Summary: Mucin-2 protein WxxW repeating region
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Mucin-2 protein WxxW repeating region Provide feedback
This family is repeating region found on mucins 2 and 5. The function is not known, but the repeat can be present in up to 32 copies, as in C3Y5K5 from Branchiostoma floridae. The region carries a highly conserved WxxW sequence motif and also has at least six well conserved cysteine residues.
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR025155
This domain of unknown function carries a highly conserved WxxW sequence motif and also has at least six well conserved cysteine residues. It is found in variable numbers ranging from a single copy up to 32 consecutive copies, as in SWISSPROT, from Branchiostoma floridae.
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Curation and family details
|Seed source:||Pfam-B_2205 (release 24.0)|
|Author:||Mistry J, Aldam G|
|Number in seed:||259|
|Number in full:||965|
|Average length of the domain:||84.80 aa|
|Average identity of full alignment:||34 %|
|Average coverage of the sequence by the domain:||12.06 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||2|
|Download:||download the raw HMM for this family|
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