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0  structures 146  species 0  interactions 421  sequences 6  architectures

Family: Vert_HS_TF (PF06546)

Summary: Vertebrate heat shock transcription factor

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This is the Wikipedia entry entitled "Heat shock factor". More...

Heat shock factor Edit Wikipedia article

HSF-type DNA-binding
Heat shock factor 3HTS.png
Structure of the dimeric DNA binding domain of the yeast heat shock factor (cyan and green) bound to DNA (brown) based on PDB: 3HTS​.
Identifiers
Symbol HSF_DNA-bind
Pfam PF00447
InterPro IPR000232
PROSITE PDOC00381
SCOP 1hks
SUPERFAMILY 1hks
Vertebrate heat shock transcription factor
Identifiers
Symbol Vert_HS_TF
Pfam PF06546
InterPro IPR010542

In molecular biology, heat shock factors (HSF), are the transcription factors that regulate the expression of the heat shock proteins.[1][2] A typical example is the heat shock factor of Drosophila melanogaster.[3]

Function

Heat shock factors (HSF) are transcriptional activators of heat shock genes.[3] These activators bind specifically to Heat Shock sequence Elements (HSE) throughout the genome[4] whose consensus-sequence is a tandem array of three oppositely oriented "AGAAN" motifs or a degenerate version thereof. Under non-stressed conditions, Drosophila HSF is a nuclear-localized unbound monomer, whereas heat shock activation results in trimerization and binding to the HSE.[5] The Heat Shock sequence Element is highly conserved from yeast to humans.[6]

Heat shock factor 1 (HSF-1) is the major regulator of heat shock protein transcription in eukaryotes. In the absence of cellular stress, HSF-1 is inhibited by association with heat shock proteins and is therefore not active. Cellular stresses, such as increased temperature, can cause proteins in the cell to misfold. Heat shock proteins bind to the misfolded proteins and dissociate from HSF-1. This allows HSF1 to form trimers and translocate to the cell nucleus and activate transcription.[7] Its function is not only critical to overcome the proteotoxic effects of thermal stress, but also needed for proper animal development and the overall survival of cancer cells.[8][9]

Structure

Each HSF monomer contains one C-terminal and three N-terminal leucine zipper repeats.[10] Point mutations in these regions result in disruption of cellular localisation, rendering the protein constitutively nuclear in humans.[5] Two sequences flanking the N-terminal zippers fit the consensus of a bi-partite nuclear localization signal (NLS). Interaction between the N- and C-terminal zippers may result in a structure that masks the NLS sequences: following activation of HSF, these may then be unmasked, resulting in relocalisation of the protein to the nucleus.[10] The DNA-binding component of HSF lies to the N-terminus of the first NLS region, and is referred to as the HSF domain.

Isoforms

Humans express the following heat shock factors:

gene protein
HSF1 heat shock transcription factor 1
HSF2 heat shock transcription factor 2
HSF2BP heat shock transcription factor 2 binding protein
HSF4 heat shock transcription factor 4
HSF5 heat shock transcription factor family member 5
HSFX1 heat shock transcription factor family, X linked 1
HSFX2 heat shock transcription factor family, X linked 2
HSFY1 heat shock transcription factor, Y-linked 1
HSFY2 heat shock transcription factor, Y-linked 2

