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873  structures 5269  species 67  interactions 8497  sequences 96  architectures

Clan: S24e_L23_L15e (CL0652)

Summary

Ribosomal S24e, L23 and L15e superfamily Add an annotation

This clan contains 4 families and the total number of domains in the clan is 8497. The clan was built by A Bateman.

Members

This clan contains the following 4 member families:

Ribosomal_L15e Ribosomal_L41 Ribosomal_L5 Ribosomal_S7e

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Ribosomal_L5 (PF00281) 5876 (69.2%) View
Ribosomal_L15e (PF00827) 1320 (15.5%) View
Ribosomal_S7e (PF01251) 1126 (13.3%) View
Ribosomal_L41 (PF05162) 175 (2.1%) View
Total: 4 Total: 8497 Clan alignment
 

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 67 interactions for this clan. More...

Interacting families
A B
EFG_IV Ribosomal_S7e
KH_2 Ribosomal_S7e
Ribosomal_60s Ribosomal_L41
Ribosomal_L1 Ribosomal_L5
Ribosomal_L13 Ribosomal_L5
Ribosomal_L13e Ribosomal_L15e
Ribosomal_L15e Ribosomal_L16
Ribosomal_L3
Ribosomal_L34e
Ribosomal_L39
Ribosomal_L40e
Ribosomal_L41
Ribosomal_L44
Ribosomal_L6
Ribosomal_L7Ae
Ribosomal_L2 Ribosomal_L15e
Ribosomal_L31 Ribosomal_L5
Ribosomal_L32e Ribosomal_L41
Ribosomal_L5
Ribosomal_L34e Ribosomal_L15e
Ribosomal_L41
Ribosomal_L37ae Ribosomal_L5
Ribosomal_L37e Ribosomal_L15e
Ribosomal_L5
Ribosomal_L39 Ribosomal_L15e
Ribosomal_L41 Ribosomal_60s
Ribosomal_L18p
Ribosomal_L34e
Ribosomal_L36e
Ribosomal_L7Ae
Ribosomal_L44 Ribosomal_L15e
Ribosomal_L5 Ribos_L4_asso_C
Ribosomal_L13
Ribosomal_L18p
Ribosomal_L19e
Ribosomal_L22e
Ribosomal_L27A
Ribosomal_L30
Ribosomal_L30_N
Ribosomal_L31
Ribosomal_L34e
Ribosomal_L35Ae
Ribosomal_L5
Ribosomal_L5_C
Ribosomal_L6e
S4
Ribosomal_L5_C Ribosomal_L41
Ribosomal_L5
Ribosomal_L7Ae Ribosomal_L15e
Ribosomal_L41
Ribosomal_S7e
Ribosomal_S13 Ribosomal_S7e
Ribosomal_S13_N Ribosomal_S7e
Ribosomal_S19 Ribosomal_S7e
Ribosomal_S27 Ribosomal_S7e
Ribosomal_S30 Ribosomal_S7e
Ribosomal_S3_C Ribosomal_S7e
Ribosomal_S4 Ribosomal_L5
Ribosomal_S5 Ribosomal_S7e
Ribosomal_S7e HABP4_PAI-RBP1
Ribosomal_S13_N
Ribosomal_S15
Ribosomal_S8
Stm1_N
Ribosomal_S9 Ribosomal_S7e
S10_plectin Ribosomal_S7e
S4 Ribosomal_S7e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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