# STOCKHOLM 1.0 #=GF ID zf-4CXXC_R1 #=GF AC PF10497.10 #=GF DE Zinc-finger domain of monoamine-oxidase A repressor R1 #=GF AU Buljan M;0000-0001-8101-8197 #=GF AU Coggill P;0000-0001-5731-1588 #=GF SE TreeFam_TF101076 #=GF GA 22.70 22.70; #=GF TC 22.70 22.70; #=GF NC 22.60 22.60; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 15654081 #=GF RT R1, a novel repressor of the human monoamine oxidase A. #=GF RA Chen K, Ou XM, Chen G, Choi SH, Shih JC; #=GF RL J Biol Chem. 2005;280:11552-11559. #=GF DR INTERPRO; IPR018866; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC R1 is a transcription factor repressor that inhibits monoamine #=GF CC oxidase A gene expression. This domain is a four-CXXC zinc #=GF CC finger putative DNA-binding domain found at the C-terminal end #=GF CC of R1. The domain carries 12 cysteines of which four pairs are #=GF CC of the CXXC type [1]. #=GF SQ 53 #=GS I1PU72_ORYGL/131-231 AC I1PU72.1 #=GS F4HRU0_ARATH/19-118 AC F4HRU0.2 #=GS M4EYW7_BRARP/38-137 AC M4EYW7.1 #=GS D7KVP2_ARALL/25-124 AC D7KVP2.1 #=GS D8SNA1_SELML/498-595 AC D8SNA1.1 #=GS E1ZCU5_CHLVA/62-171 AC E1ZCU5.1 #=GS R4X7E6_TAPDE/105-202 AC R4X7E6.1 #=GS D8SGJ4_SELML/65-168 AC D8SGJ4.1 #=GS C1FIL3_MICCC/124-265 AC C1FIL3.1 #=GS C1MKL9_MICPC/188-297 AC C1MKL9.1 #=GS E1Z3B9_CHLVA/3-112 AC E1Z3B9.1 #=GS C1E455_MICCC/151-248 AC C1E455.1 #=GS A4S6V2_OSTLU/126-223 AC A4S6V2.1 #=GS D8T998_SELML/130-226 AC D8T998.1 #=GS E1Z413_CHLVA/509-642 AC E1Z413.1 #=GS M1ATV2_SOLTU/148-244 AC M1ATV2.1 #=GS B9HRU9_POPTR/177-273 AC B9HRU9.2 #=GS I1JEY9_SOYBN/160-256 AC I1JEY9.2 #=GS A9S1H9_PHYPA/152-248 AC A9S1H9.1 #=GS U5DBC0_AMBTC/161-257 AC U5DBC0.1 #=GS I1LHI6_SOYBN/158-254 AC I1LHI6.1 #=GS Q1PF11_ARATH/157-253 AC Q1PF11.1 #=GS Q0WPT6_ARATH/175-272 AC Q0WPT6.1 #=GS B6THY7_MAIZE/184-280 AC B6THY7.1 #=GS C1ECT7_MICCC/202-303 AC C1ECT7.1 #=GS A4S3X2_OSTLU/129-230 AC A4S3X2.1 #=GS D8UAL2_VOLCA/147-268 AC D8UAL2.1 #=GS I1PEY8_ORYGL/164-286 AC I1PEY8.1 #=GS M0T622_MUSAM/129-257 AC M0T622.1 #=GS M1B480_SOLTU/95-212 AC M1B480.1 #=GS F7ATF3_CIOIN/177-275 AC F7ATF3.2 #=GS L9KN02_TUPCH/513-606 AC L9KN02.1 #=GS H3CNN5_TETNG/185-283 AC H3CNN5.1 #=GS B2RZ03_XENTR/201-299 AC B2RZ03.1 #=GS G5AMI4_HETGA/419-517 AC G5AMI4.1 #=GS W5KB70_ASTMX/350-448 AC W5KB70.2 #=GS I3JXT5_ORENI/281-379 AC I3JXT5.1 #=GS C3Y254_BRAFL/334-432 AC C3Y254.1 #=GS W4YRL7_STRPU/100-198 AC W4YRL7.1 #=GS A7SQU1_NEMVE/57-155 AC A7SQU1.1 #=GS K7J8Q4_NASVI/215-313 AC K7J8Q4.1 #=GS A0A088AEX3_APIME/192-290 AC A0A088AEX3.1 #=GS J9K949_ACYPI/200-295 AC J9K949.1 #=GS J9LIE7_ACYPI/165-263 AC J9LIE7.1 #=GS D7SIV9_VITVI/39-138 AC D7SIV9.1 #=GS W1PNU6_AMBTC/43-142 AC W1PNU6.1 #=GS K7MWJ4_SOYBN/39-138 AC K7MWJ4.1 #=GS F6GVR0_VITVI/62-160 AC F6GVR0.1 #=GS F6GVQ3_VITVI/59-158 AC F6GVQ3.1 #=GS M0TRH9_MUSAM/358-457 AC M0TRH9.1 #=GS B9RSM2_RICCO/44-143 AC B9RSM2.1 #=GS D7MJW1_ARALL/24-123 AC D7MJW1.1 #=GS M4EMD1_BRARP/20-115 AC M4EMD1.1 I1PU72_ORYGL/131-231 YDPENGKTCHQCRQKTMDFAA.................................SCHKIK...........KNNKQCT........................................IQYCRKCLFNRYGQEAEKVAND.GT.WTCPKCKD...........ICN......CS..FCMK................KKGLPPTGILAHAAKASGCASVHHLL F4HRU0_ARATH/19-118 