramyxo_C (PF01692) 1 (33.3%) View
Total: 3 Total: 3 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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