Summary: Serum albumin family
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Albumin Edit Wikipedia article
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|Serum albumin family|
The albumins (formed from Latin: albumen "(egg) white; dried egg white") are a family of globular proteins, the most common of which are the serum albumins. All the proteins of the albumin family are water-soluble, moderately soluble in concentrated salt solutions, and experience heat denaturation. Albumins are commonly found in blood plasma and differ from other blood proteins in that they are not glycosylated. Substances containing albumins, such as egg white, are called albuminoids.
Albumin binds to the cell surface receptor albondin.
Serum albumin is the main protein of human blood plasma. It binds water, cations (such as Ca2+, Na+ and K+), fatty acids, hormones, bilirubin, thyroxine (T4) and pharmaceuticals (including barbiturates): its main function is to regulate the colloidal osmotic pressure of blood. Alpha-fetoprotein (alpha-fetoglobulin) is a fetal plasma protein that binds various cations, fatty acids and bilirubin. Vitamin D-binding protein binds to vitamin D and its metabolites, as well as to fatty acids. The isoelectric point of albumin is 4.9.
The 3D structure of human serum albumin has been determined by X-ray crystallography to a resolution of 2.5 Å. Albumin is a 65–70 kDa protein.
Albumin comprises three homologous domains that assemble to form a heart-shaped protein. Each domain is a product of two subdomains that possess common structural motifs. The principal regions of ligand binding to human serum albumin are located in hydrophobic cavities in subdomains IIA and IIIA, which exhibit similar chemistry. Structurally, the serum albumins are similar, each domain containing five or six internal disulfide bonds, as shown schematically below:
+---+ +----+ +-----+ | | | | | | xxCxxxxxxxxxxxxxxxxCCxxCxxxxCxxxxxCCxxxCxxxxxxxxxCxxxxxxxxxxxxxxCCxxxxCxxxx | | | | | | +-----------------+ +------+ +---------------+ C = cysteine, x = any amino acid
Serum albumin is the most abundant blood plasma protein and is produced in the liver and forms a large proportion of all plasma protein. The human version is human serum albumin, and it normally constitutes about 50% of human plasma protein.
Serum albumins are important in regulating blood volume by maintaining the oncotic pressure (also known as colloid osmotic pressure) of the blood compartment. They also serve as carriers for molecules of low water solubility this way isolating their hydrophobic nature, including lipid-soluble hormones, bile salts, unconjugated bilirubin, free fatty acids (apoprotein), calcium, ions (transferrin), and some drugs like warfarin, phenobutazone, clofibrate & phenytoin. For this reason, it is sometimes referred as a molecular "taxi". Competition between drugs for albumin binding sites may cause drug interaction by increasing the free fraction of one of the drugs, thereby affecting potency.
Specific types include:
- human serum albumin
- bovine serum albumin (cattle serum albumin) or BSA, often used in medical and molecular biology labs.
Serum albumin levels
Normal range of human serum albumin in adults (> 3 y.o.) is 3.5 to 5 g/dL. For children less than three years of age, the normal range is broader, 2.9–5.5 g/dL.
Low albumin (hypoalbuminemia) may be caused by liver disease, nephrotic syndrome, burns, protein-losing enteropathy, malabsorption, malnutrition, late pregnancy, artefact, genetic variations and malignancy.
High albumin (hyperalbuminemia) is almost always caused by dehydration. In some cases of retinol (Vitamin A) deficiency, the albumin level can be elevated to high-normal values (e.g., 4.9 g/dL). This is because retinol causes cells to swell with water (this is also the reason too much Vitamin A is toxic). This swelling also likely occurs during treatment with 13-cis retinoic acid (isotretnoin), a pharmaceutical for treating severe acne, amongst other conditions. In lab experiments it has been shown that all-trans retinoic acid down regulates human albumin production
Other albumin types
- Note that the protein "albumin" is spelled with an "i", while "albumen" with an "e", is the white of an egg, which contains (among other things) several dozen types of albumin (with an "i"), mostly ovalbumin.
