# STOCKHOLM 1.0 #=GF ID Dev_Cell_Death #=GF AC PF10539.10 #=GF DE Development and cell death domain #=GF AU Finn RD;0000-0001-8626-2148 #=GF AU Coggill P;0000-0001-5731-1588 #=GF SE PROSITE_PS51222 #=GF GA 27.80 27.80; #=GF TC 28.10 28.40; #=GF NC 27.10 27.30; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 16008837 #=GF RT DCD - a novel plant specific domain in proteins involved in #=GF RT development and programmed cell death. #=GF RA Tenhaken R, Doerks T, Bork P; #=GF RL BMC Bioinformatics. 2005;6:169. #=GF DR INTERPRO; IPR013989; #=GF DR SO; 0000417; polypeptide_domain; #=GF CC The DCD domain is found in plant proteins involved in #=GF CC development and cell death. The DCD domain is an approximately #=GF CC 130 amino acid long stretch that contains several mostly #=GF CC invariable motifs. These include a FGLP and a LFL motif at the #=GF CC N-terminus and a PAQV and a PLxE motif towards the C-terminus of #=GF CC the domain. The DCD domain is present in proteins with different #=GF CC architectures. Some of these proteins contain additional #=GF CC recognisable motifs, like the KELCH repeats or the ParB domain. #=GF SQ 50 #=GS M0TCT6_MUSAM/71-193 AC M0TCT6.1 #=GS M0RJA5_MUSAM/1-118 AC M0RJA5.1 #=GS J3LH20_ORYBR/118-240 AC J3LH20.1 #=GS J3MCM5_ORYBR/234-356 AC J3MCM5.1 #=GS C4JC33_MAIZE/213-335 AC C4JC33.1 #=GS Q0ISF8_ORYSJ/226-347 AC Q0ISF8.1 #=GS Q0ISF8_ORYSJ/46-167 AC Q0ISF8.1 #=GS I1ILG5_BRADI/45-166 AC I1ILG5.1 #=GS D7MKP0_ARALL/60-181 AC D7MKP0.1 #=GS F6HJ68_VITVI/95-216 AC F6HJ68.1 #=GS A5BDJ5_VITVI/77-199 AC A5BDJ5.1 #=GS K7KL96_SOYBN/17-140 AC K7KL96.1 #=GS W1PJI3_AMBTC/185-307 AC W1PJI3.1 #=GS M1CZK1_SOLTU/149-271 AC M1CZK1.1 #=GS I1QRB9_ORYGL/17-142 AC I1QRB9.1 #=GS A0A3B6HRL4_WHEAT/12-138 AC A0A3B6HRL4.1 #=GS J3MBQ8_ORYBR/163-288 AC J3MBQ8.1 #=GS J3MBQ8_ORYBR/642-767 AC J3MBQ8.1 #=GS M7ZFQ5_TRIUA/17-143 AC M7ZFQ5.1 #=GS M1CET0_SOLTU/19-143 AC M1CET0.1 #=GS K7N0U5_SOYBN/18-142 AC K7N0U5.1 #=GS F6HFR8_VITVI/13-138 AC F6HFR8.1 #=GS D7LHS6_ARALL/15-139 AC D7LHS6.1 #=GS C1MWK7_MICPC/33-171 AC C1MWK7.1 #=GS D8T306_SELML/31-156 AC D8T306.1 #=GS K4ACV2_SETIT/182-309 AC K4ACV2.1 #=GS M4E9J4_BRARP/210-337 AC M4E9J4.1 #=GS J3KWN9_ORYBR/40-173 AC J3KWN9.1 #=GS Q5VQH0_ORYSJ/22-159 AC Q5VQH0.1 #=GS D7L9T6_ARALL/12-140 AC D7L9T6.1 #=GS B9S485_RICCO/37-165 AC B9S485.1 #=GS M4CZJ5_BRARP/19-146 AC M4CZJ5.1 #=GS F4K9G6_ARATH/19-146 AC F4K9G6.1 #=GS F6HC99_VITVI/37-165 