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184  structures 276  species 12  interactions 7500  sequences 159  architectures

Clan: TNF_receptor (CL0607)

Summary

TNF receptor-like superfamily Add an annotation

This clan contains 6 families and the total number of domains in the clan is 7500. The clan was built by A Bateman.

Members

This clan contains the following 6 member families:

BaffR-Tall_bind BCMA-Tall_bind NCD3G stn_TNFRSF12A TACI-CRD2 TNFR_c6

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
TNFR_c6 (PF00020) 3763 (50.2%) View
NCD3G (PF07562) 3471 (46.3%) View
TACI-CRD2 (PF09305) 100 (1.3%) View
BCMA-Tall_bind (PF09257) 59 (0.8%) View
BaffR-Tall_bind (PF09256) 58 (0.8%) View
stn_TNFRSF12A (PF12191) 49 (0.7%) View
Total: 6 Total: 7500 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 12 interactions for this clan. More...

Interacting families
A B
ANF_receptor NCD3G
BaffR-Tall_bind BaffR-Tall_bind
Ig_2 TNFR_c6
NGF TNFR_c6
TACI-CRD2 TACI-CRD2
TNF BaffR-Tall_bind
BCMA-Tall_bind
TACI-CRD2
TNFR_c6
TNFR_c6 NGF
TNF
TNFR_c6

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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