For patients with low blood volume, there is no evidence that albumin reduces mortality when compared with cheaper alternatives such as normal saline, or that albumin reduces mortality in patients with burns and low albumin levels. Therefore, the Cochrane Collaboration recommends that it not be used, except in clinical trials.[needs update]
Worldwide, certain traditional Chinese medicines contain wild bear bile, banned under CITES legislation. Dip sticks, similar to common pregnancy tests, have been developed to detect the presence of bear albumin in traditional medicine products, indicating that bear bile had been used in their creation.
- Cohn process (human serum albumin purification method)
- Serum albumin
- Sugio, S.; Kashima, A.; Mochizuki, S.; Noda, M.; Kobayashi, K. (1 June 1999). "Crystal structure of human serum albumin at 2.5 A resolution". Protein Engineering Design and Selection. 12 (6): 439–446. doi:10.1093/protein/12.6.439. PMID 10388840.
- He, Xiao Min; Carter, Daniel C. (16 July 1992). "Atomic structure and chemistry of human serum albumin". Nature. 358 (6383): 209–215. doi:10.1038/358209a0. PMID 1630489.
- Pliny The Elder. Historia Naturalis 28, 6, 18.
- Haefliger, Denise Nardelli; Moskaitis, John E.; Schoenberg, Daniel R.; Wahli, Walter (October 1989). "Amphibian albumins as members of the albumin, alpha-fetoprotein, vitamin D-binding protein multigene family". Journal of Molecular Evolution. 29 (4): 344–354. doi:10.1007/BF02103621. PMID 2481749.
- Schoentgen, Francçoise; Metz-Boutique, Marie-Hélène; Jollès, Jacqueline; Constans, Jacques; Jollès, Pierre (June 1986). "Complete amino acid sequence of human vitamin D-binding protein (group-specific component): evidence of a three-fold internal homology as in serum albumin and α-fetoprotein". Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology. 871 (2): 189–198. doi:10.1016/0167-4838(86)90173-1. PMID 2423133.
- Lichenstein, HS; Lyons, DE; Wurfel, MM; Johnson, DA; McGinley, MD; Leidli, JC; Trollinger, DB; Mayer, JP; Wright, SD; Zukowski, MM (8 July 1994). "Afamin is a new member of the albumin, alpha-fetoprotein, and vitamin D-binding protein gene family.". The Journal of Biological Chemistry. 269 (27): 18149–54. PMID 7517938.
- Farrugia, Albert (January 2010). "Albumin Usage in Clinical Medicine: Tradition or Therapeutic?". Transfusion Medicine Reviews. 24 (1): 53–63. doi:10.1016/j.tmrv.2009.09.005. PMID 19962575.
- Sugio, S.; Kashima, A.; Mochizuki, S.; Noda, M.; Kobayashi, K. (1 June 1999). "Crystal structure of human serum albumin at 2.5 A resolution". Protein Engineering Design and Selection. 12 (6): 439–446. doi:10.1093/protein/12.6.439. PMID 10388840.
- ""Normal Ranges for Common Laboratory Tests."". Archived from the original on 2013-01-14. Retrieved 2007-12-06. Rush University
- Pasantes-Morales, H; Wright, CE; Gaull, GE (December 1984). "Protective effect of taurine, zinc and tocopherol on retinol-induced damage in human lymphoblastoid cells.". The Journal of Nutrition. 114 (12): 2256–61. PMID 6502269.
- Masaki, T; Matsuura, T; Ohkawa, K; Miyamura, T; Okazaki, I; Watanabe, T; Suzuki, T (15 July 2006). "All-trans retinoic acid down-regulates human albumin gene expression through the induction of C/EBPbeta-LIP.". The Biochemical Journal. 397 (2): 345–53. doi:10.1042/BJ20051863. PMC . PMID 16608438.
- "Hemp Repairs Damaged DNA". High Times. 28 Aug 2014. Retrieved 10 Sep 2014.
