# STOCKHOLM 1.0
#=GF ID   FDF
#=GF AC   PF09532.11
#=GF DE   FDF domain
#=GF PI   DFDF;
#=GF AU   Anantharaman V;0000-0001-8395-0009
#=GF SE   Anantharaman V
#=GF GA   26.10 26.10;
#=GF TC   26.10 26.10;
#=GF NC   26.00 26.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cut_ga HMM metaseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   15257761
#=GF RT   Novel conserved domains in proteins with predicted roles in
#=GF RT   eukaryotic cell-cycle regulation, decapping and RNA stability.
#=GF RA   Anantharaman V, Aravind L;
#=GF RL   BMC Genomics. 2004;5:45.
#=GF RN   [2]
#=GF RM   15225602
#=GF RT   Novel Sm-like proteins with long C-terminal tails and associated
#=GF RT   methyltransferases. 
#=GF RA   Albrecht M, Lengauer T; 
#=GF RL   FEBS Lett 2004;569:18-26.
#=GF RN   [3]
#=GF RM   19285948
#=GF RT   Structural basis for the mutually exclusive anchoring of P body
#=GF RT   components EDC3 and Tral to the DEAD box protein DDX6/Me31B.
#=GF RA   Tritschler F, Braun JE, Eulalio A, Truffault V, Izaurralde E,
#=GF RA   Weichenrieder O;
#=GF RL   Mol Cell. 2009;33:661-668.
#=GF DR   INTERPRO; IPR019050;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   The FDF domain, so called because of the conserved FDF at its  N
#=GF CC   termini, is an entirely alpha-helical domain with multiple
#=GF CC   exposed hydrophilic loops [1]. It is found at the C terminus of
#=GF CC   Scd6p-like SM domains [1][2]. It is also found with other
#=GF CC   divergent Sm domains and in proteins such as Dcp3p and FLJ21128,
#=GF CC   where it is found N terminal to the YjeF-N domain, a novel
#=GF CC   Rossmann fold domain [1].
#=GF SQ   1
#=GS EBL22089.1/253-361 DE [subseq from] hypothetical protein GOS_8605195 [marine metagenome]
EBL22089.1/253-361         ---KREFDFQKQLEGFNKADFIQEKLKSLRMNNGAGNN-DNgntngtsnntsgaeEGHLTAADILNQATGPKYDKKSSFFDDLSSDATERLNNR----NAYDRNAQRQKNLDTFGAE-
#=GC PP_cons               ...679*********************99887644432.23..............44445666666778889****************999988....44567788888889**986.
#=GC RF                    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx..............xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
//