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68  structures 783  species 7  interactions 2583  sequences 42  architectures

Clan: Tropomyosin-lke (CL0452)

Summary

Tropomyosin-like superfamily Add an annotation

This clan contains 3 families and the total number of domains in the clan is 2583. The clan was built by P Coggill.

Members

This clan contains the following 3 member families:

CLZ Tropomyosin Tropomyosin_1

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Tropomyosin (PF00261) 1661 (64.3%) View
Tropomyosin_1 (PF12718) 514 (19.9%) View
CLZ (PF16526) 408 (15.8%) View
Total: 3 Total: 2583 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 7 interactions for this clan. More...

Interacting families
A B
bZIP_1 Tropomyosin
Scaffolding_pro Tropomyosin
Tropomyosin bZIP_1
Myosin_head
Scaffolding_pro
Tropomyosin
Troponin

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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