AC F6HC99.1 #=GS M1AU45_SOLTU/28-156 AC M1AU45.1 #=GS M1DWI3_SOLTU/38-165 AC M1DWI3.1 #=GS W1NJ70_AMBTC/183-311 AC W1NJ70.1 #=GS B9SL20_RICCO/21-149 AC B9SL20.1 #=GS K7MTP9_SOYBN/35-162 AC K7MTP9.1 #=GS M0SYG4_MUSAM/35-161 AC M0SYG4.1 #=GS I1QEP5_ORYGL/34-171 AC I1QEP5.1 #=GS M0TC70_MUSAM/27-155 AC M0TC70.1 #=GS U5CU73_AMBTC/98-220 AC U5CU73.1 #=GS F4IUS3_ARATH/320-442 AC F4IUS3.1 #=GS K7KJN4_SOYBN/581-703 AC K7KJN4.1 #=GS M1BZM1_SOLTU/133-256 AC M1BZM1.1 #=GS B9REY4_RICCO/201-323 AC B9REY4.1 #=GS B9I831_POPTR/199-321 AC B9I831.1 #=GS D7TUX6_VITVI/132-254 AC D7TUX6.1 #=GS W1P8C8_AMBTC/65-187 AC W1P8C8.1 M0TCT6_MUSAM/71-193 SGFIFMCSSKTKPECFRYHVFGLPKGRKEAVEKIKLGAKLFLYDYDLKLLYGVYKATCQGGMDL.DRGAF..............RGAYPAQVKFK........VFMDCLPLPETTFRHAIQENYY........TR.IKFSPELNSKQVRKLLSLF M0RJA5_MUSAM/1-118 .....MCSGGTKPECYRYQVFGLPKGKKELVEKIKPGTKLFLYDYDLKLLYGVYRAACQGGMDL.EPDAF..............RGGFPAQVKFK........IDKDCLPLPEATFKLAIRDNYN........FK.GKFSPQLNSKQVHKLLSLF J3LH20_ORYBR/118-240 AGFIFMCSAKKKLECFHSGVFGLPKWKMDLVEKIRPGSKLFLYDFDLKLLYGVYKAKTKGALDL.VRSAF..............NGKFPAQVKFK........VDKDCLPIPESSCKHAIKENYN........SK.GKFTQELSSRQVHRLLELF J3MCM5_ORYBR/234-356 GGLIFMCNAQTKPECFQSRLFGYPKGKIETVEKVRPGMRLFLYDFDLKLLYGVYRAVSKGGLDL.VRDAF..............SGKFPAQVKFK........IDKDCLPLPESRFKDAIKENYN........SK.SKFNPELNSRQVHRLIALF C4JC33_MAIZE/213-335 AGFIFMCNAKTKKECYQSRLFGMPSGKIEMVKKIRPGVKLFLYDFDLKLLYGVYKAASHGGLNL.VHEAF..............NGKFPAQVKFK........IDKDCRPLPESSLKQAIKENYN........AK.SKFDPELTTKQVQRLLLLF Q0ISF8_ORYSJ/226-347 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNGGLTL.VPDAF..............RGRFPAQVKFT........VDGDFMPIPESSLRTAIKENYS........N..GKFSPELTLVQVEKLRALF Q0ISF8_ORYSJ/46-167 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDGGLDL.APAAF..............GGRFPAQVKFT........IDGDFMPIPESSLRSAIKENYS........N..GKFSSELTLAQVENLRTLF I1ILG5_BRADI/45-166 AGFIFMCNGATKPECFRYRVLGLPRWRLDTVSRIKRGAGLFLYDFDARYLYGPYLADSDGGLAL.EPAAF..............QGRYPAQVKFT........IHGDFMPIPENSVRSAIKENYS........R..GKFTPELTFAQVEKLTSLF D7MKP0_ARALL/60-181 PGYIFMCNGRTKTDCYRYRVFGIPRGRKDVVESIKPGMKLFLYDFEKRLLYGVYEATGGGRLDI.EPEAF..............DKKYPAQVGFR........IVMNCLPLPENIFKSAIYENYK........G..SKFKQELSPHQVMSLLSLF F6HJ68_VITVI/95-216 FGFIFMCNGKTKPQCYQYRVFGLPTGRKEEVAKIKVGTKLFLFDFDLKLLYGIYEASSKGQMNL.EQDAF..............NGKFPAQVKFK........IWKECLPLSEGAFKNAIRDNYE........G..SKFRPELTKKQVKALISLF A5BDJ5_VITVI/77-199 