YDSQNGKSCHQCRQKTLDFAA.................................PCKAMR............RKKLCP........................................IKFCYKCLSIRYGENAEEVAKL.DD.WICPLCRG...........ICI......CS..VCRK................AQGLEPTGILAHEAKARGYSSVYALL M4EYW7_BRARP/38-137 YDSSNGKCCHQCRQKTMDFVA.................................SCKAVK............NNKQCK........................................LNICHTCLLNRYGERAQEVATL.SD.WHCPKCRG...........LCN......CS..FCRK................EKGLEPTGILSHRAKASGLSSVSELL D7KVP2_ARALL/25-124 YDSSNGKTCHQCRQKTMDFVA.................................SCKAMK............KDKQCT........................................INFCHKCLINRYGENAEEVAKL.DD.WMCPQCRG...........ICN......CS..FCRK................KRGLNPTGILAHKAKASGLASVSMLL D8SNA1_SELML/498-595 YDSDNGTSCHQCRQKTLGLMA.................................SCKSE..............ERSCS........................................LNFCSKCLQNRYGEDVAIVNGL.NA.WTCPRCRG...........ICN......CS..YCMK................KKGCSPTGMVSHLAKSIGCASVAEFL E1ZCU5_CHLVA/62-171 YDSENGTTCHQCRQKTAETKA.................................KC..................ARCT........................................LHFCPKCLENRYQERVEEVNAR.PG.WSCPRCRG...........DCN......CS..NCRKASGAERWRWLSLVEQHKAGKEATGQLAGIAKKAGFGSVKDLL R4X7E6_TAPDE/105-202 YDPVLGTSCHQCRQKTTDAKR.................................TCTL................PNCF........................................LKICFRCLPNRYGTSVHRDRDDGDDDWQCPKCRG...........LCN......CS..LCRK................ASGRAPTGILAPVAFKLGFDGVAAML D8SGJ4_SELML/65-168 YDSTNGITCHWCRQKTVEDKV.................................CC..................SRCP........................................ISFCGSCLANRHGEILDEQMEE.GVRWVCPKCRGGCGP..GCVDSCCN......CG..PCRK................AQGLAPTGVLKHGAAKSGFNNAHDYL C1FIL3_MICCC/124-265 YDSELGTTCHWCRQKTVETHVTVRRPDQTHPIDRTVIPPPPLTPAHPPPLIRHAQCTA................EGCGR...................................GRMPVSFCGMCLRNRHGEDIDAAVAS.GA.WVCPRCRGSCGE...GCVTCCN......CG..PCRK................AKGLAPTHQVINLARASGFDNVHDYL C1MKL9_MICPC/188-297 YDSELGVTCHWCRQKTVEPHV.................................FCTD................DACGR..................................GRSNPLAFCGMCLRNRHGEDIEDAIAS.GV.WKCPKCRGSCGD...GCVACCN......CG..PCRK................ANGLAPTHQVVNLARARGFDNAHDYL E1Z3B9_CHLVA/3-112 YDSKYGVTCHWCRQKTLEEHV.................................TCSH................PDCGD..................................GRRLAVSFCKLCLRNRQGEDIAQAEAS.GK.WVCPRCRGSCGD...GCASCCN......CG..PCRK................ALGLAPTHQIINQARGAGFDNVHDFL C1E455_MICCC/151-248 YDPVRGATCHQCRQKTVCKHT.................................SC..................GGCG.....................................ELRGQFCGDCLWMRYGEHVDEANDA.GDAWRCPSCRD...........LCN......CS..FCRQ................RKGLPPTGTLYRRAIKAGFASVAHYL A4S6V2_OSTLU/126-223 YDPVNGQCCHQCRQKTKGLRT.................................SC..................AGCE.....................................MMRGVYCGDCLYMRQGLNIREVIAR.GDAWRCPSCLD...........ICN......CS..FCRT................KKGYPPTGTMYRRSLAMGYDSVAHYL D8T998_SELML/130-226 YDAFSGKTCHQCRQKTVGLRT.................................FC..................YECE.....................................SLHGQFCGDCLFMRYGENVKEALAD.KS.WKCPVCRG...........ICN......CS..ICRT................RKGWAPTGNLYRTALRMGYKSVAHFL E1Z413_CHLVA/509-642 