# STOCKHOLM 1.0
#=GF ID   Lipoprotein_X
#=GF AC   PF03305.14
#=GF DE   Mycoplasma MG185/MG260 protein
#=GF AU   Mifsud W;0000-0002-9805-6461
#=GF SE   Pfam-B_4433 (release 6.5)
#=GF GA   25.00 25.00;
#=GF TC   27.80 26.80;
#=GF NC   23.80 22.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR004984;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Most of the aligned regions in this family are found towards the
#=GF CC   middle of the member proteins.
#=GF SQ   14
#=GS Y284_MYCPN/253-431    AC P75493.1
#=GS Y288_MYCPN/266-443    AC P75489.1
#=GS Y506_MYCPN/260-437    AC P75280.1
#=GS Y364_MYCPN/147-325    AC P75417.1
#=GS Y152_MYCPN/262-440    AC P75034.1
#=GS Q7NC49_MYCGA/250-437  AC Q7NC49.2
#=GS C5J5G9_MYCCR/214-396  AC C5J5G9.1
#=GS D5E6B5_MYCCM/226-419  AC D5E6B5.1
#=GS Q4A680_MYCS5/252-429  AC Q4A680.1
#=GS A5IYU2_MYCAP/221-395  AC A5IYU2.1
#=GS Y408_MYCPN/260-439    AC P75376.1
#=GS Y147_MYCPN/1-145      AC P75139.1
#=GS Y097_MYCPN/259-438    AC P75595.1
#=GS Y200_MYCPN/259-438    AC Q50288.1
Y284_MYCPN/253-431               SDKKIKESWGDY...EEVDGGLKGFTFKASIFDNWHDLLDFSTRAAKSFKK.IKDNNTKKGTDIQGILGVDSSANSLFTSVFAAGNGDYDNF..FY.KVANGR...A.DFSN.FKNRGS.SFQNLQSVFNDYKGLIDQNGLFVNK..GGSYSSN.FQKFHQLAYSISSTSGFYYSF.....AG.NSAK.RLKF.GDN.....SFIEYP
Y288_MYCPN/266-443               SDNKIKESWGEY...QEVDGGLKNFEFKASIFENWHDLLDFSTRVAKSFTN.VKGKDIKKGTDIQGVLGVDSTPNSLFTSVFAAGGGDYNNF..FY.KIENGR...A.DFSN.FKNKGT.SYQNLQKVFGDFKGLIDKNGIFVNK..GGSYSSN.FQKFHQLAYSISSTSGFFYSF.....AG.NSAK.RLKF.GD......NFIEFP
Y506_MYCPN/260-437               SDDQVKKSWGEY...QEVDGVLKNFEFKASIFENWHDLLDFSTRVAKSFKK.IHENSNKKGNDIQGILGVDSTPNSLFTSVFAAGGGDYNNF..FY.KIENGR...A.DFSN.FKNKGT.SYQNLQKVFGDFKGLIDKNGIFVNK..GGSYSSN.FQKFHQLAYSISSTSGFFYSF.....AG.KSAK.RLNF.GD......SFIEYP
Y364_MYCPN/147-325               SDEAIKKTWGDY...QKVENGLKGYTFKASVFENWHELLDFSARIARSFTN.IHTKETKKGTDIQGVLGIDSTPNALFTSVFAAGGGNYDNF..FY.KVQDGR...A.DFSN.FKNKET.SYQNLQKVFSDYKELIDKNGLFVNK..GGSYSSN.FQKFHQLAYSISSTSGFFYSF.....AG.NSAK.RLKF.DDG.....NFIEFP
Y152_MYCPN/262-440               SDQAIEKTWGKY...QEVEGGLKDYTFKASVFENWHDLLDFSNRVAKSFSN.INTNTNKKGTDIQGVLGIDSTPNSLFTSVFAAGGGNYDNF..FY.KVANGR...A.DFSN.FKNKGT.SYQNLQKVYGDYKGLIDSNGLFVNK..GGSYSSN.FQKFHQLAYSISSTSGFFYSF.....AG.ENSK.RLKF.DGG.....NFIEFP