AGYIFMCNGKTKPDCFKYRVFGLPAARIDVVAKIKPSTILFLFDFNLKILYGVFVAASNGILGL.EPRAF..............GGKFSAQVRFE........IFKDCLPLPEIDFKHVIKDNYQ........GH.CKFRQELSNKQVNDLIPLF K7KL96_SOYBN/17-140 SGFIFMCNRITKPECYCYRVFGLPAGRKDVVEKINPGTYLFLFDTDVKLLYGIYMATSTGKLNI.EPLAF..............CQKFPAQVQFK........IYKDCLPLPVNCFKHAIRDNYQ........KGSNKFNPELNIRQVRSLIELF W1PJI3_AMBTC/185-307 MGMIFMCNAQTKKDCFTYKVLGLPGSKKELVAKVYKGMRLFLFDVDLRLMYGIYKASGRGGYNI.EPKAF..............KSGFPSQVRFT........VLNDCLPLPEEKFKAAIKSNYY........TK.NKFNVELTSEQVKNLCKLF M1CZK1_SOLTU/149-271 MGMIFMCNSETKKDCYGYKVVGLPANKREMVEKVYKGMKLFLYDVDLKLMYGIYKAAENGGFSI.EPKAF..............KSQFPSQVRFS........IVDDCLPLAEEKFREVIKTNYY........TK.TKFDCKLTSEQVNNLCKLF I1QRB9_ORYGL/17-142 AGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERKLYGVFEATSDGGFNI.IRSAF.SS..........IGCSYPAQVCFK........IIWKCRPLTEDEFSPAIKENYY........MP.WKFYFDLSYQQVVRLYQLF A0A3B6HRL4_WHEAT/12-138 AGAIFMCNTRAREQFFGSGVFRLALEYQPFVNNVKQGMPLFLFDYNERKLYGVFEAASDGGLDITDRAAF.RS..........SGHSYPAQVRFK........IIWKCRPLAEDEFSHAIKENYY........TI.YKFYFDLSYQQVVQLYELF J3MBQ8_ORYBR/163-288 GGAIIICNHMLKREFFQKKLFGLPGYATSFIKKIRAGMLLFVFEHEERKLYGVFEANSDGSLNN.LTNPF.TS..........LRKPRPAQVHFR........RVWFCKPLVEIEFSSAIKGNCL........QPQMSF.FGISYQQVLNLVDLF J3MBQ8_ORYBR/642-767 DGAIFLCNRLTRKECFEKKLFGLSAHCADFIQTVKVGATLFLYDVDQHKLHGVFEATSDGSMNI.IPDAF.VS..........SGKSYPCQIRFK........RIWFCKPLMESEYHDAMQTKFM........PK.NKFRNGLSHQQVLKLLHLF M7ZFQ5_TRIUA/17-143 DGAIFLCNHLTRKECFHRKLFGLSSKCTEFIHKVKSGATLFLYDVEQRKLHGVFEATSDGAMNI.IPGAY.AS..........SGFQYPCQIRFK........RIWFCKPLMESEFEDAVQDNYY........FARNKFNYGLTHQQVVKLLHLF M1CET0_SOLTU/19-143 .GAIFMSNIATKRDCFKHKVLGLPSSMGNFVKEVKKGMILFLFEYERRQLFGVYRAISDGGMNI.VPHAF.SS..........SGKQFSAQVRFV........LIWRCSPLSEDEFRDAIRENYF........ST.RKFHFGLSDEQVHRLLRLF K7N0U5_SOYBN/18-142 .GAIFMSNSETKRECFKRGLFGLPSSDIQFVEQIKTGMILFLFEYEKRQLHGVFKASCDGAINI.VPNAF.AK..........VGKQFPAQVKFD........AIWLCKPLPEKLFRDAIRENYF........TS.NKFNFGLSENQVHELLYLF F6HFR8_VITVI/13-138 CGAIFMSNRKTMEECLRRNLFGLPFSKAGFVKHVKVGMVLFLFEYEKRELHGVFQASTDGAIDI.VPEAF.CS..........SGKRFSAQVRIT........TIWNCTPLTEHEFSDAIRDNYF........AA.NKFNFGLSKDQVHRLLLLF D7LHS6_ARALL/15-139 .GAIFMSNNSTRKECLSRGLFGLPIGLAGFVKQVKAGMMLFLFEFEKRELHGVFQACSDGAINI.EPNAF.QS..........SGKQFPAQVKFT........EKWRCRPLCESEFGNAIHENYF........TS.KKFKFGLSKAQVQRLLKLF C1MWK7_MICPC/33-171 GGVIFICSRETYDDTTRAGLFGLTQGSWSFVKRITPGMPLFLYNLTERRFHGVFEATSDGAMNA.DPTAWKTSGAGAGDAAGIDGSPYPAQVRYKHTRVTCSASAASCKPFLRFAAGEA...............NGKKFRLDLTPGEATRLARVF