# STOCKHOLM 1.0 #=GF ID SUKH_5 #=GF AC PF14567.1 #=GF DE SMI1-KNR4 cell-wall #=GF AU Coggill P #=GF SE Pfam-B_7167 (release 26.0) #=GF GA 27.00 27.00; #=GF TC 27.00 27.10; #=GF NC 26.80 26.80; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF CC Members of this family are related to the SMI1/KNR4-like or SUKH #=GF CC superfamily of proteins. #=GF SQ 27 #=GS A0KT76_SHESA/1-131 AC A0KT76.1 #=GS Q12R95_SHEDO/1-131 AC Q12R95.1 #=GS Q086X2_SHEFN/1-131 AC Q086X2.1 #=GS A3QH89_SHELP/1-131 AC A3QH89.1 #=GS D4ZBL0_SHEVD/1-131 AC D4ZBL0.1 #=GS A8H7F8_SHEPA/1-132 AC A8H7F8.1 #=GS A1S8W2_SHEAM/1-131 AC A1S8W2.1 #=GS Q21KG4_SACD2/2-132 AC Q21KG4.1 #=GS A0Y938_9GAMM/1-109 AC A0Y938.1 #=GS B3PC71_CELJU/34-164 AC B3PC71.1 #=GS E3A4U8_PSEAI/1-131 AC E3A4U8.1 #=GS B0KR80_PSEPG/1-133 AC B0KR80.1 #=GS C1DFY0_AZOVD/1-133 AC C1DFY0.1 #=GS D1W447_9BACT/1-147 AC D1W447.1 #=GS D4RXT0_9FIRM/2-135 AC D4RXT0.1 #=GS D0WEZ4_9ACTN/5-134 AC D0WEZ4.1 #=GS C1D4A4_DEIDV/3-141 AC C1D4A4.1 #=GS A4SRI0_AERS4/1-119 AC A4SRI0.1 #=GS B8CKE3_SHEPW/1-119 AC B8CKE3.1 #=GS A4Y9N5_SHEPC/1-119 AC A4Y9N5.1 #=GS Q880E4_PSESM/5-136 AC Q880E4.1 #=GS A6X428_OCHA4/5-137 AC A6X428.1 #=GS Q7M7B0_PHOLL/5-136 AC Q7M7B0.1 #=GS C4S745_YERBE/5-136 AC C4S745.1 #=GS B2C6T5_ACIBA/7-138 AC B2C6T5.1 #=GS Q0VNR5_ALCBS/1-133 AC Q0VNR5.1 #=GS Q2BMU0_9GAMM/1-131 AC Q2BMU0.1 A0KT76_SHESA/1-131 MHDIIEQLQERSETVPVPLELPTFEQLVEVEEQILIPLPRELKEYLLHASDVIYGAIEPVTAADPYSHTY..LPEVTCYAWS.IGLPRDLIAI.CQLGDDFYCID.....QDGQ........VHFWQ..NGDF.TDTYWESFWEWVEDIWL Q12R95_SHEDO/1-131 MHELIEQLQALNEPVPVPLELASFEQLVEVEEQILISLPRELKVYLMEASDVVYGHIEPVTASDPQSHTY..LPEVTCYAWS.IGLPRELIAI.CQQGDNFYCID.....QDGQ........VHFWK..NGRF.VGEVFESFWHWVDRVWL Q086X2_SHEFN/1-131 MNDIIEQLQELSETVPVPLELPTFEQLVEVEEQILIGLPNDLKEFLLYGSDVIYGTLEPVTAADPSSHTY..LPEVACYAWS.IGLPREQIAI.CQIGDSFYCID.....EESQ........VLFWK..KGRF.SDKVWESFWHWAEDVWL A3QH89_SHELP/1-131 MHDLIEQLRELSETVPVPLELPSFDQLVEVEEQILIPLPAELKEYLLYASDVIHGTLEPVTAADPYAHTY..LPEVTSYAWS.IGMPREYIAI.CQQGDDFYCID.....QEGQ........VMLWQ..DGEL.AEESWESFWQWVEEVWI D4ZBL0_SHEVD/1-131 