Summary: Iron/zinc purple acid phosphatase-like protein C
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Iron/zinc purple acid phosphatase-like protein C Provide feedback
This domain is found at the C-terminus of Purple acid phosphatase proteins.
Li D, Zhu H, Liu K, Liu X, Leggewie G, Udvardi M, Wang D;, J Biol Chem. 2002;277:27772-27781.: Purple acid phosphatases of Arabidopsis thaliana. Comparative analysis and differential regulation by phosphate deprivation. PUBMED:12021284 EPMC:12021284
External database links
- the number of sequences which exhibit this architecture
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This example describes an architecture with one
Gladomain, followed by two consecutive
EGFdomains, and finally a single
- the UniProt description of the protein sequence
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We make a range of alignments for each Pfam-A family:
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1Cannot generate PP/Heatmap alignments for seeds; no PP data available
Key: available, not generated, — not available.
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Curation and family details
|Number in seed:||130|
|Number in full:||888|
|Average length of the domain:||64.20 aa|
|Average identity of full alignment:||29 %|
|Average coverage of the sequence by the domain:||12.89 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||1|
|Download:||download the raw HMM for this family|
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For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the PDBe group, to allow us to map Pfam domains onto UniProt sequences and three-dimensional protein structures. The table below shows the structures on which the Metallophos_C domain has been found. There are 20 instances of this domain found in the PDB. Note that there may be multiple copies of the domain in a single PDB structure, since many structures contain multiple copies of the same protein seqence.
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