D8T306_SELML/31-156 GGFIFFCNDETMPEDFERCLFGLPRSFIDSVKGIRKGLPLFLYNYSNRCLHGVFEASSDGGLNI.EPDAW.INK...DARSGVDVSRYPAQVRVR........IRENRAPLEEDAFRPVL...FH........YEAKKFRLELSMSEVLA..... K4ACV2_SETIT/182-309 GGYIFVCNNDTMQEDLKRQLFGLPARYRDSVRAITPGLPLFLYNYTTHQLHGVFEAASFGGSNI.DPTAW.EDK...KCKGE...SRFPAQVRIR........IRKLCKPLEEDSFRPVL...HH........YDGPKFRLELSIAETLSLLDLC M4E9J4_BRARP/210-337 GGYVFVCNNDTMEENLKRQVFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFGGTNI.ELNAF.EDK...KCPGE...SRFPAQVRAV........TRKVCLPLEEDSFRPIL...HH........YDGPKFRLELSVPEVLSLLDVF J3KWN9_ORYBR/40-173 GGVIFCCNRNTFDECFAKQLFGLPPRHIVYVKNVKPGLPLFLFNSTDRSLHGIFEATSPGQRCI.DQFAW.MSE.....PTGGTITPFPAQVRFS........TKTKCHPLPEDKYKSVLINNYF......SKERPSYFYFELDHKQTRDLISLF Q5VQH0_ORYSJ/22-159 GGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKATSTGQLNI.DRFAW.MSEQSNDAKTNAKTTPFPAQVRFS........TRTECPPLPESKYKSVIINNYR.......KDKPSHFRFELDHRQTRDLISLF D7L9T6_ARALL/12-140 CGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASEGKLNI.DSKAW.SPN.....GT..DPTPYPAQVKVR........VRVRCEPLPEEKFSPVISENYK.........DEKMFWFELDRGQTNKLLRLF B9S485_RICCO/37-165 AAVIFGCKHNTFEECFSSSLFGLPAPHFLYVKNIYPGMPLFLFNYSDRKLHGIFEAANHGGLNI.NSQAW.IED.....GL..DSTPYAAQVKFH........IQMKCQPLVEDQFGPIIAENYY.........APKLFWFELDHNQTKKLISLF M4CZJ5_BRARP/19-146 GGVVFGCTKHTIKECLSKHLFGLPYNHISYVQKIDTALPLFLFNYSDRKLHGIFEAAGPGLLNI.NPYAW.TSN.....GS..DRTSFPAQVQIS........ARLQCEPLSEEQFKSAIEDNYY.........TPHHFWFELDHLQTNKLICL. F4K9G6_ARATH/19-146 GGVVFGCTKNTIKECMSKQLFGLPSNHYPYVQKIDIGLPLFLFNYSDRTLHGIFEAAGCGQLNF.DPYGW.TSD.....GS..ERTSYPAQVPIS........VRLQCEPLSEEKFKPAIADNYY.........SSHHFWFELDHFQTRKLTCL. F6HC99_VITVI/37-165 GGVIFGCKHNTIDECHSKQLFGLPAAHFSYVRNINPGLTLFLFNYSDRKLHGIFEAASPGQMNI.NPYGW.TPD.....GS..QLTPYPAQVRIQ........IRMQCQPLLEEQFKPIISKNYY.........EHRLFWFELDRAQTSKLVSLF M1AU45_SOLTU/28-156 GGVIFGCTNKTIRECLSKQLFGLPVLHFSYVQNVDSGLPLFLFNYSDKKLHGIYEAAGPGQMYI.DQYAW.TSD.....GS..VRTPYPAQVQIR........VRLLCQPLLENQFKPVIKDNYY.........GQNHFLFELDHVQAGKLISIF M1DWI3_SOLTU/38-165 GGVIFGCTVSTMNECIRNQLFGLPAPHISYVKNIDPGLPLFLFNYSNRELHGIYEAASSGRMNI.NPYGW.TLD.....GS..GRTEYPAQVQVR........LRLHCRPLAESLFKPIIQENYY........HDQRHFTFELDHVQAGNLIS.. W1NJ70_AMBTC/183-311 GGVIFGCKNSTITECLSKQLFGLPAPHFSYVKNIMPGLPLFLFNYSDRKLHGIFEAASMGHMNI.NPYGW.TND.....GS..ERTQFPAQVRVC........VRQHCQPLAEQQFKSLISENYY.........TNAYFWFELDHAQVDRLIALF B9SL20_RICCO/21-149 