MHEIIEQLQELSETVPIPLELPTFEQIVVVEEEILMPLPPELKEYLLYASDVIYGSLEPVTASDPYSHTY..LAEVTAYAWS.IGMSREYVAI.CQQGNSFYCID.....QEGQ........VMLWS..EDEL.ESETWESFWQWAEHVWL A8H7F8_SHEPA/1-132 MNDIIEQLQEMSETVPVPLELATFEQIVEVEEEILIPLPMELKEYLLYASDVICGSLEPVTASDPNSHTY..LSEVTSYAWS.IGLPREFVPI.CQQGDNFFFIS.....QEGQ........IQLWQ..DGEIDEEETWESFWDWAEDVWM A1S8W2_SHEAM/1-131 MHELIEQLQEMSEQVPVPLELPSFDQLLDVEEAILIPLPADLKEYLLNASDVIVGSLEPVTVADPHSHTY..LSEVAAYAWS.IGLPREMIPI.CQNGDNFYCID.....QEGQ........VHYWA..FGDF.TEDQWDSFWEWAEDVWI Q21KG4_SACD2/2-132 INEIAEMLAARSLKTAYPLELPTMDDIVEAHEAMLISVPADFRDYLLHSSNCIYGRLEPVTVADRNSHTY..LPEVAAEAWS.RGMPREMIPL.CVDGDNVYCVA.....EDGE........VFLWEGDDD...MESVAEDVWQWVRDVWL A0Y938_9GAMM/1-109 MDDIID...............A........EEQILLSLDPEFRQFLLRVSDVVCGSIEPVTVADVNSHTY..LPEVAAMAWS.LGVSRELIPV.CEYQGGYYCAD.....EVGE........VVYWK..DGEASDEEPWADVWQWAEGVWL B3PC71_CELJU/34-164 MEDVIELLREYNEPVPVPLDLPDEDQLVEIEEEILLPIPRDMRRFLLEVSDVVYGSIEPVTAADPHSHTY..LPEVTATAWS.LGVPRYLMPL.CEVNGNYYCVE.....PEGE........VVFWR..DGDL.TDETWPSVWHWARDVWL E3A4U8_PSEAI/1-131 MEDVIEKLRELNEPVPVPLELPEEELLVEIEEELLIGIPAEFREFLLLVSDVVYGRLEPVTVTDPHSHTY..LPEVAATAWD.LGVPRELIPL.CQDDGSYYCVA.....EDGE........VVLWA..DGDL.TDESWDSVWVWARDVWL B0KR80_PSEPG/1-133 MEEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVYGSLEPVTCTDPQSHTY..LPEVAATAWD.AGVPRELIPL.CQDGDNYYCVE.....EDGT........VVLWDADEELV.GEDSWESVWHWARDVWL C1DFY0_AZOVD/1-133 MEDVIEQLRELNEPVPVPLELPDEDLLVEIEEQLLINLPFELREFLLKVSDVIYGSLEPVTVSDPQSHTY..LPEVAAVAWD.QGMPRDLVPL.CQVGDDYYAVD.....IEGQ........VLLWSSDSGEL.SDESWDSVWHWAKDVWL D1W447_9BACT/1-147 M.DYITRLKQ.NEEFEYWLE.ADNEQILYIENELNIKLPKQYKKFLSQCGMCNYGDVNILGIAKDENSVTYSVVEVTKQMRNEVNLSNDLIVL.NYEVGEYLTLYKVSENQELEDNTIYGANVRYDDTEKMYIGRTEKLFSSFEEYFEDFI D4RXT0_9FIRM/2-135 MFEDLDKFIAENQEEVLVTGGWTDDKISELEKQLSIAFREEVKIFIRKYGVLIGYGVEIVACGRN.GHSR..LVEDTLRFRK.NGLEKKYIVI.EGDGELAYCLNN....ETGE........IVNWGLDNLEVYPEAESLESFVLAQFKEG D0WEZ4_9ACTN/5-134 INDLMTRLGDKGSFTKVA...PTQEMLAEVEEKLGFIVPEQFLEYLNIYSHGGIG.FEILGVGFDGSISF..LEETLEYRED..GLPDSLLVI.ESCDEWLYCIDV....NTGE........VVSWSIDEDPRVEYACFDDYLVDRLNDAI