Summary: Lepidopteran low molecular weight (30 kD) lipoprotein
Lepidopteran low molecular weight (30 kD) lipoprotein Provide feedback
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This tab holds annotation information from the InterPro database.
InterPro entry IPR004943This family includes Lepidopteran low molecular weight (30 kDa) lipoprotein, which is an extracellular protein of unknown function. Biosynthesis occurs in a stage-dependent fashion in the fat body.
|Cellular component||extracellular region (GO:0005576)|
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Curation and family details
|Seed source:||Pfam-B_4108 (release 6.5)|
|Number in seed:||6|
|Number in full:||84|
|Average length of the domain:||234.40 aa|
|Average identity of full alignment:||40 %|
|Average coverage of the sequence by the domain:||85.01 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||8|
|Download:||download the raw HMM for this family|
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For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe group, to allow us to map Pfam domains onto UniProt sequences and three-dimensional protein structures. The table below shows the structures on which the Lipoprotein_11 domain has been found. There are 2 instances of this domain found in the PDB. Note that there may be multiple copies of the domain in a single PDB structure, since many structures contain multiple copies of the same protein seqence.
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