Summary: Bovine Lentivirus VIF protein
Bovine Lentivirus VIF protein Provide feedback
This family consists of several Lentivirus viral infectivity factor (VIF) proteins. VIF is known to be essential for ability of cell-free virus preparation to infect cells . Members of this family are specific to Bovine immunodeficiency virus (BIV) and Jembrana disease virus which also infects cattle.
Ramakrishnan S, Sukhaswami MB, Patil KM, Eswaran C; , J Biomol Struct Dyn 1997;15:605-609.: Sequence data analysis reveals a relationship between LSR2, the recombinant fusion protein mimicing M.Leprae and VIF of bovine immunodeficiency virus (BIV). PUBMED:9440006 EPMC:9440006
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This tab holds annotation information from the InterPro database.
InterPro entry IPR009979
This family consists of several Lentivirus viral infectivity factor (VIF) proteins. VIF is known to be essential for ability of cell-free virus preparation to infect cells [PUBMED:9440006]. Members of this family are specific to Bovine immunodeficiency virus (BIV) and Jembrana disease virus (JDV) which also infects cattle.
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Curation and family details
|Seed source:||Pfam-B_21067 (release 10.0)|
|Number in seed:||2|
|Number in full:||22|
|Average length of the domain:||133.50 aa|
|Average identity of full alignment:||40 %|
|Average coverage of the sequence by the domain:||59.32 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||7|
|Download:||download the raw HMM for this family|
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