Q7NC49_MYCGA/250-437             SSEFIKKLWGNY...TSVEGGLKGYTFSASALDTTTSLLDLSTRIAKSYPNNLKPVNDRKPASPQGVIGIDSPSNYLFNATFSQVNGNKDNF..MIRKTADNR...AYDYNALLSNQDN.RNQQLKNAFNALSPLINANGLFLNN..GGNYSSN.WGKYHQLGFFLSSTSGYYQSF.....VG.NSAAFNLVFKGVD..PSVGTYPFP
C5J5G9_MYCCR/214-396             DAEQIKKLWGKITKIPQDQGGFEGYEFTSDIFKYNYKLFDFALRVKKSFSK...ISSRGGKDSAQFVMGVDDSANLFYLSNFAKAGGKFDDF..LFGLKKDGS...QIDYSTLFKDKNSSRYKNAKDVFEHIKPLIETDTLFYSGRIGGDLNSNTLLNNHQLAFAIQTSSNYPKRF.....VA............NDKITTSLEISVD
D5E6B5_MYCCM/226-419             DRNYVVNLWGKVVEAEAKKS..KDYVISREIFNNGTTLIDFAVRAQNLFEN.....SKQNPKGSLHMLGIDDIAGFLATEVFAMTAKEKNDFKEFYIKLKEGN...FIDYKP.YEQKDTLAYKSLSKIAKTLLEAARQGAIYIGG..NGAYSST.FQVKHQIGFAIGSTAGHDHNIKAEAKLGFDYSIEKVEIQYNTIWTLTQLGEQG
Q4A680_MYCS5/252-429             DLEFIKQKWGNPVDNARTLVTSANLTISKDMFNKYEDLLNFAMVAQKLFTN......SANNQNDLHIVGMDFPTVTLKTSVFSIVGNDYSKSLEAPSKVAGTN...KVSYNS.LSTTGSPAQVAARTVYKKLKDAAGSGAVVLQP..LGQYSSG.KQIYHNFALSIGSTAGYLYNF.....ID.DTAASALRFTFDS...........
A5IYU2_MYCAP/221-395             DESEVKKLWGDFVEDQAT..TVKGLTIKQSTFENFRELLTFADIAQKSFKN......SAAQNSRLHILGVDDVSSVVQTLPYSLINKTSD....FFIKTGSKNRKTTVSYAS.FKNSNNPGVQNLSKVYDKFKSSLQTKSLTLLA..GGEYTSA.YQTKHEYAFGIGSTAGYRHNF.....LS............DDSKKTIFTVKDT
Y408_MYCPN/260-439               SDNEIKKTWGEYK..EEGNHTLKGYTFKASVFENWNELLDFSTRVANSFPDKIKNQASKKATELQGVFGVDSVSGALFSATFAAGGGDYDKF..FF.NVKNGR...G.NFRN.LLEKGS.SYNNLQKVFNDYKQLISSNGLYINK..GGAYSSN.FLKFHQLAFSVGSSSGYHFAF.....AG.ESAK.RLEF.GQ......KAIEYP
Y147_MYCPN/1-145                 .....................................MVDFATRVAKSFKDKVSGIDNKKGTDIQGVLGLDSTPNVLFASVFAAGGGSYDNF..FY.KVENGR...A.DFRN.FANKGT.SYKNLEKVYNDYKNLIGSNGLFASK..DGSYSSN.FEKFHQLAFYVGSSSGYNYAF.....AD.ETAK.RLKF.GD......SAIEYP
Y097_MYCPN/259-438               SDKKIEETWGTY...SEVDGGLKNYTFKADVFDTWHGLIDFSTRVAKSFKNKVSDISTKKGTDIQGVLGLDSTPNALFTSVFAAGDSNFDNF..FY.KVKDGR...A.DFSN.FNENGT.SYKNLEKVFNDYKKLTDSNGLFVNK..GGSYTSN.FQKFHQLAYSISSSSGYAYAF.....AG.ENSK.RLKF.NDD.....TFIEYP
Y200_MYCPN/259-438               SDTKIKESWGAY...QEVEGGLKGYQFKAIVFENWHDLIDFSTRVAKSFSK.VKDNSNKKGNEIQGVLGVDNSPNALLSSVFAAGNSDYNNF..FY.KVQNGR...A.DFSN.FNNKGS.SYKNLKNVFNDYKNLIAQNGLYVNK..GGSYSSN.FQKFHQLAYSISSTSGFAYSF.....AG.QNSK.RFKFTDDG.....TFVEYP
#=GC seq_cons                    S-ptIKcpWGcY...pcscusLKsasFKAslF-Nac-LLDFSsRlAKSFps.lps.ssKKus-lQGVLGlDSosNsLFTSVFAAGuGsYDNF..FY.KlpsGR...A.DFuN.FpNKGo.SYpNLpKVFsDaKsLIspNGLFlNK..GGuYSSN.FQKFHQLAaSIuSTSGahYuF.....AG.psuK.RLcF.sDs.....shIEaP
//