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18  structures 23  species 8  interactions 88  sequences 7  architectures

Clan: VCCI (CL0653)


VCCI superfamily superfamily Add an annotation

This superfamily is defined by SCOP based on the soluble secreted chemikine inhibitor from cowpox virus.

This clan contains 4 families and the total number of domains in the clan is 88. The clan was built by A Bateman.


This clan contains the following 4 member families:

DUF1406 Orthopox_35kD Pox_T4_C Pox_T4_N

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
DUF1406 (PF07190) 36 (40.9%) View
Orthopox_35kD (PF02250) 29 (33.0%) View
Pox_T4_N (PF04491) 13 (14.8%) View
Pox_T4_C (PF04490) 10 (11.4%) View
Total: 4 Total: 88 Clan alignment

Please note: Clan alignments can be very large and can cause problems for some browsers. Read the note above before viewing.

Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

Tree controls


This tree shows the occurrence of the domains in this clan across different species. More...



There are 8 interactions for this clan. More...

Interacting families
C1-set Pox_T4_C
DUF1406 DUF1406
MHC_I Pox_T4_C
Orthopox_35kD IL8
Pox_T4_N Pox_T4_C


For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

Loading structure mapping...