GGVIFGCKKNTMSECLSEQIFGLPAPHFSYVKNIDPGLPLFLFNYENKKLYGIFEAAGAGQMNI.NPYGW.TTD.....GS..RRTQYPAQVQIR........VRLQCHPLSEEKFKPIIADNYY.........RYHHFWFELDHAQTSKLMSLF K7MTP9_SOYBN/35-162 GGIIFGCKNATMKECLSKQLFGLPAHHFCYVKNIDPGLPLFLFNYTDRKLHGIFEAASSGRMFI.DPYGW.TTD.....GS..ERTQYPAQVQIC........VRLKCHPLPEDKFKEVIADNYY.........THNRFYFELDHAQTSKLISL. M0SYG4_MUSAM/35-161 GGVIFGCKHKTMEECLSKKIFGLPSTHFVYVRNIEEGLPLFLFNYSDRKLHGIFEAASHGQLNT.NSYAW.TDG.....ST..KRTPYPAQVSIR........IKTNCAPLTENQFKKIIEDNYY.........NPQHFWFELDHAQTSALIA.. I1QEP5_ORYGL/34-171 GAVIFGCTNNTIAECHSRQLFGLPRTHLSYVQNIKEGLPLFLFNYDDRKLYGIYEAASNGKFCP.ESNAW.SQD.....GK..GKTSYPAQVAMR........IKVWCVPLAESQFRGAILANYYQRMPGAPGQKLHFFQFELDHAQTRALMDMF M0TC70_MUSAM/27-155 GGTIFGCKDATMKECLKKQLFGLPSTHFSYVRNIEPGLPLFLFSYTNRTMYGIFEAACHGQMNI.DPYAW.TEN.....GA..QRTPFPAQVRVY........TKTPCQPLSEKQFKSVIEDNYY.........AQKHFWFELDHAQAKGLMLLF U5CU73_AMBTC/98-220 AGLIFMCNGKTKPDCFRYQVMGVRSGRKELVMSIKPGLTLFLYDFDLKLLYGIYKAASPGGMKL.EPNAF..............NGEFPAQMRFK........IHKDCQPLPESVFKRAIKDNYD........KS.NKFKCELTSSQVHKLSALF F4IUS3_ARATH/320-442 GGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLYDYDLKLLYGIFEASSAGGMKL.ERNAF..............GGSFPAQVRFK........VFSDCIPLAESQFKKAIIENYN........NK.NKFKTELTHKQVFKLKKLF K7KJN4_SOYBN/581-703 GGFIFLCNAKTKPDCFRYHVMGVSAGKKDDVLQIKPGLKLFLYDFDLKLLYGIYKASSSGAMKL.EPKAF..............GGKFPAQVRFK........IASDCFPLPESIFKKAIKDNYN........EK.HKFRTELTVRQVRKLTQLF M1BZM1_SOLTU/133-256 GGVIFMCNARTKEDCFRYRVMGVSASKQHFVMGIKPGLKLFLFDFDLKLMYGIYEASSAGGMRL.QPAAF..............GGAFPAQVPFR........IHKDCIPLPENVFKKAIKDNYD........EKTRKFKTELTVMQVEKLTELF B9REY4_RICCO/201-323 GGLIFMCNSRTKPDCFRYQVMGMTSSKKDLVLGVKPGLKLFLYDFDFRLMYGIYQASSSGGMRL.EPKAF..............GGSFPVQVRFS........VHKDCVPLPESVFKKAIKDNYD........AS.NKFDIELTIPQVRKLSELF B9I831_POPTR/199-321 GGMIFMCSAKTKPDCFRYRVMGVTMNKKELILGVKPGLKLFLYDFDLKLMYGIYEASSSGGVKL.EPRAF..............GGSFPVQVRFD........VHKDCYPINESVFKKAIKDNYN........EK.NKFKTELTVQQVRKLSALF D7TUX6_VITVI/132-254 GGLIFMCSAKTKPDCFRYHVMGVSTSKKDLVLGVKPGLKLFLYDFDLKLMHGIYKASSSGGMKL.EPEAF..............DGAFPVQVRFT........VHMDCYPLPESIFKKAIKDNYD........KT.NKFKTELTMEQVKKLMKLF W1P8C8_AMBTC/65-187 SGFIFMCNAKTKADCFRNRVFGLPSNRKEDVEAIKPGTTLFLYDFDFKLLYGIYKATSPGGMNL.ERGAF..............GGAFPAQVRFK........IVKDCLPVHESAFKEAIVDNYN........SK.YKFKPELSPRQVKHLSRLF #=GC seq_cons uGhIFhCNspT+pECappplFGLPss+hshVcpI+sGhhLFLa-a-p+pLaGlacAuSsGuhsl.-PpAF..............tspFPAQV+Fc........lchcChPLsEspF+sAIp-NYh........tp.pKFphELoptQVp+LhpLF //