# STOCKHOLM 1.0 #=GF ID PSGP #=GF AC PF07276.12 #=GF DE Apopolysialoglycoprotein (PSGP) #=GF AU Moxon SJ;0000-0003-4644-1816 #=GF SE Pfam-B_17916 (release 10.0) #=GF GA 17.40 17.40; #=GF TC 17.60 22.40; #=GF NC 16.70 17.30; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq #=GF TP Repeat #=GF RN [1] #=GF RM 3182867 #=GF RT Molecular cloning and characterization of cDNAs coding for #=GF RT apo-polysialoglycoprotein of rainbow trout eggs. Multiple mRNA #=GF RT species transcribed from multiple genes contain diverged numbers #=GF RT of exact 39-base (13-amino acid) repeats. #=GF RA Sorimachi H, Emori Y, Kawasaki H, Kitajima K, Inoue S, Suzuki K, #=GF RA Inoue Y; #=GF RL J Biol Chem 1988;263:17678-17684. #=GF DR INTERPRO; IPR009900; #=GF DR SO; 0001068; polypeptide_repeat; #=GF CC This family represents a series of 13 reside repeats found in #=GF CC the apopolysialoglycoprotein of Oncorhynchus mykiss (Rainbow #=GF CC trout) and Oncorhynchus masou (Cherry salmon). #=GF CC Polysialoglycoprotein (PSGP) of unfertilised eggs of rainbow #=GF CC trout consists of tandem repeats of a glycotridecapeptide, #=GF CC Asp-Asp-Ala-Thr*-Ser*-Glu-Ala-Ala-Thr*-Gly-Pro-Ser- Gly (* #=GF CC denotes the attachment site of a polysialoglycan chain). In #=GF CC response to egg activation, PSGP is discharged by exocytosis #=GF CC into the space between the vitelline envelope and the plasma #=GF CC membrane, i.e. the perivitelline space, where the 200-kDa PSGP #=GF CC molecules undergo rapid and dramatic depolymerisation by #=GF CC proteolysis into glycotridecapeptides [1]. #=GF SQ 140 Q91198.1/107-119 DDATSEAATGPSS Q91198.1/120-132 DDATSEAATGPSS Q91198.1/133-145 DDATSEAATGPSS Q91198.1/146-158 DDATSEAATGPSS Q91198.1/159-171 DDATSEAATGPSS Q91198.1/172-184 DDATSEAATGPSS Q91198.1/185-197 DDATSEAATGPSS Q91198.1/198-210 DDATSEAATGPSS Q91198.1/211-223 DDATSEAATGPSS Q91198.1/224-236 DDATSEAATGPSS Q91198.1/237-249 DDATSEAATGPSS Q91198.1/250-262 DDATSEAATGPSS Q91198.1/263-275 DDATSEAATGPSS Q91198.1/276-288 DDATSEAATGPSS Q91198.1/289-301 DDATSEAATGPSS Q91198.1/302-314 DDATSEAATGPSS Q91198.1/315-327 DDATSEAATGPSS Q91198.1/328-340 DDATSEAATGPSS Q91198.1/341-353 DDATSEAATGPSS Q91198.1/354-366 DDATSEAATGPSS Q91198.1/367-379 DDATSEAATGPSS Q91198.1/380-392 DDATSEAATGPSS Q91198.1/393-405 DDATSEAATGPSS Q91198.1/406-418 DDATSEAATGPSS Q91198.1/419-431 DDATSEAATGPSS Q91198.1/432-444 DDATSEAATGPSS Q91198.1/445-457 DDATSEAATGPSS Q91198.1/458-470 DDATSEAATGPSS Q91198.1/471-483 DDATSEAATGPSS Q91198.1/484-496 DDATSEAATGPSS Q91198.1/497-509 DDATSEAATGPSS Q91198.1/510-522 DDATSEAATGPSS Q91198.1/523-535 DDATSEAATGPSS Q91198.1/536-548 DDATSEAATGPSS Q91198.1/549-561 DDATSEAATGPSS Q91198.1/562-574 DDATSEAATGPSS Q91198.1/575-587 DDATSEAATGPSS Q91198.1/588-600 DDATSEAATGPSS Q91198.1/601-613 DDATSEAATGPSS P12027.2/108-120 DAATSEAATGPSG P12027.2/121-133 DDATSEAATGPSG P12027.2/134-146 DDATSEAATGPSG P12027.2/147-159 DDATSEAATGPSG P12027.2/160-172 DDATSEAATGPSG P12027.2/173-185 DDATSEAATGPSG P12027.2/186-198 DDATSEAATGPSG P12027.2/199-211 DDATSEAATGPSG P12027.2/212-224 DDATSEAATGPSG