Summary: Coat F domain
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Coat F domain Provide feedback
The Coat F proteins, which contribute to the Bacillales spore coat. It occurs multiple times in the genomes it is found in.
Internal database links
|Similarity to PfamA using HHSearch:||DUF3231|
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR012851
The Coat F proteins contribute to the Bacillales spore coat. They occur multiple times in the genomes in which they are found. Bacillus subtilis endospore protein coats protect them and may play a role in their germination [PUBMED:18723620]. Spore coat protein F, on the outer surface of the endospore, is one of a suite of proteins that could be used to differentiate between members of the Bacillus genus [PUBMED:14711677].
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The members of this clan all share a distinctive four helical bundle. The four helices are arranged antiparallel with a left-handed twist. This helical bundle is distinguished from others by the long connection between the second and third helices. Some of the members contain a Fe or Mn dimer at the centre of the helical bundle. The ferritin fold was first described by Murzin AG and Chothia C, Cur Opin Struc Biol 1992, 2:895-903.
The clan contains the following 19 members:Coat_F COQ7 DUF2202 DUF2383 DUF305 DUF4142 DUF4439 DUF892 FA_desaturase_2 Ferritin Ferritin-like Ferritin_2 MiaE MiaE_2 Mn_catalase PaaA_PaaC Phenol_Hydrox Ribonuc_red_sm Rubrerythrin
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Curation and family details
|Seed source:||Yeats C|
|Number in seed:||65|
|Number in full:||780|
|Average length of the domain:||63.60 aa|
|Average identity of full alignment:||24 %|
|Average coverage of the sequence by the domain:||50.09 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||7|
|Download:||download the raw HMM for this family|
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