YDSDKGLSCHQCRQKTLGQRT.................................SC..................SRCKSGVVRAGHTRLQGAWLAALESLAICSLAANYSRLFRIVAQGVLCGDCLFARYGEHVEEAAAN.KA.WVCPCCRD...........LCN......CS..RHRK................LRKWEATGQLHRSVKSRGYLSVAHYL M1ATV2_SOLTU/148-244 YDPDNGKSCHQCRQKTLGQRT.................................AC..................SNCK.....................................LGQGQFCGDCLYMRYGENVTETNEN.AN.WICPVCRG...........ICN......CS..LCRR................AKGYAATGAIYRKVLRLGYKSVAHYL B9HRU9_POPTR/177-273 YDPEMGETCHQCRQKTLGLHT.................................HC..................SKCN.....................................LVQGQFCGDCLFMRYGENVIEVNQD.PN.WICPVCRG...........ICN......CS..LCRH................AKGWAPTGNLYRKVIRLGFKSVAHYL I1JEY9_SOYBN/160-256 YDPIKGETCHQCRQKTLGQHT.................................HC..................NKCE.....................................LLQGQFCGDCLYMRYGENVVEANHN.TK.WTCPPCRD...........ICN......CS..RCRR................GKGWMPTGNIYSKVSKLGFKSVAHYL A9S1H9_PHYPA/152-248 YDPVRGKTCHQCRQKTMGHRT.................................SC..................SNCQ.....................................SLHGQFCGDCLYMRYGENVLEANQN.PV.WECPVCRN...........ICN......CS..FCRL................KRGWTPTGSLYRKIKSLGYKSVAHYL U5DBC0_AMBTC/161-257 YDPVKGKTCHQCRQKTLGHRT.................................SC..................SKCK.....................................IIQGQFCGDCLYMRYGENLLEAIKK.PD.WICPVCRG...........ICN......CS..VCRL................KKGWPPTGALYRKIKSLGFTSVAQYL I1LHI6_SOYBN/158-254 YDSVHGKTCHQCRQKTLGYRT.................................SC..................SQCN.....................................MVQGQFCGDCLYMRYGEHVLEALQN.PT.WLCPVCRG...........ICN......CS..LCRQ................AKGWAPTGTLYKKISTLGYKSVAHYL Q1PF11_ARATH/157-253 YDPFNGKTCHQCRQKTMGHRT.................................QC..................SECN.....................................LVQGQFCGDCLFMRYGEHVLEALEN.PD.WICPACRG...........ICN......CS..LCRN................NKGWVPTGPIYRRIAALGYKSVAHYL Q0WPT6_ARATH/175-272 YDPVRGKCCHQCRQKTLGYHT.................................QC..................SQCN....................................HSVRGQFCGDCLYMRYGEHVLEALEN.PD.WICPVCRD...........ICN......CS..FCRT................KKGWLPTGAAYRKIHKLGYKSVAHYL B6THY7_MAIZE/184-280 YDQVRGQTCHQCRQKTLGHHT.................................SC..................CKCQ.....................................IVQGQFCGDCLYMRYGENVLEVKKN.PN.WICPVCRG...........ICN......CS..LCRT................KKGWFPTGSAYRKAIGLGYKSVAHFL C1ECT7_MICCC/202-303 ......TSCHFCRQKTADVKT.................................SC...................QCARWRK............................TPPGGRGRGAWCGWCLEMRMGENIDEALAD.AE.WRCPVCRD...........ICN......CSGANCLR...............AKRGLFPTQQLTHEAIEHGWQSVAHYL A4S3X2_OSTLU/129-230 ......TTCHFCRQKTTDAKT.................................TC...................VCGTWRR............................APEGGRGRGTWCGWCLEMRVGENLDEAMAD.AE.WRCPVCRD...........ICN......CSGANCLR...............AKRNLFPTQQLTGEALAYGWPSVAHYL D8UAL2_VOLCA/147-268 ....IGLTCHFCRQKMLCSEE.................................DCPRCSTRNSAAQCLGKSTCSSCK.....................................SATGIFCRACLWVRYGQVLEEVRED.PD.WLCPHCYEKKHGNWRKHGWFCN......SS..ICMR................KEGRLPTGIAFHKAQERGYASVAHML I1PEY8_ORYGL/164-286 YDPVLGICCHFCRQKKLCGEE.................................GCKRCGEGDLNQPCIGKTDCSSCH.....................................SSYGILCRACLKVRYGEDMDEVRKN.KN.WMCPHCIEEKGT...KKFWICN......SS..ICLK................KRKLSPTGIAIYDAREQGYESVAHLL