Summary: Branched-chain amino acid ATP-binding cassette transporter
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Branched-chain amino acid ATP-binding cassette transporter Provide feedback
This domain family is found in bacteria, archaea and eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00005. There is a conserved AYLG sequence motif. This family is the C terminal of an ATP dependent branched-chain amino acid transporter.
Adams MD, Wagner LM, Graddis TJ, Landick R, Antonucci TK, Gibson AL, Oxender DL; , J Biol Chem 1990;265:11436-11443.: Nucleotide sequence and genetic characterization reveal six essential genes for the LIV-I and LS transport systems of Escherichia coli. PUBMED:2195019 EPMC:2195019
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Curation and family details
|Number in seed:||827|
|Number in full:||8057|
|Average length of the domain:||22.90 aa|
|Average identity of full alignment:||46 %|
|Average coverage of the sequence by the domain:||7.99 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||3|
|Download:||download the raw HMM for this family|
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