# STOCKHOLM 1.0 #=GF ID PSGP #=GF AC PF07276.12 #=GF DE Apopolysialoglycoprotein (PSGP) #=GF AU Moxon SJ;0000-0003-4644-1816 #=GF GA 17.4 17.4 #=GF NC 16.7 17.3 #=GF TC 17.6 22.4 #=GF SE Pfam-B_17916 (release 10.0) #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq #=GF TP Repeat #=GF RN [1] #=GF RM 3182867 #=GF RT Molecular cloning and characterization of cDNAs coding for #=GF RT apo-polysialoglycoprotein of rainbow trout eggs. Multiple mRNA #=GF RT species transcribed from multiple genes contain diverged numbers #=GF RT of exact 39-base (13-amino acid) repeats. #=GF RA Sorimachi H, Emori Y, Kawasaki H, Kitajima K, Inoue S, Suzuki K, #=GF RA Inoue Y; #=GF RL J Biol Chem 1988;263:17678-17684. #=GF DR INTERPRO; IPR009900; #=GF DR SO; 0001068; polypeptide_repeat; #=GF CC This family represents a series of 13 reside repeats found in #=GF CC the apopolysialoglycoprotein of Oncorhynchus mykiss (Rainbow #=GF CC trout) and Oncorhynchus masou (Cherry salmon). #=GF CC Polysialoglycoprotein (PSGP) of unfertilised eggs of rainbow #=GF CC trout consists of tandem repeats of a glycotridecapeptide, #=GF CC Asp-Asp-Ala-Thr*-Ser*-Glu-Ala-Ala-Thr*-Gly-Pro-Ser- Gly (* #=GF CC denotes the attachment site of a polysialoglycan chain). In #=GF CC response to egg activation, PSGP is discharged by exocytosis #=GF CC into the space between the vitelline envelope and the plasma #=GF CC membrane, i.e. the perivitelline space, where the 200-kDa PSGP #=GF CC molecules undergo rapid and dramatic depolymerisation by #=GF CC proteolysis into glycotridecapeptides [1]. #=GF SQ 62 A0A1S3R4D0.1/46-57 DDATSEAATGPS A0A1S3R4D0.1/58-69 DDATSEAATGPS A0A1S3R4D0.1/70-81 DDATSEAATGPS A0A1S3R4D0.1/82-93 DDATSEAATGPS A0A1S3R4D0.1/94-105 DDATSEAATGPS A0A1S3R4D0.1/106-117 DDATSEAATGPS A0A1S3R4D0.1/118-129 DDATSEAATGPS A0A1S3R4D0.1/130-141 DDATSEAATGPS A0A1S3R4D0.1/142-153 DDATSEAATGPS A0A1S3R4D0.1/154-165 DDATSEAATGPS A0A1S3R4D0.1/166-177 DDATSEAATGPS A0A1S3R4D0.1/178-189 DDATSEAATGPS A0A1S3R4D0.1/190-201 DDATSEAATGPS A0A1S3R4D0.1/202-213 DDATSEAATGPS A0A1S3R4D0.1/214-225 DDATSEAATGPS A0A1S3R4D0.1/226-237 DDATSEAATGPS A0A1S3R4D0.1/238-249 DDATSEAATGPS A0A1S3R4D0.1/250-261 DDATSEAATGPS A0A1S3R4D0.1/262-273 DDATSEAATGPS A0A1S3R4D0.1/274-285 DDATSEAATGPS A0A1S3R4D0.1/286-297 DDATSEAATGPS A0A1S3R4D0.1/298-309 DDATSEAATGPS A0A1S3R4D0.1/310-321 DDATSEAATGPS A0A1S3R4D0.1/322-333 DDATSEAATGPS A0A1S3R4D0.1/334-345 DDATSEAATGPS A0A1S3R016.1/24-35 DDATSEAATGPS A0A1S3R016.1/36-47 DDATSEAATGPS A0A1S3R016.1/48-59 DDATSEAATGPS A0A1S3R016.1/60-71 DDATSEAATGPS A0A1S3R016.1/72-83 DDATSEAATGPS A0A1S3R016.1/84-95 DDATSEAATGPS A0A1S3R016.1/96-107 DDATSEAATGPS A0A1S3R016.1/108-119 DDATSEAATGPS A0A1S3R016.1/120-131 DDATSEAATGPS A0A1S3R016.1/132-143 DDATSEAATGPS A0A1S3R016.1/144-155 DDATSEAATGPS A0A1S3R016.1/156-167 DDATSEAATGPS A0A1S3R016.1/168-179 DDATSEAATGPS A0A1S3R016.1/180-191 DDATSEAATGPS A0A1S3R016.1/192-203 DDATSEAATGPS A0A1S3R016.1/204-215 DDATSEAATGPS A0A1S3R016.1/216-227 DDATSEAATGPS A0A1S3R016.1/228-239 DDATSEAATGPS A0A1S3R016.1/240-251 DDATSEAATGPS A0A1S3R016.1/252-263 DDATSEAATGPS A0A1S3R016.1/264-275 DDATSEAATGPS A0A1S3R016.1/276-287 DDATSEAATGPS A0A1S3R016.1/288-299 DDATSEAATGPS A0A1S3R016.1/300-311 DDATSEAATGPS A0A1S3R016.1/312-323 DDATSEAATGPS A0A1S3QXD1.1/41-52 DDATSEAATGPS A0A1S3QXD1.1/53-64 DDATSEAATGPS A0A1S3QXD1.1/260-271 DDATSEAATGPS A0A1S3QXD1.1/272-283 DDATSEAATGPS A0A1S3QXD1.1/284-295 DDATSEAATGPS A0A1S3QXD1.1/296-307 DDATSEAATGPS A0A4W5K460.1/96-107 DDATSEAATGPS A0A4W5K460.1/108-119 DDATSEAATGPS A0A4W5K460.1/120-131 DDATSEAATGPS A0A4W5K460.1/132-143 DDATSEAATGPS A0A4W5K460.1/144-155 DDATSEAATGPS A0A4W5K460.1/156-167 DDATSEAATGPS //