References

  1. ^ Sorger PK (May 1991). "Heat shock factor and the heat shock response". Cell. 65 (3): 363–6. PMID 2018972. doi:10.1016/0092-8674(91)90452-5. 
  2. ^ Morimoto RI (March 1993). "Cells in stress: transcriptional activation of heat shock genes". Science. 259 (5100): 1409–10. Bibcode:1993Sci...259.1409M. PMID 8451637. doi:10.1126/science.8451637. 
  3. ^ a b Clos J, Westwood JT, Becker PB, Wilson S, Lambert K, Wu C (November 1990). "Molecular cloning and expression of a hexameric Drosophila heat shock factor subject to negative regulation". Cell. 63 (5): 1085–97. PMID 2257625. doi:10.1016/0092-8674(90)90511-C. 
  4. ^ Guertin, MJ; Lis, JT (Sep 2010). "Chromatin landscape dictates HSF binding to target DNA elements". PLoS Genetics. 6 (9): e1001114. PMC 2936546Freely accessible. PMID 20844575. doi:10.1371/journal.pgen.1001114. 
  5. ^ a b Rabindran SK, Giorgi G, Clos J, Wu C (August 1991). "Molecular cloning and expression of a human heat shock factor, HSF1". Proc. Natl. Acad. Sci. U.S.A. 88 (16): 6906–10. Bibcode:1991PNAS...88.6906R. PMC 52202Freely accessible. PMID 1871105. doi:10.1073/pnas.88.16.6906. 
  6. ^ Guertin, MJ; Petesch SJ; Zobeck KL; Min IM; Lis JT (2010). "Drosophila heat shock system as a general model to investigate transcriptional regulation". Cold Spring Harb. Symp. Quant. Biol. 75: 1–9. PMID 21467139. doi:10.1101/sqb.2010.75.039. 
  7. ^ Prahlad, V, Morimoto RI (Dec 2008). "Integrating the stress response: lessons for neurodegenerative diseases from C. elegans". Trends in Cell Biology. 19 (2): 52–61. PMC 4843516Freely accessible. PMID 19112021. doi:10.1016/j.tcb.2008.11.002. 
  8. ^ Salamanca, HH; Fuda N; Shi H; Lis JT (2011). "An RNA aptamer perturbs heat shock transcription factor activity in Drosophila melanogaster". Nucleic Acids Research. 39 (15): 6729–6740. PMC 3159435Freely accessible. PMID 21576228. doi:10.1093/nar/gkr206. 
  9. ^ Salamanca, HH; Antonyak MA; Cerione RA; Shi H; Lis JT (2014). "Inhibiting heat shock factor 1 in human cancer cells with a potent RNA aptamer". PLoS ONE. 9 (5): e96330. Bibcode:2014PLoSO...996330S. PMC 4011729Freely accessible. PMID 24800749. doi:10.1371/journal.pone.0096330. 
  10. ^ a b Schuetz TJ, Gallo GJ, Sheldon L, Tempst P, Kingston RE (August 1991). "Isolation of a cDNA for HSF2: evidence for two heat shock factor genes in humans". Proc. Natl. Acad. Sci. U.S.A. 88 (16): 6911–5. Bibcode:1991PNAS...88.6911S. PMC 52203Freely accessible. PMID 1871106. doi:10.1073/pnas.88.16.6911. 

This article incorporates text from the public domain Pfam and InterPro IPR000232

This page is based on a Wikipedia article. The text is available under the Creative Commons Attribution/Share-Alike License.

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Vertebrate heat shock transcription factor Provide feedback

This family represents the C-terminal region of vertebrate heat shock transcription factors. Heat shock transcription factors regulate the expression of heat shock proteins - a set of proteins that protect the cell from damage caused by stress and aid the cell's recovery after the removal of stress [1]. This C-terminal region is found with the N-terminal PF00447 and may contain a three-stranded coiled-coil trimerisation domain and a CE2 regulatory region, the latter of which is involved in sustained heat shock response [1].

Literature references

  1. Bulman AL, Hubl ST, Nelson HC; , J Biol Chem 2001;276:40254-40262.: The DNA-binding Domain of Yeast Heat Shock Transcription Factor Independently Regulates Both the N- and C-terminal Activation Domains. PUBMED:11509572 EPMC:11509572


This tab holds annotation information from the InterPro database.

InterPro entry IPR010542

This domain represents the C-terminal region of vertebrate heat shock transcription factors. Heat shock transcription factors regulate the expression of heat shock proteins - a set of proteins that protect the cell from damage caused by stress and aid the cell's recovery after the removal of stress [PUBMED:11509572]. This C-terminal region is found with the N-terminal INTERPRO, and may contain a three-stranded coiled-coil trimerisation domain and a CE2 regulatory region, the latter of which is involved in sustained heat shock response [PUBMED:11509572].

Gene Ontology

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(15)
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(421)
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(766)
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(1921)
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(52)
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(141)
RP55
(290)
RP75
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Key: ✓ available, x not generated, not available.

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  Seed
(15)
Full
(421)
Representative proteomes UniProt
(766)
NCBI
(1921)
Meta
(0)
RP15
(52)
RP35
(141)
RP55
(290)
RP75
(354)
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  Seed
(15)
Full
(421)
Representative proteomes UniProt
(766)
NCBI
(1921)
Meta
(0)
RP15
(52)
RP35
(141)
RP55
(290)
RP75
(354)
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Seed source: Pfam-B_16244 (release 10.0)
Previous IDs: none
Type: Family
Sequence Ontology: SO:0100021
Author: Vella Briffa B
Number in seed: 15
Number in full: 421
Average length of the domain: 229.70 aa
Average identity of full alignment: 27 %
Average coverage of the sequence by the domain: 50.16 %

HMM information View help on HMM parameters

HMM build commands:
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
Model details:
Parameter Sequence Domain
Gathering cut-off 20.5 20.5
Trusted cut-off 20.5 20.5
Noise cut-off 20.4 20.1
Model length: 271
Family (HMM) version: 11
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