P12027.2/225-237 DDATSEAATGPSG P12027.2/238-250 DDATSEAATGPSG P12027.2/251-263 DDATSEAATGPSG P12027.2/264-276 DDATSEAATGPSG P12027.2/277-289 DDATSEAATGPSG P12027.2/290-302 DDATSEAATGPSG P12027.2/303-315 DDATSEAATGPSG P12027.2/316-328 DDATSEAATGPSG P12027.2/329-341 DDATSEAATGPSG P12027.2/342-354 DDATSEAATGPSG P12027.2/355-367 DDATSEAATGPSG P12027.2/368-380 DDATSEAATGPSG P12027.2/381-393 DDATSEAATGPSG P12027.2/394-406 DDATSEAATGPSG P12027.2/407-419 DDATSEAATGPSG P12027.2/420-432 DDATSEAATGPSG P12027.2/433-445 DDATSEAATGPSG P12027.2/446-458 DDATSEAATGPSG P12027.2/459-471 DDATSEAATGPSG P12027.2/472-484 DDATSEAATGPSG P12027.2/485-497 DDATSEAATGPSG P12027.2/498-510 DDATSEAATGPSG P12027.2/511-523 DDATSEAATGPSG P12027.2/524-536 DDATSEAATGPSG A0A1S3R4D0.1/46-57 DDATSEAATGPS- A0A1S3R4D0.1/58-69 DDATSEAATGPS- A0A1S3R4D0.1/70-81 DDATSEAATGPS- A0A1S3R4D0.1/82-93 DDATSEAATGPS- A0A1S3R4D0.1/94-105 DDATSEAATGPS- A0A1S3R4D0.1/106-117 DDATSEAATGPS- A0A1S3R4D0.1/118-129 DDATSEAATGPS- A0A1S3R4D0.1/130-141 DDATSEAATGPS- A0A1S3R4D0.1/142-153 DDATSEAATGPS- A0A1S3R4D0.1/154-165 DDATSEAATGPS- A0A1S3R4D0.1/166-177 DDATSEAATGPS- A0A1S3R4D0.1/178-189 DDATSEAATGPS- A0A1S3R4D0.1/190-201 DDATSEAATGPS- A0A1S3R4D0.1/202-213 DDATSEAATGPS- A0A1S3R4D0.1/214-225 DDATSEAATGPS- A0A1S3R4D0.1/226-237 DDATSEAATGPS- A0A1S3R4D0.1/238-249 DDATSEAATGPS- A0A1S3R4D0.1/250-261 DDATSEAATGPS- A0A1S3R4D0.1/262-273 DDATSEAATGPS- A0A1S3R4D0.1/274-285 DDATSEAATGPS- A0A1S3R4D0.1/286-297 DDATSEAATGPS- A0A1S3R4D0.1/298-309 DDATSEAATGPS- A0A1S3R4D0.1/310-321 DDATSEAATGPS- A0A1S3R4D0.1/322-333 DDATSEAATGPS- A0A1S3R4D0.1/334-345 DDATSEAATGPS- A0A1S3R016.1/24-35 DDATSEAATGPS- A0A1S3R016.1/36-47 DDATSEAATGPS- A0A1S3R016.1/48-59 DDATSEAATGPS- A0A1S3R016.1/60-71 DDATSEAATGPS- A0A1S3R016.1/72-83 DDATSEAATGPS- A0A1S3R016.1/84-95 DDATSEAATGPS- A0A1S3R016.1/96-107 DDATSEAATGPS- A0A1S3R016.1/108-119 DDATSEAATGPS- A0A1S3R016.1/120-131 DDATSEAATGPS- A0A1S3R016.1/132-143 DDATSEAATGPS- A0A1S3R016.1/144-155 DDATSEAATGPS- A0A1S3R016.1/156-167 DDATSEAATGPS- A0A1S3R016.1/168-179 DDATSEAATGPS- A0A1S3R016.1/180-191 DDATSEAATGPS- A0A1S3R016.1/192-203 DDATSEAATGPS- A0A1S3R016.1/204-215 DDATSEAATGPS- A0A1S3R016.1/216-227 DDATSEAATGPS- A0A1S3R016.1/228-239 DDATSEAATGPS- A0A1S3R016.1/240-251 DDATSEAATGPS- A0A1S3R016.1/252-263 DDATSEAATGPS- A0A1S3R016.1/264-275 DDATSEAATGPS- A0A1S3R016.1/276-287 DDATSEAATGPS- A0A1S3R016.1/288-299 DDATSEAATGPS- A0A1S3R016.1/300-311 DDATSEAATGPS- A0A1S3R016.1/312-323 DDATSEAATGPS- A0A1S3QXD1.1/41-52 DDATSEAATGPS- A0A1S3QXD1.1/53-64 DDATSEAATGPS- A0A1S3QXD1.1/260-271 DDATSEAATGPS- A0A1S3QXD1.1/272-283 DDATSEAATGPS- A0A1S3QXD1.1/284-295 DDATSEAATGPS- A0A1S3QXD1.1/296-307 DDATSEAATGPS- A0A4W5K460.1/96-107 DDATSEAATGPS- A0A4W5K460.1/108-119 DDATSEAATGPS- A0A4W5K460.1/120-131 DDATSEAATGPS- A0A4W5K460.1/132-143 DDATSEAATGPS- A0A4W5K460.1/144-155 DDATSEAATGPS- A0A4W5K460.1/156-167 DDATSEAATGPS- Q7LZ41.1/1-12 DDATSEAATGPS- Q7LZ42.1/1-13 DDATSDAATGPSG A0A3D1ILV8.1/5-14 -DSTSEAATGP-- A0A3Y5LH98.1/7-17 -AATSVAATGPS- A0A441VEA1.1/9-20 DAATKERATGPS- A0A1M3NF13.1/52-62 DDAASEAATGP-- //