M0T622_MUSAM/129-257 YDPLLGICCHFCRQKKLCGEE.................................DCRRCGDGNINQPCIGKTECSVCH.....................................SSNGVLCRACLKVRYGEEMEEVRAK.KD.WMCPHCIEEKGI...NPYWICNRQAHSTDG..ITEP................ADPMAPTGIAIYQAREQGYRSVAHLL M1B480_SOLTU/95-212 ....VGVCCHSCMEKKFCDEE.................................DCKRCGDLDMDQPCLGMTDCSICH.....................................SSNGFLCRECLKNRYGEELEEVRAN.KE.WICPHCTEEKGI...NPYWFCN......RL..LCLK................KRNIALT.VNTFKARKMGYKSVAHML F7ATF3_CIOIN/177-275 YDTINGTSCHQCRQKTIDTKS.................................CCRG................EDCV.....................................GVRGQFCGPCLKNRYGELVENVLLD.SE.WKCPVCRN...........ICN......CS..ICRN................RKGKCATGILIGIARQQGHSNVRAYL L9KN02_TUPCH/513-606 .....GSTCHQCRQKTIDTKT.................................NCRN................PDCW.....................................GVRGQFCGPCLRNRYGEEVKDALLD.PN.WRCPPCRG...........ICN......CS..FCRQ................RDGRCATGVLVYLAKYHGFGNVHAYL H3CNN5_TETNG/185-283 YSSVAGSTCHQCRQKTVDTKT.................................CCRS................EDCR.....................................GIQGQFCGPCLRNRYGEDVRKALTD.PE.WKCPPCRG...........ICN......CS..FCRQ................REGRCPTGILFPLAQYHGFSDVHSYL B2RZ03_XENTR/201-299 YNTVHGTTCHQCRQKTTDTKT.................................NCRN................AECP.....................................GVRGQFCGPCLRNRYGEDVRKALLD.PD.WRCPPCRE...........ICN......CS..FCRQ................RDGRCATGILFPLARYHGYSDVHTYL G5AMI4_HETGA/419-517 YDKVLGNTCHQCRQKTIDTKT.................................VCRN................QSCG.....................................GVRGQFCGPCLRNRYGEDVRSALLD.PD.WMCPPCRG...........ICN......CS..YCRK................RDGRCATGILIHLAKFYGYDNVKEYL W5KB70_ASTMX/350-448 LDKDHGSTCHQCRQKTLDTKT.................................ECRN................PYCQ.....................................GVKGQFCGPCLRNRYGEDVRTALLD.PE.WECPICRG...........VCN......CS..LCRK................RDGRCATGALTNLAKYYGYHNVKEYL I3JXT5_ORENI/281-379 WDKENGSSCHQCRQKTLDTKT.................................VCRS................GFCV.....................................GAKGQFCGPCLKNRYGEDVRTVLLD.PM.WSCPICRG...........MCN......CS..LCRK................KEGRCATGILVGLARYNGHDNVHEYL C3Y254_BRAFL/334-432 YNSVHGTSCHQCRQKTADTKT.................................TCRS................ESCV.....................................GIRGQFCGPCLRNRYGEEVKEALMD.PD.WTCPPCRG...........ICN......CS..FCRA................KKGRGATGILIHAAKHHGHGNVHAFL W4YRL7_STRPU/100-198 YDSIYGSTCHQCRQKTNDMKT.................................ICHS................ATCS.....................................GVRGQFCGPCLRNRYGEDAREALLD.ET.WTCPPCRG...........NCN......CS..FCRK................KQGRNATGILIHLAKHNGYRSVKDFL A7SQU1_NEMVE/57-155 YDSINGTSCHQCRQKTDDLKT.................................TCKS................ENCV.....................................GIRGQFCGPCLRNRYGEDAKEAIMN.PQ.WVCPPCRG...........ICN......CS..FCMK................KRGRRCTGILIHLAREKGFEDVKAFL K7J8Q4_NASVI/215-313 YDAVNGSSCHQCRQKTKDTKT.................................VCRS................GECI.....................................GVRGQFCGPCLRGRYGESALEALQN.PH.WACPPCRG...........LCN......CS..ICRT................RNGQRPTGILAPLAKEEGFESVKDYL