Summary: DsrE/DsrF/DrsH-like family
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DsrE/DsrF/DrsH-like family Provide feedback
DsrE is a small soluble protein involved in intracellular sulfur reduction . The family also includes YrkE proteins.
Pott AS, Dahl C; , Microbiology 1998;144:1881-1894.: Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur. PUBMED:9695921 EPMC:9695921
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This tab holds annotation information from the InterPro database.
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- the number of sequences which exhibit this architecture
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This example describes an architecture with one
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We make a range of alignments for each Pfam-A family:
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Curation and family details
|Number in seed:||23|
|Number in full:||7565|
|Average length of the domain:||151.80 aa|
|Average identity of full alignment:||73 %|
|Average coverage of the sequence by the domain:||43.03 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 80369284 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||2|
|Download:||download the raw HMM for this family|
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There is 1 interaction for this family. More...
We determine these interactions using iPfam, which considers the interactions between residues in three-dimensional protein structures and maps those interactions back to Pfam families. You can find more information about the iPfam algorithm in the journal article that accompanies the website.
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe group, to allow us to map Pfam domains onto UniProt sequences and three-dimensional protein structures. The table below shows the structures on which the DrsE_2 domain has been found. There are 14 instances of this domain found in the PDB. Note that there may be multiple copies of the domain in a single PDB structure, since many structures contain multiple copies of the same protein seqence.
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