Summary: Dicarboxylate carrier protein MatC N-terminus
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Dicarboxylate carrier protein MatC N-terminus Provide feedback
This family represents the N-terminal region of the bacterial dicarboxylate carrier protein MatC. The MatC protein is an integral membrane protein that could function as a malonate carrier .
An JH, Kim YS; , Eur J Biochem 1998;257:395-402.: A gene cluster encoding malonyl-CoA decarboxylase (MatA), malonyl-CoA synthetase (MatB) and a putative dicarboxylate carrier protein (MatC) in Rhizobium trifolii--cloning, sequencing, and expression of the enzymes in Escherichia coli. PUBMED:9826185 EPMC:9826185
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This superfamily of secondary carriers specific for cationic and anionic compounds, has been termed the ion transporter (IT) superfamily .
The clan contains the following 17 members:ABG_transport ArsB CitMHS DctM DcuA_DcuB DcuC DUF1504 DUF1646 DUF401 GntP_permease Lactate_perm MatC_N Na_H_antiport_2 Na_H_antiporter Na_sulph_symp NhaB SCFA_trans
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Curation and family details
|Seed source:||Pfam-B_16346 (release 10.0)|
|Number in seed:||5|
|Number in full:||578|
|Average length of the domain:||146.70 aa|
|Average identity of full alignment:||43 %|
|Average coverage of the sequence by the domain:||38.33 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||6|
|Download:||download the raw HMM for this family|
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