Summary: Histone H1-like nucleoprotein HC2
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Histone H1-like nucleoprotein HC2 Provide feedback
This family contains the bacterial histone H1-like nucleoprotein HC2 (approximately 200 residues long), which seems to be found mostly in Chlamydia. HC2 functions in DNA condensation, although it has been suggested that it also has other roles .
Pedersen LB, Birkelund S, Christiansen G; , Mol Microbiol 1996;20:295-311.: Purification of recombinant Chlamydia trachomatis histone H1-like protein Hc2, and comparative functional analysis of Hc2 and Hc1. PUBMED:8733229 EPMC:8733229
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR009970
This family contains the bacterial histone H1-like nucleoprotein HC2 (approximately 200 residues long), which seems to be found mostly in Chlamydia. HC2 functions in DNA condensation, although it has been suggested that it also has other roles [PUBMED:8733229].
The mapping between Pfam and Gene Ontology is provided by InterPro. If you use this data please cite InterPro.
|Molecular function||DNA binding (GO:0003677)|
|Biological process||chromosome condensation (GO:0030261)|
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Curation and family details
|Seed source:||Pfam-B_20179 (release 10.0)|
|Author:||Vella Briffa B|
|Number in seed:||8|
|Number in full:||638|
|Average length of the domain:||155.10 aa|
|Average identity of full alignment:||47 %|
|Average coverage of the sequence by the domain:||68.79 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||7|
|Download:||download the raw HMM for this family|
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