A0A088AEX3_APIME/192-290 YCKINGTCCHQCRQKTLDTKT.................................VCRS................GECV.....................................GLRGQFCGPCLKGRYGENAVDALKD.PN.WTCPPCRG...........LCN......CS..ICRT................RNGLPPTGILAPLAQEEGYSSVMDYL J9K949_ACYPI/200-295 ...QSGTTCHQCRQKTADQKS.................................YCRY................KGCS.....................................GVRGNFCGFCLGRRYGENVASVLVN.PK.WACPPCRG...........YCN......CS..ICRR................RKGMAPTGQLAQQAVAGGYESVRHML J9LIE7_ACYPI/165-263 YSTDKGTTCHQCRQKTLDQKS.................................YCRH................QSCK.....................................GMRGMFCGFCLGKRYGEDVAEALLN.PV.WACPPCRG...........QCN......CS..ICRR................HQGKDPTGQMAQEAKAKGYNSVCDML D7SIV9_VITVI/39-138 YDSQNGKTCHQCRQKTMDFMA.................................PCKNQG............EKKQCS........................................FRFCHKCLLNRYGEKAEEAVAL.DE.WKCPKCRG...........ICN......CS..FCMK................KRGHRPTGILVHTAKATGFSSVSEML W1PNU6_AMBTC/43-142 YDSENGKTCHQCRQKTMDFMA.................................SCRNMR............QGKPCT........................................INFCHKCLLNRYGENAEEMAGV.DG.WNCPKCRG...........ICN......CS..FCMK................KRGQEPTGILAHTAKATGFSSVSEML K7MWJ4_SOYBN/39-138 YDSANGKTCHQCRQKTRDFAV.................................SCKNMK............NGKPCP........................................INFCHKCLLNRYGENAEEVQQL.GD.WTCPKCRN...........FCN......CS..FCRK................KRGELPTGQLFHTAKASGFKSVSEML F6GVR0_VITVI/62-160 .DSVYRKTCHQCRQKTRDSGT.................................LCRNLK............KNKPCP........................................IKYCQRCLLNRYGEKAEEVAQL.ED.WKCPKCRG...........ICN......CS..FCRK................KIGCAPTGILVHKAKATGFSSVSEML F6GVQ3_VITVI/59-158 YDSVNGKSCHQCRQKTRDFVA.................................SCRNLK............NDKPCS........................................INYCFKCLSNRYGEKAEEMALL.EN.WKCPKCRN...........ICN......CS..LCRK................KIGCNPTGMLVYTAKATGFSSVSEML M0TRH9_MUSAM/358-457 YDSENGKTCHQCRQKTMDFAA.................................SCKQLR............GDKPCP........................................IKFCHKCLLNRYGENAEEAAVL.EN.WSCPKCRG...........VCN......CS..FCMK................KKGQQPTGILIHAAKATGFSSVHELL B9RSM2_RICCO/44-143 YDSDNGKTCHQCRQKTRDFAA.................................ECKILK............GNKQCT........................................IKYCHKCLMNRYGEKAEEVALL.DN.WTCPKCRG...........ICN......CS..FCMK................KRGHKPTGILVHTAKENGFSSVSELL D7MJW1_ARALL/24-123 EDSSNGKTCHQCRQKRTDLVG.................................SCVTKK............KDKTCP........................................IKLCTKCILNRYGENAEEVALK.KD.WICPKCRG...........NCN......CS..YCMK................KRGQKPTGILVHTAKKTGFSSVSELL M4EMD1_BRARP/20-115 ....KMKSCHQCRKLRSDAVG.................................NCVTKK............GAKTCV........................................LKYCRRCLLTRYGEIGEEVAVN.DN.WVCPKCRE...........ICN......CS..SCRN................NKGEKPTGKLTTTAKKNGCSNVSEFL #=GC seq_cons YDs.pGpTCHQCRQKTh-t+s.................................sCpt................ppCs......................................hpGpFCGtCLhsRYGEslcEshts.ss.WtCPhCRG...........ICN......CS..hCR+................++GhsPTGhLhppA+tpGasSVscaL //