C1D4A4_DEIDV/3-141 QEELFKRLRAGGVPAPLIPKLPDDREIDALEVLLETRLPPSYRAYLLTLSDVLAGAYWPLVIHHELTGGR..LLDQTRDLRA.IGLPQFLVPFETSQDGDAFCFDTRSAGPEYA........VVRWVHDDGSF.DTYRWPSFIAWVQDEWL A4SRI0_AERS4/1-119 MQND.............PFRIPTDDEIAIAERKLGITFHNDYRCFLKTGSDVANAIFEAAVILPGAGRLD..IFEMARIAWEIIGVSRDLLPF.IEDNGDYFCIS.....KTGE........VIYWSH.NGS..SNEKWPNMSAWHNQVCI B8CKE3_SHEPW/1-119 MEEF.............EIKIPSDIQIADAQKKLGFRFPKEYVAFIKSGYDLGDAPLEALEIVDPPSYAD..IYEALESARKFYDLPAELLPI.CEDSSDYYCIN.....DKGE........VVFWSH.NGI..TDEKWENVAIWRNHIVL A4Y9N5_SHEPC/1-119 MKIF.............EFVPPTDKEIEEAQLKLGFKFSPEYIEFIKSGYDLGDAPIEALEISNPPSHAD..IFETLANARKYFQLPSELCPI.CEDNSDYYCLN.....QKGE........VVFWSH.NGT..TSEKWANVTVWRNQMAT Q880E4_PSESM/5-136 IRDVVAELKSVRMSLPNAQRLPDDALIIAYERELGISFLDEYKFFAKEASDSIFNGKDALRLTVD.RNSPRELLNVVAEARE.QGVPKSWLPI.CEDNGNYYCLL.....EDGS........VIYWVH.DGR..SNETWPSLASWIKHAWI A6X428_OCHA4/5-137 IASIIEEINRIDDPTGRKLTLPDDALIHKYESATGFQFSEDYKEFLKNVSNAFVGYLSPLILNEEMGGVYGELLTTIQQARS.VGLPDNWLPI.CEDNGDYYCIA.....PDGL........IRFWSH.DGP..SDESWPNLATWADEVWI Q7M7B0_PHOLL/5-136 LNDVIEEIERLSDGQRNDVDLPDDELISQYEKEIGFEFSNDYKEVLKKISNIFYGTIDLLSVTRD.KKYYGELSQALSDARE.QGLPENLLPI.CEDNGSYYCID.....YDGK........IKYWTL.DGY..NEESWPDLASWIKQVWI C4S745_YERBE/5-136 IDKVINELKILSGGEILNIELPDDALIASYEKNIGFTFPEDYKKALKEVSNVFYGTVELLSVTKD.GNYYGELAQALRDAKE.QGLPEGWLPI.CEDNGSYYCLV.....PDGQ........IRYWTT.DGY..SDEKWPDLASWIKQVWI B2C6T5_ACIBA/7-138 LDNIIQELKELSGNSRLNIELPDDIFISAYERKIGFIFPKDYKKVLKEISNIFYGTIELASLTDE.KECYRGLSQILNDARE.QGLPEDWLPI.CEDNGSYYCLS.....PNHK........IRYWTA.DGY..SDEQWEDLADWIKQVWI Q0VNR5_ALCBS/1-133 MDDIVDMLRERHDGGLIALELPDEDRLVEIEEQLLISLPADYKAFLLSASDIVCGSLEPATVMDDYAHNF..LPEMAANSWN.QGLPRYLIPV.CETPNGIYAMS.....QEGE........VVLWQPEQGIN.EDEVWGSIWQWAREVWL Q2BMU0_9GAMM/1-131 MEDIIELLREKNAEVPVPLDLPDEDDLVEIEEQILISLPDEYKFFLLEVSDVVFGSIEPATVTDSSSHTF..LPEMAATAWD.RGMPREFIPI.CEHATGYYCIT.....QEAE........ILRWQFGDGI..VDE.WPSIWNWAKEVWL #=GC seq_cons Mc-lI-pLpphspssslsl-LPsp-pls-lEcplhlslPt-aKcaLhpsSDllhGslEPlolsDs.oHoY..LsEsss.Ahs.hGlP+-hlPI.CpssssaYCls.....p-Gp........VhhWs..cG...s-EpWtshapWsccVWl //