Summary: Thylakoid formation protein
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THF1 is localised to the outer plastid membrane and the stroma. THF1 has a role in sugar signalling . THF1 is also thought to have a role in chloroplast and leaf development . THF1 has been shown to play a crucial role in vesicle-mediated thylakoid membrane biogenesis .
Huang J, Taylor JP, Chen JG, Uhrig JF, Schnell DJ, Nakagawa T, Korth KL, Jones AM; , Plant Cell. 2006;18:1226-1238.: The plastid protein THYLAKOID FORMATION1 and the plasma membrane G-protein GPA1 interact in a novel sugar-signaling mechanism in Arabidopsis. PUBMED:16582010 EPMC:16582010
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR017499
Psp29, originally designated sll1414 (SWISSPROT) in Synechocystis sp. (strain PCC 6803), is found universally in Cyanobacteria and in Arabidopsis. It was isolated and partially sequenced from purified photosystem II (PS II) in Synechocystis. While its function is unknown, mutant studies show an impairment in photosystem II biogenesis and/or stability, rather than in PS II core function.
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|Cellular component||photosystem II (GO:0009523)|
|Biological process||photosynthesis (GO:0015979)|
|thylakoid membrane organization (GO:0010027)|
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Curation and family details
|Seed source:||Pfam-B_003380 (release 23.0)|
|Author:||Pollington J, Finn RD|
|Number in seed:||27|
|Number in full:||122|
|Average length of the domain:||204.00 aa|
|Average identity of full alignment:||37 %|
|Average coverage of the sequence by the domain:||80.16 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||3|
|Download:||download the raw HMM for this family|
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