# STOCKHOLM 1.0 #=GF ID PROCT #=GF AC PF08084.12 #=GF DE PROCT (NUC072) domain #=GF AU Staub E;0000-0002-5039-3098 #=GF AU Bateman A;0000-0002-6982-4660 #=GF SE Staub E #=GF GA 19.50 19.50; #=GF TC 19.60 21.30; #=GF NC 19.30 18.40; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch --cut_ga HMM metaseq #=GF TP Domain #=GF RN [1] #=GF RM 15112237 #=GF RT Insights into the evolution of the nucleolus by an analysis of #=GF RT its protein domain repertoire. #=GF RA Staub E, Fiziev P, Rosenthal A, Hinzmann B; #=GF RL Bioessays 2004;26:567-581. #=GF DR INTERPRO; IPR012984; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC The PROCT domain is the C-terminal domain in pre-mRNA splicing #=GF CC factors of PRO8 family [1]. #=GF SQ 4 #=GS ECN84616.1/45-163 DE [subseq from] hypothetical protein GOS_4305019 [marine metagenome] #=GS EBQ29406.1/187-274 DE [subseq from] hypothetical protein GOS_7772901 [marine metagenome] #=GS ECO91455.1/257-315 DE [subseq from] hypothetical protein GOS_3579982 [marine metagenome] #=GS ECB91148.1/239-271 DE [subseq from] hypothetical protein GOS_6002531 [marine metagenome] ECN84616.1/45-163 IIMSCAFTPGSCSLAAYRLTEAGHEWSLQNDSK-APNPPGYTSALFERSQLILSDRYDGFFLTPMIGGWNYNFRGVELSVGMEYELVRNVPENFYDEQHRPNHFLNFAHSdlTAiDENLE------ EBQ29406.1/187-274 IVLTCSFTPGSCSLTAYKLTPTGYEWGRSNKDTNSANPQGYSPGHYEKVQMLLSDRFLGYYMVPDGGSWNYNFQGVKHSPGMKYALKL----------------------..--.----------- ECO91455.1/257-315 IIMSCAFTPGSCSLAAYRLTEAGHEWSLQNDSK-APNPPGYTSALFERSQLILSDKYDGF--------------------------------------------------..--.----------- ECB91148.1/239-271 IVLTCSFTPGSCSLTAYKLTPTGYEWGRANKDT-----------------------------------------------------------------------------..--.----------- #=GC PP_cons 789*************************99887*99***********************9*************************999*******************998..33.44444...... #=GC RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..xx.xxxxxxxxxxx //