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242  structures 6082  species 6  interactions 21216  sequences 308  architectures

Clan: p35 (CL0672)

Summary

Baculovirus p35 protein superfamily Add an annotation

This superfamily includes the p35 protein from baculovirus as well as numerous N-terminal domains found in peptidases. This superfamily has a beta-sandwich structure.

This clan contains 5 families and the total number of domains in the clan is 21216. The clan was built by A Bateman.

Members

This clan contains the following 5 member families:

DUF3857 DUF4424 P35 Peptidase_M1_N Peptidase_M61_N

External database links

Domain organisation

Below is a listing of the unique domain organisations or architectures from this clan. More...

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Alignments

The table below shows the number of occurrences of each domain throughout the sequence database. More...

Pfam family Num. domains Alignment
Peptidase_M1_N (PF17900) 16734 (78.9%) View
DUF3857 (PF12969) 2147 (10.1%) View
Peptidase_M61_N (PF17899) 2093 (9.9%) View
DUF4424 (PF14415) 229 (1.1%) View
P35 (PF02331) 13 (0.1%) View
Total: 5 Total: 21216 Clan alignment
 

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Family relationships

This diagram shows the relationships between members of this clan. More...

Species distribution

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This tree shows the occurrence of the domains in this clan across different species. More...

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Interactions

There are 6 interactions for this clan. More...

Interacting families
A B
DUF3857 DUF3858
DUF3858 DUF3857
DUF4424 DUF4424
YARHG
P35 P35
Peptidase_C14

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between the Pfam families in this clan, the corresponding UniProt entries, and the region of the three-dimensional structures that are available for that sequence.

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