- Albumin Reviewers, Alderson P, Bunn F, Li Wan Po A, Li L, Blackhall K, Roberts I, Schierhout G (5 October 2011). "Human albumin solution for resuscitation and volume expansion in critically ill patients.". The Cochrane database of systematic reviews (10): CD001208. doi:10.1002/14651858.CD001208.pub3. PMID 21975732.
- Lo, Andrea; Kripfgans, Oliver; Carson, Paul; Rothman, Edward; Fowlkes, J. (May 2007). "Acoustic droplet vaporization threshold: effects of pulse duration and contrast agent". IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control. 54 (5): 933–946. doi:10.1109/tuffc.2007.339.
- Peppin, McEwing, Webster, Rogers, Nicholls, Ogden 2008 'Development of a field test for the detection of illegal bear products' Endangered Forensics Research (9) http://www.int-res.com/articles/esr2009/9/n009p263.pdf
|Wikisource has the text of the 1911 Encyclopædia Britannica article Albumin.|
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Serum albumin family Provide feedback
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Internal database links
|Similarity to PfamA using HHSearch:||VitD-bind_III|
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR014760A number of serum transport proteins are known to be evolutionarily related, including albumin, alpha-fetoprotein, vitamin D-binding protein and afamin [PUBMED:2481749, PUBMED:2423133, PUBMED:7517938]. Albumin is the main protein of plasma; it binds water, cations (such as Ca2+, Na+ and K+), fatty acids, hormones, bilirubin and drugs - its main function is to regulate the colloidal osmotic pressure of blood. Alphafeto- protein (alpha-fetoglobulin) is a foetal plasma protein that binds various cations, fatty acids and bilirubin. Vitamin D-binding protein binds to vitamin D and its metabolites, as well as to fatty acids. The biological role of afamin (alpha-albumin) has not yet been characterised. The 3D structure of human serum albumin has been determined by X-ray crystallography to a resolution of 2.8A [PUBMED:1630489]. It comprises three homologous domains that assemble to form a heart-shaped molecule [PUBMED:1630489]. Each domain is a product of two subdomains that possess common structural motifs [PUBMED:1630489]. The principal regions of ligand binding to human serum albumin are located in hydrophobic cavities in subdomains IIA and IIIA, which exhibit similar chemistry. Structurally, the serum albumins are similar, each domain containing five or six internal disulphide bonds, as shown schematically below:
+---+ +----+ +-----+ | | | | | | xxCxxxxxxxxxxxxxxxxCCxxCxxxxCxxxxxCCxxxCxxxxxxxxxCxxxxxxxxxxxxxxCCxxxxCxxxx | | | | | | +-----------------+ +-----+ +---------------+
The mapping between Pfam and Gene Ontology is provided by InterPro. If you use this data please cite InterPro.
|Cellular component||extracellular space (GO:0005615)|
Below is a listing of the unique domain organisations or architectures in which this domain is found. More...
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|Number in seed:||176|
|Number in full:||633|
|Average length of the domain:||167.00 aa|
|Average identity of full alignment:||26 %|
|Average coverage of the sequence by the domain:||83.25 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 17690987 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||18|
|Download:||download the raw HMM for this family|
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The tree is built by looking at each sequence in the full alignment for the family. We take the name of the species given by UniProt and try to map that to the full taxonomic tree from NCBI. In some cases, the name chosen by UniProt does not map to any node in the NCBI tree, perhaps because the chosen name is listed as a synonym or a misspelling in the NCBI taxonomy.
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There are 8 interactions for this family. More...
We determine these interactions using iPfam, which considers the interactions between residues in three-dimensional protein structures and maps those interactions back to Pfam families. You can find more information about the iPfam algorithm in the journal article that accompanies the website.
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe group, to allow us to map Pfam domains onto UniProt sequences and three-dimensional protein structures. The table below shows the structures on which the Serum_albumin domain has been found. There are 490 instances of this domain found in the PDB. Note that there may be multiple copies of the domain in a single PDB structure, since many structures contain multiple copies of the same protein seqence.
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