Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
88  structures 1104  species 13  interactions 15681  sequences 288  architectures

Clan: SNARE (CL0212)


SNARE-like superfamily Add an annotation

This clan includes part of the SNARE like superfamily.

This clan contains 7 families and the total number of domains in the clan is 15681. The clan was built by A Bateman.


This clan contains the following 7 member families:

Clat_adaptor_s Gryzun Gryzun-like Sedlin_N SRX Sybindin TRAPPC10

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

Loading domain graphics...


The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Clat_adaptor_s (PF01217) 9491 (60.5%) View
Sybindin (PF04099) 2269 (14.5%) View
Sedlin_N (PF04628) 2226 (14.2%) View
TRAPPC10 (PF12584) 900 (5.7%) View
Gryzun (PF07919) 476 (3.0%) View
Gryzun-like (PF12742) 288 (1.8%) View
SRX (PF09201) 31 (0.2%) View
Total: 7 Total: 15681 Clan alignment

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls


This tree shows the occurrence of the domains in this clan across different species. More...



There are 13 interactions for this clan. More...

Interacting families
Adap_comp_sub Clat_adaptor_s
Adaptin_N Clat_adaptor_s
Clat_adaptor_s Adap_comp_sub
Sedlin_N TRAPP
Sybindin Ras
Tcell_CD4_C Clat_adaptor_s
TRAPP Sybindin


For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

Loading structure mapping...