Summary: Bunyavirus glycoprotein G2
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Bunyavirus has three genomic segments: small (S), middle-sized (M), and large (L). The S segment encodes the nucleocapsid and a non-structural protein. The M segment codes for two glycoproteins, G1 and G2, and another non-structural protein (NSm). The L segment codes for an RNA polymerase. This family contains the G2 glycoprotein which interacts with the PF03557 G1 glycoprotein .
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR005168
Bunyavirus has three genomic segments: small (S), middle-sized (M), and large (L). The S segment encodes the nucleocapsid and a non-structural protein. The M segment codes for two glycoproteins, G1 and G2, and another non-structural protein (NSm). The L segment codes for an RNA polymerase. This entry represents the polyprotein region forming the G2 glycoprotein, which interacts with the INTERPRO G1 glycoprotein [PUBMED:7645217].
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Curation and family details
|Seed source:||Pfam-B_1048 (release 7.0)|
|Number in seed:||9|
|Number in full:||412|
|Average length of the domain:||233.50 aa|
|Average identity of full alignment:||57 %|
|Average coverage of the sequence by the domain:||29.30 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||8|
|Download:||download the raw HMM for this family|
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