Summary: Cytomegalovirus glycoprotein N terminal
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Cytomegalovirus glycoprotein N terminal Provide feedback
This domain family is found in viruses, and is approximately 30 amino acids in length. The family is found in association with PF03554. This family is an envelope glycoprotein of human cytomegalovirus (HCMV).
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR021003
This domain family is found in viruses, and is approximately 30 amino acids in length. The signature is found in association with . This family is an envelope glycoprotein of (Human herpesvirus 5) [PUBMED:11090188].
- the number of sequences which exhibit this architecture
a textual description of the architecture, e.g. Gla, EGF x 2, Trypsin.
This example describes an architecture with one
Gladomain, followed by two consecutive
EGFdomains, and finally a single
- the UniProt description of the protein sequence
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We make a range of alignments for each Pfam-A family:
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Key: available, not generated, — not available.
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Curation and family details
|Number in seed:||5|
|Number in full:||117|
|Average length of the domain:||25.90 aa|
|Average identity of full alignment:||67 %|
|Average coverage of the sequence by the domain:||19.31 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||4|
|Download:||download the raw HMM for this family|
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